Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20933
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 135 4e-32
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 135 4e-32
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 135 4e-32
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 39 0.004
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 39 0.004
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 38 0.010
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 38 0.010
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 37 0.013
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 37 0.013
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 36 0.031
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 36 0.031
Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 30 2.0
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 30 2.0
U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine rece... 29 3.5
Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical pr... 28 6.2
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 28 6.2
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 28 6.2
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 28 6.2
D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation fact... 28 6.2
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 135 bits (326), Expect = 4e-32
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 508 LNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIE 687
+NRQLIYNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIE
Sbjct: 285 INRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIE 344
Query: 688 EVLIGDESLIRFSGVALGSAC 750
E++IG++ L+RFSGV LG AC
Sbjct: 345 EIMIGEDRLLRFSGVKLGEAC 365
Score = 130 bits (315), Expect = 8e-31
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = +2
Query: 257 GLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAE 436
G + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AE
Sbjct: 201 GSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAE 260
Query: 437 LEVAEKEKMKDKVNKILAHKCNVFLTDNL 523
LE AEK KMK+KV+KILAH CNVF+ L
Sbjct: 261 LEAAEKLKMKEKVDKILAHNCNVFINRQL 289
Score = 91.9 bits (218), Expect = 4e-19
Identities = 50/82 (60%), Positives = 61/82 (74%)
Frame = +3
Query: 3 QTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
QTII+G+R A A+++L ++S + N+ + DL IARTTL SKILS HKEHF +
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRD-----DLLKIARTTLGSKILSQHKEHFAQ 175
Query: 183 LAVDAVLRLKGSGNLKAIQIIK 248
LAVDAVLRLKGSGNL AIQIIK
Sbjct: 176 LAVDAVLRLKGSGNLDAIQIIK 197
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 135 bits (326), Expect = 4e-32
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 508 LNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIE 687
+NRQLIYNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIE
Sbjct: 285 INRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIE 344
Query: 688 EVLIGDESLIRFSGVALGSAC 750
E++IG++ L+RFSGV LG AC
Sbjct: 345 EIMIGEDRLLRFSGVKLGEAC 365
Score = 130 bits (315), Expect = 8e-31
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = +2
Query: 257 GLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAE 436
G + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AE
Sbjct: 201 GSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAE 260
Query: 437 LEVAEKEKMKDKVNKILAHKCNVFLTDNL 523
LE AEK KMK+KV+KILAH CNVF+ L
Sbjct: 261 LEAAEKLKMKEKVDKILAHNCNVFINRQL 289
Score = 91.9 bits (218), Expect = 4e-19
Identities = 50/82 (60%), Positives = 61/82 (74%)
Frame = +3
Query: 3 QTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
QTII+G+R A A+++L ++S + N+ + DL IARTTL SKILS HKEHF +
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRD-----DLLKIARTTLGSKILSQHKEHFAQ 175
Query: 183 LAVDAVLRLKGSGNLKAIQIIK 248
LAVDAVLRLKGSGNL AIQIIK
Sbjct: 176 LAVDAVLRLKGSGNLDAIQIIK 197
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 135 bits (326), Expect = 4e-32
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 508 LNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIE 687
+NRQLIYNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIE
Sbjct: 285 INRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIE 344
Query: 688 EVLIGDESLIRFSGVALGSAC 750
E++IG++ L+RFSGV LG AC
Sbjct: 345 EIMIGEDRLLRFSGVKLGEAC 365
Score = 130 bits (315), Expect = 8e-31
