BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20934 (658 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical pr... 32 0.41 Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical pr... 28 5.1 U28731-6|AAA68295.1| 160|Caenorhabditis elegans Hypothetical pr... 28 5.1 Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical pr... 28 6.7 U21321-8|AAG00045.1| 296|Caenorhabditis elegans Hypothetical pr... 28 6.7 AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 28 6.7 AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 28 6.7 AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.7 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.7 >Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical protein C01G10.10 protein. Length = 421 Score = 31.9 bits (69), Expect = 0.41 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 563 INSNQYVSGSIPNLSPLHTIVHYSVLMSVC 474 + +NQY+ G+I LS H + VL+S+C Sbjct: 306 VAANQYIFGAISKLSAAHNVTTIKVLLSLC 335 >Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical protein F28C12.5 protein. Length = 339 Score = 28.3 bits (60), Expect = 5.1 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -3 Query: 638 LGISLLSAGVLLLVTSFFITSDEHHINSNQYVSGSIPNLSPLHTIVH-YSVLMSVCCLII 462 + +SLL +LL + SF+I H+ V P L+ ++ V+ ++ VCCL++ Sbjct: 151 IAVSLLVLQLLLTLVSFYIAYYGVHLAGYVPVCIHYPRLAVHYSTVNTVRTVVMVCCLVV 210 >U28731-6|AAA68295.1| 160|Caenorhabditis elegans Hypothetical protein F12A10.2 protein. Length = 160 Score = 28.3 bits (60), Expect = 5.1 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 Query: 526 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 618 FGI+P F WC +D ++D++ T A Sbjct: 78 FGIIPQLIDFSKSWCGADPERHDISKLHTVA 108 >Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical protein M7.13 protein. Length = 334 Score = 27.9 bits (59), Expect = 6.7 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -1 Query: 259 HRTQLLLAVITVVQNIKQLSFHIIGKL-FKISECKYFILINYNFKLTVLYVFSLRRPFFY 83 H Q + I+V+ N L F II K K+ KY ++ +F++ +V + PFFY Sbjct: 14 HGLQHISEAISVIVN-SFLVFLIINKSPKKLGSYKYLMIYISDFEILYSFVDFVVAPFFY 72 Query: 82 S 80 S Sbjct: 73 S 73 >U21321-8|AAG00045.1| 296|Caenorhabditis elegans Hypothetical protein ZK177.2 protein. Length = 296 Score = 27.9 bits (59), Expect = 6.7 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 Query: 526 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 618 FGI+P F WC +D ++D++ T A Sbjct: 218 FGIIPQLIDFSKSWCGADPERHDISRLHTVA 248 >AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein protein. Length = 2693 Score = 27.9 bits (59), Expect = 6.7 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -1 Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296 RL D G G+++L +I Y C+ NK+ A+ VC +R LL Sbjct: 703 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 751 >AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein protein. Length = 2708 Score = 27.9 bits (59), Expect = 6.7 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -1 Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296 RL D G G+++L +I Y C+ NK+ A+ VC +R LL Sbjct: 718 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 766 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 27.9 bits (59), Expect = 6.7 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -1 Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296 RL D G G+++L +I Y C+ NK+ A+ VC +R LL Sbjct: 16529 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16577 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 27.9 bits (59), Expect = 6.7 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -1 Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296 RL D G G+++L +I Y C+ NK+ A+ VC +R LL Sbjct: 16544 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16592 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,754,742 Number of Sequences: 27780 Number of extensions: 315016 Number of successful extensions: 738 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 738 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1465835342 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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