Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20933
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   7.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   7.1  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    22   7.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   7.1  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    22   7.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.3  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 608 PSLSIPSKSACSIAITPASANNCSG*LYISCLLRRHY 498
           P+ S P  S  S + +PA+    S   Y+S     H+
Sbjct: 64  PTGSSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHH 100


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 600 KAWLGHWRGNCVNI 641
           + +L +WRGN  N+
Sbjct: 67  QGFLSYWRGNLANV 80


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 665 SFTLSGESNVDTIS 624
           S ++ GESNVD +S
Sbjct: 27  SISVKGESNVDVVS 40


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 600 KAWLGHWRGNCVNI 641
           + +L +WRGN  N+
Sbjct: 67  QGFLSYWRGNLANV 80


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 665 SFTLSGESNVDTIS 624
           S ++ GESNVD +S
Sbjct: 27  SISVKGESNVDVVS 40


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 300 TKKLVYINQRK*KMLTSLLQTHQWTL 377
           T+ L+Y  +R+ K L  L+    W L
Sbjct: 141 TQPLIYSRRRRSKRLAGLMIVAVWVL 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,480
Number of Sequences: 438
Number of extensions: 3856
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)