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = +2
Query: 257 GLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAE 436
G + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AE
Sbjct: 201 GSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAE 260
Query: 437 LEVAEKEKMKDKVNKILAHKCNVFLTDNL 523
LE AEK KMK+KV+KILAH CNVF+ L
Sbjct: 261 LEAAEKLKMKEKVDKILAHNCNVFINRQL 289
Score = 91.9 bits (218), Expect = 4e-19
Identities = 50/82 (60%), Positives = 61/82 (74%)
Frame = +3
Query: 3 QTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
QTII+G+R A A+++L ++S + N+ + DL IARTTL SKILS HKEHF +
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRD-----DLLKIARTTLGSKILSQHKEHFAQ 175
Query: 183 LAVDAVLRLKGSGNLKAIQIIK 248
LAVDAVLRLKGSGNL AIQIIK
Sbjct: 176 LAVDAVLRLKGSGNLDAIQIIK 197
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 544 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDE 708
L A G++A+ A +ERL L GGE V++ D LG L+ E +G+E
Sbjct: 308 LLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLGEE 362
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 78 QKNLNEASLRVDL-ENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 254
+K EA + DL + RT L +K+ +H T+ VDAVL ++ G + +++
Sbjct: 135 EKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKM 194
Query: 255 EV 260
E+
Sbjct: 195 EM 196
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 544 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDE 708
L A G++A+ A +ERL L GGE V++ D LG L+ E +G+E
Sbjct: 308 LLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLGEE 362
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 78 QKNLNEASLRVDL-ENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 254
+K EA + DL + RT L +K+ +H T+ VDAVL ++ G + +++
Sbjct: 135 EKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKM 194
Query: 255 EV 260
E+
Sbjct: 195 EM 196
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Frame = +3
Query: 48 QALAEASFDHQKNLNEASLRVDLEN------IARTTLSSKILSNHKEHFTKLAVDAVLRL 209
++ A+ + +K L+E S VDL N +A T+L+SK++S H +AV+AV ++
Sbjct: 134 ESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
Query: 210 KGSG-----NLKAIQIIK 248
S NLK I+IIK
Sbjct: 194 INSENDSNVNLKMIKIIK 211
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 562 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLI-GDESLIRFSGV 732
+M I+ + E IE + G V++ D + LG+ L+EE+ GD +I+ +GV
Sbjct: 322 IMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGV 379
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Frame = +3
Query: 48 QALAEASFDHQKNLNEASLRVDLEN------IARTTLSSKILSNHKEHFTKLAVDAVLRL 209
++ A+ + +K L+E S VDL N +A T+L+SK++S H +AV+AV ++
Sbjct: 134 ESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
Query: 210 KGSG-----NLKAIQIIK 248
S NLK I+IIK
Sbjct: 194 INSENDSNVNLKMIKIIK 211
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 562 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLI-GDESLIRFSGV 732
+M I+ + E IE + G V++ D + LG+ L+EE+ GD +I+ +GV
Sbjct: 322 IMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGV 379
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/75 (36%), Positives = 34/75 (45%)
Frame = +3
Query: 93 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISEVFLKN 272
E LR L A TTLSSK++S + F + VDAV L L I I K++ L
Sbjct: 146 ETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIGIKKVNGGNLHE 205
Query: 273 HSWMKGSC*TKKLVY 317
+KG K Y
Sbjct: 206 SRLIKGVAFQKAFSY 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 684
+L++ I + Q FAD + + ++RL GG +++T D LG C
Sbjct: 287 VLSKLPIGDVATQWFADRDMFCAGRIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKF 346
Query: 685 EEVLIGDESLIRFSGVALGSAC 750
E +G E F + AC
Sbjct: 347 YEQQVGSERYNFFEDCSKAQAC 368
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/75 (36%), Positives = 34/75 (45%)
Frame = +3
Query: 93 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISEVFLKN 272
E LR L A TTLSSK++S + F + VDAV L L I I K++ L
Sbjct: 146 ETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIGIKKVNGGNLHE 205
Query: 273 HSWMKGSC*TKKLVY 317
+KG K Y
Sbjct: 206 SRLIKGVAFQKAFSY 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 505 LLNRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 684
+L++ I + Q FAD + + ++RL GG +++T D LG C
Sbjct: 287 VLSKLPIGDVATQWFADRDMFCAGRIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKF 346
Query: 685 EEVLIGDESLIRFSGVALGSAC 750
