Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20932
         (587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6I9T5 Cluster: MAB21L1 protein; n=47; Eumetazoa|Rep: M...   154   2e-36
UniRef50_Q60YZ0 Cluster: Putative uncharacterized protein CBG180...   102   5e-21
UniRef50_A6VS95 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_UPI000023F6F3 Cluster: hypothetical protein FG11581.1; ...    33   3.7  
UniRef50_A6SSX7 Cluster: Putative uncharacterized protein; n=2; ...    33   4.9  
UniRef50_Q6I635 Cluster: Putative uncharacterized protein OJ1263...    33   6.5  
UniRef50_Q6CSE5 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    33   6.5  
UniRef50_UPI000023E1F3 Cluster: hypothetical protein FG05563.1; ...    32   8.6  
UniRef50_Q5FR13 Cluster: Putative DnaJ-like protein; n=1; Glucon...    32   8.6  
UniRef50_A3M6L6 Cluster: Putative membrane protein; n=1; Acineto...    32   8.6  

>UniRef50_Q6I9T5 Cluster: MAB21L1 protein; n=47; Eumetazoa|Rep:
           MAB21L1 protein - Homo sapiens (Human)
          Length = 359

 Score =  154 bits (373), Expect = 2e-36
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = +2

Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
           L + + R++GLEV+SP EFE+V+YLNQMGV NFVDDGSLPGCAVLKLSDGRKRSMSLWVE
Sbjct: 56  LNEMDNRYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 115

Query: 437 FITASGYLSARKIRSRFQTLVAQAV 511
           FITASGYLSARKIRSR QTLVAQAV
Sbjct: 116 FITASGYLSARKIRSRLQTLVAQAV 140



 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 93  MMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
           M+AAQ+KLVY +NK+YNE+   RKA I KTI EVC++V DVLKEVE+QEPRFIS
Sbjct: 1   MIAAQAKLVYHLNKYYNEKCQARKAAIAKTIREVCKVVSDVLKEVEVQEPRFIS 54



 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +1

Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
           DKCSYRD VKM+A+T+EVKLRIR+R
Sbjct: 141 DKCSYRDVVKMVADTSEVKLRIRDR 165


>UniRef50_Q60YZ0 Cluster: Putative uncharacterized protein CBG18030;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG18030 - Caenorhabditis
           briggsae
          Length = 319

 Score =  102 bits (245), Expect = 5e-21
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = +2

Query: 272 GRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFI 442
           GRFDG+ V SP E+E V+YLNQMGV NFVDDG++ GCAVLKLSDGRKRSMSLWVEFI
Sbjct: 62  GRFDGIVVHSPSEYEAVLYLNQMGVFNFVDDGTIQGCAVLKLSDGRKRSMSLWVEFI 118



 Score = 76.6 bits (180), Expect = 4e-13
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = +3

Query: 93  MMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFISLSPTTT 272
           M+     +VYQ+N FYNE+V  RKA++TK +H + ++VQ++LKEVE QEPRFI+    T+
Sbjct: 1   MLGHNQNVVYQVNTFYNEKVQQRKARVTKNVHRIAKVVQEILKEVEAQEPRFINTLTETS 60

Query: 273 AG 278
            G
Sbjct: 61  TG 62


>UniRef50_A6VS95 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MWYL1|Rep: Putative uncharacterized
           protein - Marinomonas sp. MWYL1
          Length = 215

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 236 GAEVHIPLTD-YNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAV 388
           G E HI + D YN R+ G  V    E +IV+  ++   ++F+D  S+   A+
Sbjct: 28  GTEFHITIADRYNNRYSGFFVKFDSELKIVLLTDKEHEISFIDTDSIVNIAI 79


>UniRef50_UPI000023F6F3 Cluster: hypothetical protein FG11581.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG11581.1 - Gibberella zeae PH-1
          Length = 465

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
 Frame = +2

Query: 80  RSPRDDGGPI*TSLSNE*VLQRESRQQEGANNKNDT*SVSDSAR----CTQGGGVAGAEV 247
           R P      I   +S+  ++ R    Q+   NKN   S+ +  R      + G  A    
Sbjct: 202 RKPPVQSATIALPMSDTPIINRNKEMQKKGGNKNKRSSLGNRGRRASSLIESGQTAIPHR 261

