Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20932
(587 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128466-1|AAM75059.1| 365|Drosophila melanogaster RE21580p pro... 166 2e-41
AE014298-831|AAF46112.2| 365|Drosophila melanogaster CG4746-PA ... 166 2e-41
AF214524-1|AAF24503.1| 359|Drosophila melanogaster mab-21 protein. 165 3e-41
AF145667-1|AAD38642.1| 368|Drosophila melanogaster BcDNA.GH1141... 157 1e-38
AE014298-830|AAF46111.1| 368|Drosophila melanogaster CG4766-PA ... 157 1e-38
BT011456-1|AAR99114.1| 276|Drosophila melanogaster RE34459p pro... 30 2.7
AE013599-956|AAF58883.1| 276|Drosophila melanogaster CG1675-PA ... 30 2.7
AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA... 29 3.5
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 6.2
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 29 6.2
AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-P... 29 6.2
BT025047-1|ABE73218.1| 775|Drosophila melanogaster IP16401p pro... 28 8.2
BT001322-1|AAN71077.1| 701|Drosophila melanogaster AT16369p pro... 28 8.2
>AY128466-1|AAM75059.1| 365|Drosophila melanogaster RE21580p
protein.
Length = 365
Score = 166 bits (404), Expect = 2e-41
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +2
Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
L DYNGRF+GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVE
Sbjct: 62 LNDYNGRFEGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVE 121
Query: 437 FITASGYLSARKIRSRFQTLVAQA 508
FITASGYLSARKIRSRFQTLVAQA
Sbjct: 122 FITASGYLSARKIRSRFQTLVAQA 145
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 78 LVPPEMMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
LVP +M+AAQSK+VYQMNK+ +RV RKAQI K I EVCRIVQDVLKEVE+QEPRFIS
Sbjct: 2 LVPSDMIAAQSKMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFIS 60
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
DKC+YRD VKMIA+TTEVKLRIRER
Sbjct: 147 DKCAYRDIVKMIADTTEVKLRIRER 171
>AE014298-831|AAF46112.2| 365|Drosophila melanogaster CG4746-PA
protein.
Length = 365
Score = 166 bits (404), Expect = 2e-41
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +2
Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
L DYNGRF+GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVE
Sbjct: 62 LNDYNGRFEGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVE 121
Query: 437 FITASGYLSARKIRSRFQTLVAQA 508
FITASGYLSARKIRSRFQTLVAQA
Sbjct: 122 FITASGYLSARKIRSRFQTLVAQA 145
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 78 LVPPEMMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
LVP +M+AAQSK+VYQMNK+ +RV RKAQI K I EVCRIVQDVLKEVE+QEPRFIS
Sbjct: 2 LVPSDMIAAQSKMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFIS 60
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
DKC+YRD VKMIA+TTEVKLRIRER
Sbjct: 147 DKCAYRDIVKMIADTTEVKLRIRER 171
>AF214524-1|AAF24503.1| 359|Drosophila melanogaster mab-21 protein.
Length = 359
Score = 165 bits (402), Expect = 3e-41
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +2
Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
L DYNGRF GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVE
Sbjct: 56 LNDYNGRFQGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVE 115
Query: 437 FITASGYLSARKIRSRFQTLVAQA 508
FITASGYLSARKIRSRFQTLVAQA
Sbjct: 116 FITASGYLSARKIRSRFQTLVAQA 139
Score = 85.8 bits (203), Expect = 4e-17
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +3
Query: 93 MMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
M+AAQSK+VYQMNK+ +RV RKAQI K I EVCRIVQDVLKEVE+QEPRFIS
Sbjct: 1 MIAAQSKMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFIS 54
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
DKC+YRD VKMIA+TTEVKLRIRER
Sbjct: 141 DKCAYRDIVKMIADTTEVKLRIRER 165
>AF145667-1|AAD38642.1| 368|Drosophila melanogaster BcDNA.GH11415
protein.
Length = 368
Score = 157 bits (380), Expect = 1e-38
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +2
Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
L + NGRF+G+EV+SP+EFEIV+YLNQMGV NFVDDG+LPGCAVLKLSDGRKRSMSLWVE
Sbjct: 62 LVECNGRFEGVEVISPNEFEIVLYLNQMGVFNFVDDGTLPGCAVLKLSDGRKRSMSLWVE 121
Query: 437 FITASGYLSARKIRSRFQTLVAQA 508
FITASGYLS+RKIR+RFQTLVAQA
Sbjct: 122 FITASGYLSSRKIRARFQTLVAQA 145
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +3
Query: 78 LVPPEMMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
LVPP+MMAAQ+++VYQMN+F ERV R + I E+C+IVQD+LKEVELQEPRFIS
Sbjct: 2 LVPPDMMAAQTRMVYQMNRFCTERVQARMYKTATAIREICKIVQDILKEVELQEPRFIS 60
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
DK YRD VKM+ +T+EVKLRIRER
Sbjct: 147 DKSVYRDMVKMVGDTSEVKLRIRER 171
>AE014298-830|AAF46111.1| 368|Drosophila melanogaster CG4766-PA
protein.
