Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20931
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 143 4e-33
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 138 1e-31
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 135 1e-30
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 131 2e-29
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 131 2e-29
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 126 6e-28
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 126 8e-28
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 5e-26
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 118 2e-25
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 115 1e-24
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 114 2e-24
UniRef50_UPI00005644BE Cluster: UPI00005644BE related cluster; n... 112 8e-24
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 111 2e-23
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 104 2e-21
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 104 3e-21
UniRef50_UPI0000E25CDC Cluster: PREDICTED: hypothetical protein;... 103 6e-21
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 101 2e-20
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 97 5e-19
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 96 7e-19
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 96 7e-19
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 95 2e-18
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 92 1e-17
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 91 3e-17
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 91 3e-17
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 91 3e-17
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 91 3e-17
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 90 5e-17
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 88 2e-16
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 87 6e-16
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 6e-16
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 87 6e-16
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 86 7e-16
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 85 1e-15
UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain, p... 85 2e-15
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 84 3e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 84 4e-15
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 83 5e-15
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 83 7e-15
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 83 9e-15
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 83 9e-15
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 82 2e-14
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 81 3e-14
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 81 4e-14
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 80 5e-14
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 79 9e-14
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 79 1e-13
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 79 1e-13
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 79 1e-13
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 79 1e-13
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 79 1e-13
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 78 2e-13
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 78 3e-13
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 78 3e-13
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 77 3e-13
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 77 3e-13
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 77 3e-13
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 77 3e-13
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 77 5e-13
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 77 5e-13
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 77 5e-13
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 6e-13
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 77 6e-13
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 76 8e-13
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 76 8e-13
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 76 1e-12
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 76 1e-12
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 76 1e-12
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 76 1e-12
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 1e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 75 1e-12
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 1e-12
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 75 2e-12
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 75 2e-12
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 75 2e-12
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 75 2e-12
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 75 2e-12
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 75 2e-12
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 75 2e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 75 2e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 75 2e-12
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 75 2e-12
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 2e-12
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 74 3e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 74 3e-12
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 74 3e-12
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 74 3e-12
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 74 3e-12
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 74 3e-12
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 74 4e-12
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 4e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 74 4e-12
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 74 4e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 73 6e-12
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 73 6e-12
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 73 6e-12
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 73 6e-12
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 73 6e-12
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 73 6e-12
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 73 6e-12
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 73 7e-12
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 73 7e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 73 1e-11
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 73 1e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 73 1e-11
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 73 1e-11
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 73 1e-11
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 72 1e-11
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 72 1e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 72 2e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 72 2e-11
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 72 2e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 72 2e-11
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 71 2e-11
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 71 2e-11
UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 71 2e-11
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 71 2e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 71 3e-11
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 71 3e-11
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 71 3e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 4e-11
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 71 4e-11
