Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20933
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 144 5e-35
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 144 7e-35
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 42 7e-04
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 38 0.011
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 35 0.060
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 33 0.18
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 32 0.56
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 32 0.56
10_08_0620 - 19321612-19323237 31 1.3
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 30 1.7
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 30 2.3
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 30 2.3
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 29 3.9
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 29 3.9
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 29 5.2
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 28 6.9
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 28 6.9
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 28 9.1
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 144 bits (350), Expect = 5e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +1
Query: 502 CLLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 681
C +NRQLIYN+PE+LFADAG++AIEHADFEGIERL LVTGG+I STFD+P+ VKLGHC +
Sbjct: 282 CFVNRQLIYNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCNV 341
Query: 682 IEEVLIGDESLIRFSGVALGSAC 750
IEE++IG++ LI FSGVA+G AC
Sbjct: 342 IEEIMIGEDKLIHFSGVAMGQAC 364
Score = 126 bits (303), Expect = 2e-29
Identities = 53/89 (59%), Positives = 75/89 (84%)
Frame = +2
Query: 257 GLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAE 436
G L++SFLDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+AE
Sbjct: 200 GSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAE 259
Query: 437 LEVAEKEKMKDKVNKILAHKCNVFLTDNL 523
+E AEK+KM++KV KI+ H N F+ L
Sbjct: 260 IEAAEKQKMREKVQKIIGHGINCFVNRQL 288
Score = 99.1 bits (236), Expect = 3e-21
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 6 TIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKL 185
TIIAG+R+A + A+ AL E + D+++N+++ R DL NIA TTLSSKILS KE+F +L
Sbjct: 118 TIIAGYRMAVECARNALLERTMDNKENIDK--FRSDLMNIAMTTLSSKILSQDKEYFAEL 175
Query: 186 AVDAVLRLKGSGNLKAIQIIKISEVFLKNHSWMKGSC*TKKL 311
AVDAVLRLKGS NL+AIQI+KI LK+ +G KK+
Sbjct: 176 AVDAVLRLKGSTNLEAIQILKIPGGSLKDSFLDEGFILDKKI 217
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 144 bits (349), Expect = 7e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +1
Query: 502 CLLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 681
C +NRQLIYN+PE+LFADAG++AIEHADFEGIERL LVTGG+I STFD+P+ VKLGHCK+
Sbjct: 259 CFVNRQLIYNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCKV 318
Query: 682 IEEVLIGDESLIRFSGVALGSAC 750
IEE++IG++ LI FSGV +G AC
Sbjct: 319 IEEIMIGEDRLIHFSGVEMGQAC 341
Score = 126 bits (303), Expect = 2e-29
Identities = 53/89 (59%), Positives = 75/89 (84%)
Frame = +2
Query: 257 GLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAE 436
G L++SFLDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+AE
Sbjct: 177 GSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAE 236
Query: 437 LEVAEKEKMKDKVNKILAHKCNVFLTDNL 523
+E AEK+KM++KV KI+ H N F+ L
Sbjct: 237 IEAAEKQKMREKVQKIIGHGINCFVNRQL 265
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/79 (54%), Positives = 51/79 (64%)
Frame = +3
Query: 75 HQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 254
H + R DL NIA TTLSSKILS KE+F LAVDAVLRLKGS NL+AIQI+K +
Sbjct: 116 HPMTIIADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLKGSTNLEAIQILKKT 175
Query: 255 EVFLKNHSWMKGSC*TKKL 311
LK+ +G KK+
Sbjct: 176 GGSLKDSFLDEGFILDKKI 194
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 684
+L+R I + Q FAD + E ++R+ TGG + ++ ++ LG C++
Sbjct: 292 VLSRLAIGDLATQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGTCEVF 351
Query: 685 EEVLIGDESLIRFSGVALG 741
EE +G+E FSG G
Sbjct: 352 EERQVGNERFNIFSGCPSG 370
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 TIIAGWRIASDAAKQALAE-ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
++I +R A A + + + A+ K+L E + L A TTLSSK++ KE F
Sbjct: 123 SLIRSYRTAGHLAIEKVKDLATSIEGKSLEEK--KELLAKCAATTLSSKLIGGEKEFFAS 180
Query: 183 LAVDAVLRLKGSGNLKAIQIIKISEVFLKNHSWMKGSC*TKKLVY 317
+ VDAVL + L + I K+ +++ + G K Y
