Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20934
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025841-1|ABF85741.1|  256|Drosophila melanogaster IP12016p pro...    29   7.3  
BT001632-1|AAN71387.1|  739|Drosophila melanogaster RE38584p pro...    29   7.3  
AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p pro...    28   9.7  
AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA...    28   9.7  

>BT025841-1|ABF85741.1|  256|Drosophila melanogaster IP12016p
           protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 563 INSNQYVSGSIPNLSPLHTIVHYSVLMSVCCL 468
           + S++ V G    L P+H I+ Y    S+C L
Sbjct: 163 VRSSEQVRGEHKELPPVHPIIRYKTGQSICSL 194


>BT001632-1|AAN71387.1|  739|Drosophila melanogaster RE38584p
           protein.
          Length = 739

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 275 RIDTSEPQ-KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDT 412
           RI+   P+     P G  ++  G   V D  D R  +NH +IE T T
Sbjct: 602 RINERSPRISCACPTGLKLMVDGLMCVEDLADQRPVKNHTQIEKTTT 648


>AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 648 SQLVGYFFIISWSTIACNIIFHHI 577
           SQLV YF +I  + +  N++FH++
Sbjct: 93  SQLVTYFLLIVGNWLLLNVVFHYV 116


>AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA
           protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 648 SQLVGYFFIISWSTIACNIIFHHI 577
           SQLV YF +I  + +  N++FH++
Sbjct: 93  SQLVTYFLLIVGNWLLLNVVFHYV 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,590,389
Number of Sequences: 53049
Number of extensions: 567404
Number of successful extensions: 1136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)