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 71 4e-11
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 71 4e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 70 5e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 70 5e-11
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 70 5e-11
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 70 5e-11
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 5e-11
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 70 7e-11
UniRef50_A5KDY2 Cluster: RNA helicase, putative; n=1; Plasmodium... 70 7e-11
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 7e-11
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 69 9e-11
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 69 9e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 69 9e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 9e-11
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 69 9e-11
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 69 1e-10
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 1e-10
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 69 1e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 69 2e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 69 2e-10
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 69 2e-10
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 69 2e-10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 69 2e-10
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 68 2e-10
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 68 2e-10
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 68 2e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 68 2e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 68 3e-10
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 68 3e-10
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 3e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 68 3e-10
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 67 4e-10
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 67 4e-10
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 67 4e-10
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 67 5e-10
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 67 5e-10
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 67 5e-10
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 67 5e-10
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 66 6e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 66 6e-10
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 66 6e-10
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 66 6e-10
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 6e-10
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 66 6e-10
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 66 9e-10
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 66 9e-10
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 66 9e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 66 9e-10
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 9e-10
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 66 1e-09
UniRef50_UPI00003C10F5 Cluster: hypothetical protein UM00313.1; ... 66 1e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 66 1e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 1e-09
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 66 1e-09
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 66 1e-09
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 66 1e-09
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 66 1e-09
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 66 1e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 66 1e-09
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 66 1e-09
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 66 1e-09
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 65 1e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 65 1e-09
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 65 1e-09
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 65 1e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 2e-09
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 65 2e-09
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 65 2e-09
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 64 3e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 64 3e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 3e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 64 3e-09
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 64 3e-09
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 3e-09
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 64 3e-09
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 64 3e-09
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 3e-09
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 64 3e-09
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 3e-09
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 64 3e-09
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 64 5e-09
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 64 5e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 64 5e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 64 5e-09
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 64 5e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 64 5e-09
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 64 5e-09
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 63 6e-09
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 63 6e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 63 6e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 63 6e-09
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 63 6e-09
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 63 6e-09
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 63 6e-09
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 63 6e-09
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 63 6e-09
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 63 6e-09
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 63 6e-09
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 8e-09
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 63 8e-09
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 63 8e-09
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 63 8e-09
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 63 8e-09
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 63 8e-09
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 8e-09
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 63 8e-09
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 63 8e-09
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 62 1e-08
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 62 1e-08
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 62 1e-08
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 62 1e-08
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 62 1e-08
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 1e-08
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 62 1e-08
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 1e-08
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q5DEI3 Cluster: SJCHGC09342 protein; n=1; Schistosoma j... 62 1e-08
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 62 1e-08
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 62 1e-08
UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 62 2e-08
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 62 2e-08
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 62 2e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 62 2e-08
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 62 2e-08