Sbjct: 181 MVVDAVLAISNDDRLNLLGIKKVPGGTMRDSFLVNGVAFKKTFSY 225
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 544 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRF 723
L A AG++ + A +ERL L GGE V + D + LG L+ E +G+E
Sbjct: 323 LLARAGIIGLRRAKRRNMERLVLACGGEAVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFI 382
Query: 724 SGVALGSAC 750
V +C
Sbjct: 383 ENVKNPRSC 391
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 681
+L + + Y + LF + + + + +ER+ TG IV + D KLGHC L
Sbjct: 540 VLVEKSVSRYAQDLFLEKNISLVLNIKRPLLERISRCTGAHIVPSIDYVSSQKLGHCDL 598
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +1
Query: 547 FADAGVMAIEHADFEGIERLGLVTGGEIVSTF------DSPDKVKLGHCKLIEEVLIGDE 708
F +AG +A+ E + + TG +VSTF ++ D LGH + E I D+
Sbjct: 285 FVEAGAIAVRRVRKEDLRHVAKATGATMVSTFADMEGEETFDSSFLGHADEVVEERIADD 344
Query: 709 SLIRFSGVALGSA 747
+I G SA
Sbjct: 345 DVILVKGTKNTSA 357
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 114 LENIARTTLSSKILSNHKEHFTKLAVDAVLRLK 212
L N A+T++SSK++++ + F L VDAV +K
Sbjct: 133 LINCAKTSMSSKLINSDSDFFANLVVDAVQAVK 165
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 595 IERLGLVTGGEIVSTFDSPDKVKLGHCKL--IEEVL 696
++R+ TGG+I S+ D+ +LGHC +E+VL
Sbjct: 446 LDRISRCTGGQIASSIDNIASARLGHCDTFKVEKVL 481
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 320 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 460
Q + NA+I +A PMD ++ FG +K+D +I +E AEK K
Sbjct: 203 QAHRETNADITVAALPMDEERATAFG-LMKIDDEGRI--IEFAEKPK 246
>10_08_0620 - 19321612-19323237
Length = 541
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 550 ADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD---ESLIR 720
A A +M ++ + + IE + +++ + + KLGH L+EE+ +GD +++
Sbjct: 318 AKAKIMVVKDVERDEIEFITKTLNCMPIASIEHLREDKLGHAHLVEEISVGDGNNNKIVK 377
Query: 721 FSGV 732
+G+
Sbjct: 378 ITGI 381
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 681
LL + Y + L + + + + ++R+ T IV + D KLGHC+L
Sbjct: 520 LLVEHTVSRYAQDLLLEKNISLVLNIKRPLLDRIARCTNAHIVPSIDLLPSQKLGHCEL 578
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 704 SPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 579
S + TS T SG S T+SPPV +L++P A
Sbjct: 346 SGVATSLSTAHDDEITSSGSSGTSTVSPPVQSHALALPDPPA 387
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/61 (21%), Positives = 32/61 (52%)
Frame = +1
Query: 550 ADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSG 729
A A ++ ++ + + IE + ++ + + KLG+ L+EEV +G+ +++ G
Sbjct: 314 AKAKILVVKDVERDEIEFITKTLNCLPIANIEHFREDKLGYADLVEEVSVGESKIVKIMG 373
Query: 730 V 732
+
Sbjct: 374 I 374
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 93 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 203
E S R L A T L+SK++S + + LAVDA L
Sbjct: 150 ELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAAL 186
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 678
LL + + Y +QL A + + + +ER+ TG +I S+ ++ V+LG C+
Sbjct: 365 LLVEKSVPLYAQQLLAK-DISLVLNVKRSLLERISRCTGAQIASSIENVTSVRLGQCQ 421
>04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 725 EKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSAC 576
+ R S P S+++L +SG SN +T S P+ + +P KS C
Sbjct: 900 DSRTNRSEP-GPSTVSLPTVEERVSGSSNQETKSTPLAREGEQLPEKSCC 948
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 9 IIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLA 188
I G+ +AS A L S H+ + ++ L TTLSSKI++ K ++A
Sbjct: 129 IAEGYELASRIAFDHLEHIS--HKFEFSATNIE-PLVQTCMTTLSSKIVNRCKRTLAEIA 185
Query: 189 VDAVL 203
V AVL
Sbjct: 186 VKAVL 190
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 311 GVHQPKKVENANILIANTPMDTDKI--KVFGSTIKVDSMAKIAELEVAEKEKMK 466
G PKK+ L+ N P D+D + +VFG + + ++ KI + K K K
Sbjct: 253 GYMDPKKLNIEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPK 306
>01_01_0009 +
57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 509 RRHYICVLKSCSLCPSFSLSQLLPIQQSWPLNPL*LWNQTL*SCQ 375
+ HY CV+ + FS Q + ++ + +P+ +W L SC+
Sbjct: 575 KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCR 618
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 684
LL + + +Y ++L A + + + ++R+ +G +I S+ D+ +LG C+L
Sbjct: 400 LLVEKSVSSYAQELLAK-DISLVLNVKRPLLDRISRCSGAQIASSIDNIASARLGQCELF 458
Query: 685 E 687
+
Sbjct: 459 K 459
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,041,124
Number of Sequences: 37544
Number of extensions: 347220
Number of successful extensions: 928
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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