Query: 248 HIPLTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSL 427
            +  TD+    +   ++ P  F++ + LN+  +  F+ D ++   A+   ++ R R++  
Sbjct: 262 DVNPTDFYKHIEAEGLIEPRHFDL-LDLNEGKIRGFLADETVSFDAIRSQTESRLRTIQS 320

Query: 428 WVEF 439
            +EF
Sbjct: 321 LLEF 324


>UniRef50_A6SSX7 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 587

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = -2

Query: 454 SRSGDELDPEGHGTLPPVAQFQDGAARERA---VVHEVQHSHLIEIDDDLELVGRDHFEA 284
           SR+G E++ +   T PP+A+  DG  ++ A    + E  +    E DDDL L   +  +A
Sbjct: 116 SRAGVEIEEDKADTTPPLAE-GDGVVKKHAAGFAIDEAVNDDDEEDDDDLALAALESLDA 174

Query: 283 VE 278
           +E
Sbjct: 175 IE 176


>UniRef50_Q6I635 Cluster: Putative uncharacterized protein
           OJ1263_E10.2; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1263_E10.2 - Oryza sativa subsp. japonica (Rice)
          Length = 109

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +1

Query: 154 PTGRRK*QKRYMKCVG*CKMYSRRWSCRSRGSYPSHRLQRQVRRPR 291
           P   R  Q+ ++ C G   + +RR SC  RG   +H L+RQ RRPR
Sbjct: 2   PPETRLQQRAWLPCAGHNVLSARRKSC--RGWAVAHLLRRQPRRPR 45


>UniRef50_Q6CSE5 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 944

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +2

Query: 35  PNHELRVNSNTATMSRSPRDDGGP-I*TSLSNE*VLQRESRQQEGANNKNDT*SVSDSAR 211
           P  E RV+S   T + + +D G P I TS       + E  +QE  N+ N    +S S+ 
Sbjct: 44  PELEYRVSSRQGTGTATDQDTGTPYIATSSIKTETTKSEQGEQEYGNDDNQETQLSHSSL 103

Query: 212 CTQGGGVAGAEVHIPLTDYNGRFDGLEVVS 301
                  AGA V      Y+   D ++V +
Sbjct: 104 SEDDTTTAGAAVEEEDDSYSFTDDSMDVTN 133


>UniRef50_UPI000023E1F3 Cluster: hypothetical protein FG05563.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05563.1 - Gibberella zeae PH-1
          Length = 531

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 453 PEAVMNSTQRDMERFLPSLSFKTAQPGS--EPSSTKFSTPI 337
           P   +N T      +LPS S +T  PGS  EP+S K  +P+
Sbjct: 93  PVVPLNLTPPSAAHYLPSCSVRTRDPGSHVEPTSPKLQSPL 133


>UniRef50_Q5FR13 Cluster: Putative DnaJ-like protein; n=1;
           Gluconobacter oxydans|Rep: Putative DnaJ-like protein -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 270

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 427 LGRVHHRFGIPIGAQDTVALPNV-GSSGRDKCSYRDCVKMIAETTEVKLRIRER 585
           L RVH  FG+P GA D     N   +SG +  +YR  + +    T+ ++R+R R
Sbjct: 174 LQRVHRAFGLPPGAWDRAESGNSRAASGNEPDAYR-ILGITRSATDTEIRVRWR 226


>UniRef50_A3M6L6 Cluster: Putative membrane protein; n=1;
           Acinetobacter baumannii ATCC 17978|Rep: Putative
           membrane protein - Acinetobacter baumannii (strain ATCC
           17978 / NCDC KC 755)
          Length = 307

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = +2

Query: 290 EVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSAR 469
           E++ PHE      L Q G    +  G + G AV+  SDG    +S+ V  I   GYL +R
Sbjct: 40  EILKPHELMSGNALFQSGTSMAILFGMILGGAVIASSDGNLLWISITVVAIACIGYLFSR 99

Query: 470 KI 475
            I
Sbjct: 100 FI 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,255,405
Number of Sequences: 1657284
Number of extensions: 10558694
Number of successful extensions: 33827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33821
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)