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 62 2e-08
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 62 2e-08
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 62 2e-08
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 61 2e-08
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 61 2e-08
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 61 2e-08
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 61 2e-08
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 61 2e-08
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 61 2e-08
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 61 2e-08
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 2e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 2e-08
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 61 2e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 61 2e-08
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 61 3e-08
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 61 3e-08
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 3e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 61 3e-08
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 61 3e-08
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 3e-08
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 60 4e-08
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 60 4e-08
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 60 4e-08
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 60 4e-08
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 60 4e-08
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 60 4e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 60 4e-08
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 60 6e-08
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 60 6e-08
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 60 6e-08
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 6e-08
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 60 6e-08
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 60 6e-08
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 6e-08
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 60 6e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 7e-08
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 7e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 60 7e-08
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 60 7e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 60 7e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 60 7e-08
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 60 7e-08
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 60 7e-08
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 60 7e-08
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 7e-08
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 59 1e-07
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 59 1e-07
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 59 1e-07
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 59 1e-07
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 59 1e-07
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 59 1e-07
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 59 1e-07
UniRef50_Q2H6N4 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 59 1e-07
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 59 1e-07
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 59 1e-07
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 59 1e-07
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 59 1e-07
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 59 1e-07
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 59 1e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 59 1e-07
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 59 1e-07
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 59 1e-07
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 59 1e-07
UniRef50_UPI00006CA6E2 Cluster: Type III restriction enzyme, res... 58 2e-07
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 58 2e-07
UniRef50_Q1WTK7 Cluster: DNA/RNA helicase, DEAD/DEAH box family;... 58 2e-07
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 58 2e-07
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 58 2e-07
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 58 2e-07
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 58 2e-07
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 58 2e-07
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 58 2e-07
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q829Y6 Cluster: UvrABC system protein B; n=53; cellular... 58 2e-07
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 58 2e-07
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 2e-07
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 58 2e-07
UniRef50_UPI00006CFB5A Cluster: Helicase conserved C-terminal do... 58 2e-07
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 58 2e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 58 2e-07
UniRef50_Q0SI32 Cluster: UvrABC system protein B; n=8; Actinobac... 58 2e-07
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 58 2e-07
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 58 2e-07
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 58 2e-07
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 58 2e-07
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 58 2e-07
UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2; ... 58 2e-07
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 58 2e-07
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 58 2e-07
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 3e-07
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 58 3e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 58 3e-07
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 58 3e-07
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 58 3e-07
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 58 3e-07
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 57 4e-07
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 57 4e-07
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 57 4e-07
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 57 4e-07
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 57 4e-07
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 57 4e-07
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 57 4e-07
UniRef50_Q09775 Cluster: ATP-dependent RNA helicase rok1; n=1; S... 57 4e-07
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 57 4e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 5e-07
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 57 5e-07
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 57 5e-07
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 57 5e-07
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 57 5e-07
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 57 5e-07
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 57 5e-07
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 57 5e-07
UniRef50_A7D0F3 Cluster: Excinuclease ABC, B subunit; n=1; Halor... 57 5e-07
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 57 5e-07
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 57 5e-07
UniRef50_UPI00006CC3DB Cluster: DEAD/DEAH box helicase family pr... 56 7e-07
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 56 7e-07
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 56 7e-07
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 56 7e-07
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 7e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 7e-07
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 56 7e-07