Length = 368
Score = 157 bits (380), Expect = 1e-38
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +2
Query: 257 LTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVE 436
L + NGRF+G+EV+SP+EFEIV+YLNQMGV NFVDDG+LPGCAVLKLSDGRKRSMSLWVE
Sbjct: 62 LVECNGRFEGVEVISPNEFEIVLYLNQMGVFNFVDDGTLPGCAVLKLSDGRKRSMSLWVE 121
Query: 437 FITASGYLSARKIRSRFQTLVAQA 508
FITASGYLS+RKIR+RFQTLVAQA
Sbjct: 122 FITASGYLSSRKIRARFQTLVAQA 145
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +3
Query: 78 LVPPEMMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFIS 254
LVPP+MMAAQ+++VYQMN+F ERV R + I E+C+IVQD+LKEVELQEPRFIS
Sbjct: 2 LVPPDMMAAQTRMVYQMNRFCTERVQARMYKTATAIREICKIVQDILKEVELQEPRFIS 60
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 511 DKCSYRDCVKMIAETTEVKLRIRER 585
DK YRD VKM+ +T+EVKLRIRER
Sbjct: 147 DKSVYRDMVKMVGDTSEVKLRIRER 171
>BT011456-1|AAR99114.1| 276|Drosophila melanogaster RE34459p
protein.
Length = 276
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 480 DRILRADRYPEAVMNST-QRDMERFLPSLSFKTAQPGSEPSSTKFSTP 340
D++ D + V S+ Q+D S KTA P S SSTK + P
Sbjct: 11 DKLQMMDETTDKVQGSSKQKDDSSIAASSDAKTASPSSSDSSTKVAAP 58
>AE013599-956|AAF58883.1| 276|Drosophila melanogaster CG1675-PA
protein.
Length = 276
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 480 DRILRADRYPEAVMNST-QRDMERFLPSLSFKTAQPGSEPSSTKFSTP 340
D++ D + V S+ Q+D S KTA P S SSTK + P
Sbjct: 11 DKLQMMDETTDKVQGSSKQKDDSSIAASSDAKTASPSSSDSSTKVAAP 58
>AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA
protein.
Length = 1095
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 92 LWGNETWWLYWNSRGAHGSGAAVHAR 15
LW + WL W+S G GSG V A+
Sbjct: 10 LWPSFLLWLTWSSGGGGGSGVGVSAQ 35
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 831 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 866
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 379 ARERAVVHEVQHSHLI-EIDDDLELVGRDHFEAVEP 275
AR A + H I E+DD L+ +G++ F A+EP
Sbjct: 888 ARRLAALQACVELHRIGELDDQLQPIGKEGFRALEP 923
>AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-PA
protein.
Length = 4012
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 457 VSRSGDELDPEGHGTLPPVAQFQDGAARERAVVHEVQHSHLIEIDDDLELVGRDHFE-AV 281
+ + D L PEG +PP ++ G RE+ V H+ + + ++ V ++ ++ V
Sbjct: 680 IKKPEDNLRPEGDFIVPPKEPYKPGEKREKIV-----HTDNLRTEGEMTFVEKEEYQYTV 734
Query: 280 EPAVV 266
P V
Sbjct: 735 RPGYV 739
>BT025047-1|ABE73218.1| 775|Drosophila melanogaster IP16401p
protein.
Length = 775
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 453 PEAVMNSTQRDMERFLPSLSFKTAQPGSEPSSTKFSTP 340
PEAV + TQ D + S S ++ PGS P S+ S+P
Sbjct: 638 PEAVTSKTQADE---VSSSSNSSSSPGSSPGSSPGSSP 672
>BT001322-1|AAN71077.1| 701|Drosophila melanogaster AT16369p
protein.
Length = 701
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 453 PEAVMNSTQRDMERFLPSLSFKTAQPGSEPSSTKFSTP 340
PEAV + TQ D + S S ++ PGS P S+ S+P
Sbjct: 580 PEAVTSKTQADE---VSSSSNSSSSPGSSPGSSPGSSP 614
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,823,031
Number of Sequences: 53049
Number of extensions: 499105
Number of successful extensions: 1638
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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