E +G E F + AC
Sbjct: 347 YEQQVGSERYNFFEDCSKAQAC 368
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 TIIAGWRIASDAAKQALAE-ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
TII G+R+A A + ++E SF +++ R + N A+T++SSKI+ + F +
Sbjct: 120 TIINGYRLACKEAVKYISENISFT-----SDSIGRQSVVNAAKTSMSSKIIGPDADFFGE 174
Query: 183 LAVDAVLRLKGSGNLKAIQIIKISEVFLKNH 275
L VDA ++ N K I V LK H
Sbjct: 175 LVVDAAEAVRVENNGKVTYPINAVNV-LKAH 204
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 TIIAGWRIASDAAKQALAE-ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTK 182
TII G+R+A A + ++E SF +++ R + N A+T++SSKI+ + F +
Sbjct: 120 TIINGYRLACKEAVKYISENISFT-----SDSIGRQSVVNAAKTSMSSKIIGPDADFFGE 174
Query: 183 LAVDAVLRLKGSGNLKAIQIIKISEVFLKNH 275
L VDA ++ N K I V LK H
Sbjct: 175 LVVDAAEAVRVENNGKVTYPINAVNV-LKAH 204
>Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical
protein F15H10.6 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 60 EASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQ 239
E +DH + L E +LR L+ + R S+I+ NH + + + R N K +
Sbjct: 163 EVKYDHLEELLEQTLRTSLQLLIRNEELSEIILNH-----PIILSKIKRRIPIDNSKLLS 217
Query: 240 IIKISEVF 263
II + EVF
Sbjct: 218 IITVKEVF 225
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Frame = +2
Query: 167 RAFHKISS*CSFAFERIW*FKSYSN-YQNI*GLLEESFLDEGFLLNKKVGVHQPKKVENA 343
R H + SF +RI K N QN+ +++ G + KK+G QP ++E
Sbjct: 212 RGHHAMEKKISFLGDRIE--KHLRNDIQNLNKKIDKKISTFGERIEKKIGTIQPDELETV 269
Query: 344 NILIANTPMDTDKI---------KVFGSTIKVDSM-AKIAELEVAEKEKMKDKVNKIL 487
+++ T +KI K S+I V M AK+ + E+E+ +KV+ IL
Sbjct: 270 KVMLNKTNEKIEKIHETIIDLQKKTDNSSIAVKQMKAKMDLRAIREQEERTEKVSVIL 327
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 105 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 203
R L A+T+L SKI++ F ++AVDAVL
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVL 193
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 105 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 203
R L A+T+L SKI++ F ++AVDAVL
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVL 193
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 105 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVL 203
R L A+T+L SKI++ F ++AVDAVL
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVL 193
>U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 31 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2
Query: 387 LILSVSIGVFAIRMLAFSTFFG*CTPTFLFS 295
+I SV + VFAIR L + F CT T LFS
Sbjct: 32 IISSVFLTVFAIRKLWKNNIFPNCTRTLLFS 62
>Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical
protein F55C5.5 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 266 EESFLDEGFLLNKKVGVHQPKKVENANIL 352
E + L + F+LN VH+ K NANIL
Sbjct: 278 ETALLRQAFMLNPSQSVHEYLKSHNANIL 306
>Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical
protein T25G3.3 protein.
Length = 513
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -3
Query: 611 KPSLSIPSKSACSIAITPASANNCSG*LYISCLLRRHYI--CVLKSCSLCPSF 459
KP++ + + C +AI P AN CSG L + C + C C +
Sbjct: 7 KPTVGLIACCECGVAIEPNPANMCSGCLRSRVDITEGITRQCTIYMCKFCDRY 59
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 138 LSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISEVFLKNHSW 281
+S+ + +EHF +++ V S NL+ I+ + F K H W
Sbjct: 42 VSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIERPDLGVTFTKLHCW 89
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 138 LSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISEVFLKNHSW 281
+S+ + +EHF +++ V S NL+ I+ + F K H W
Sbjct: 42 VSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIERPDLGVTFTKLHCW 89
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 138 LSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISEVFLKNHSW 281
+S+ + +EHF +++ V S NL+ I+ + F K H W
Sbjct: 42 VSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIERPDLGVTFTKLHCW 89
>D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation factor
Ts homologue protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 266 EESFLDEGFLLNKKVGVHQPKKVENANIL 352
E + L + F+LN VH+ K NANIL
Sbjct: 278 ETALLRQAFMLNPSQSVHEYLKSHNANIL 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,113,122
Number of Sequences: 27780
Number of extensions: 332939
Number of successful extensions: 961
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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