Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20934
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z93380-4|CAB07597.1|  339|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot...    28   6.7  
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot...    28   6.7  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   6.7  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   6.7  

>Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical
           protein C01G10.10 protein.
          Length = 421

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 563 INSNQYVSGSIPNLSPLHTIVHYSVLMSVC 474
           + +NQY+ G+I  LS  H +    VL+S+C
Sbjct: 306 VAANQYIFGAISKLSAAHNVTTIKVLLSLC 335


>Z93380-4|CAB07597.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.5 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -3

Query: 638 LGISLLSAGVLLLVTSFFITSDEHHINSNQYVSGSIPNLSPLHTIVH-YSVLMSVCCLII 462
           + +SLL   +LL + SF+I     H+     V    P L+  ++ V+    ++ VCCL++
Sbjct: 151 IAVSLLVLQLLLTLVSFYIAYYGVHLAGYVPVCIHYPRLAVHYSTVNTVRTVVMVCCLVV 210


>U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical
           protein F12A10.2 protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 526 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 618
           FGI+P    F   WC +D  ++D++   T A
Sbjct: 78  FGIIPQLIDFSKSWCGADPERHDISKLHTVA 108


>Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical
           protein M7.13 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 259 HRTQLLLAVITVVQNIKQLSFHIIGKL-FKISECKYFILINYNFKLTVLYVFSLRRPFFY 83
           H  Q +   I+V+ N   L F II K   K+   KY ++   +F++   +V  +  PFFY
Sbjct: 14  HGLQHISEAISVIVN-SFLVFLIINKSPKKLGSYKYLMIYISDFEILYSFVDFVVAPFFY 72

Query: 82  S 80
           S
Sbjct: 73  S 73


>U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical
           protein ZK177.2 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 526 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 618
           FGI+P    F   WC +D  ++D++   T A
Sbjct: 218 FGIIPQLIDFSKSWCGADPERHDISRLHTVA 248


>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
           protein.
          Length = 2693

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
           RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 703 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 751


>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
           protein.
          Length = 2708

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
           RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 718 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 766


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 430   RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
             RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 16529 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16577


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 430   RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
             RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 16544 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,754,742
Number of Sequences: 27780
Number of extensions: 315016
Number of successful extensions: 738
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)