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 56 7e-07
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 56 7e-07
UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2; ... 56 7e-07
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 56 7e-07
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 56 7e-07
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 56 7e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 56 7e-07
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 56 7e-07
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 56 7e-07
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 56 9e-07
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 56 9e-07
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 56 9e-07
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 56 9e-07
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 56 9e-07
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 1e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 56 1e-06
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 56 1e-06
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 56 1e-06
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 56 1e-06
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 56 1e-06
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 56 1e-06
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 56 1e-06
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 56 1e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 55 2e-06
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 55 2e-06
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 55 2e-06
UniRef50_Q4Q5M6 Cluster: ATP-dependent RNA helicase-like protein... 55 2e-06
UniRef50_Q21736 Cluster: Putative uncharacterized protein; n=2; ... 55 2e-06
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 55 2e-06
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 55 2e-06
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_A3CUY2 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 2e-06
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 55 2e-06
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 55 2e-06
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 55 2e-06
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 55 2e-06
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 55 2e-06
UniRef50_Q00TZ0 Cluster: Identical to gb|AJ010471 mRNA for DEAD ... 55 2e-06
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 55 2e-06
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 55 2e-06
UniRef50_Q62CK6 Cluster: UvrABC system protein B; n=213; cellula... 55 2e-06
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 55 2e-06
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 55 2e-06
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 55 2e-06
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 55 2e-06
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 55 2e-06
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 54 3e-06
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 54 3e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 54 3e-06
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 54 3e-06
UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 54 3e-06
UniRef50_A0CA40 Cluster: Chromosome undetermined scaffold_160, w... 54 3e-06
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 3e-06
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 143 bits (347), Expect = 4e-33
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+IVE TMP G R T+MFSATFPK+IQ+LA+DFL Y+FLAVGRVGSTSE
Sbjct: 354 DMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSE 413
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
NITQKVVWV+E DKRSFLLDLLNA
Sbjct: 414 NITQKVVWVEESDKRSFLLDLLNA 437
Score = 118 bits (284), Expect = 2e-25
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+D L LVFVETKKGAD LE++LY +GY TSIHGDR+QR+RE+AL +FR+G++PILVATA
Sbjct: 440 KDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA 499
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDI +V+HVI
Sbjct: 500 VAARGLDISNVKHVI 514
Score = 103 bits (246), Expect = 6e-21
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLPSD+EEYVHRIGRTGR+GNLG+ATSFFN+ N + +DL++LLVEAKQ+VP+WL +
Sbjct: 515 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENM 574
Query: 688 A 690
A
Sbjct: 575 A 575
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 138 bits (334), Expect = 1e-31
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+IVE MP TG+RQTLMFSATFPKQIQ LA DFL NY+FLAVGRVGSTSE
Sbjct: 466 DMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSE 525
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
NITQ ++WV E DKRS+LLDLL++
Sbjct: 526 NITQTILWVYEPDKRSYLLDLLSS 549
Score = 123 bits (296), Expect = 5e-27
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+D L L+FVETKKGAD LEE+LY +PVTSIHGDR Q+ERE+ALR FR+G PILVATA
Sbjct: 558 KDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATA 617
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDIPHV+HVI
Sbjct: 618 VAARGLDIPHVKHVI 632
Score = 103 bits (247), Expect = 5e-21
Identities = 44/63 (69%), Positives = 55/63 (87%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN+ NR + DL+ELL+E KQ++P+++
Sbjct: 633 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFMEDM 692
Query: 688 AAD 696
++D
Sbjct: 693 SSD 695
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 135 bits (326), Expect = 1e-30
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR I+E MP TG+RQTLMFSATFPK IQ LA DFL NY+FLAVGRVGSTSE
Sbjct: 438 DMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSE 497
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
NITQ ++WV+E +KRS+LLDLL+
Sbjct: 498 NITQTILWVNENEKRSYLLDLLS 520
Score = 124 bits (300), Expect = 2e-27
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
D L L+FVETKKGAD LEE+LY +PVTSIHGDR+QREREDAL+ FR+G PILVATAV
Sbjct: 532 DSLTLIFVETKKGADALEEFLYQNKHPVTSIHGDRSQREREDALKCFRSGDCPILVATAV 591
Query: 467 AARGLDIPHVRHVI 508
AARGLDIPHV+HVI
Sbjct: 592 AARGLDIPHVKHVI 605
Score = 101 bits (241), Expect = 2e-20
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLPSDVEEYVHRIGRTGRMGNLG+ATSFFN+ NR + DLVELL+E Q++P++L
Sbjct: 606 NYDLPSDVEEYVHRIGRTGRMGNLGIATSFFNEKNRNIVSDLVELLIETNQELPSFLEEM 665
Query: 688 AAD 696
A D
Sbjct: 666 AND 668
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 131 bits (317), Expect = 2e-29
Identities = 66/89 (74%), Positives = 71/89 (79%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+IVE MP TGERQTLMFSATFPK IQ LA DFLY Y+FLAVGRVGSTS
Sbjct: 471 DMGFEPQIRRIVEESRMPVTGERQTLMFSATFPKAIQELASDFLYRYIFLAVGRVGSTSV 530
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYN 269
NITQ + WV+E KRS LLDLL+ T N
Sbjct: 531 NITQTIFWVEENIKRSHLLDLLSNITKQN 559
Score = 114 bits (275), Expect = 2e-24
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+E+ L L+FVETKK AD LEE+LY+ +PVTSIHGDR Q ERE+ALR FR G+ PILVAT
Sbjct: 563 DENCLTLIFVETKKAADSLEEFLYNHNFPVTSIHGDRTQAEREEALRLFRCGRCPILVAT 622
Query: 461 AVAARGLDIPHVRHVI 508
AVAARGLDIP+V+ VI
Sbjct: 623 AVAARGLDIPNVKQVI 638
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
NFDLP++VEEYVHRIGRTGRMGNLG ATSFFN+ NR +A LV LL E Q++P +L
Sbjct: 639 NFDLPAEVEEYVHRIGRTGRMGNLGTATSFFNEKNRNVANGLVRLLAETGQEIPGFL 695
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 131 bits (317), Expect = 2e-29
Identities = 64/85 (75%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFEPQIR++VE + MP ER T MFSATFPK+IQLLAQDFL NYVFLAVGRVGSTS
Sbjct: 332 DMGFEPQIRQVVEFNRMPPKEERVTAMFSATFPKEIQLLAQDFLKQNYVFLAVGRVGSTS 391
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNA 254
ENI QK+VWV+E +KRS+L+DLL+A
Sbjct: 392 ENIMQKIVWVEEDEKRSYLMDLLDA 416
Score = 102 bits (245), Expect = 8e-21
Identities = 42/63 (66%), Positives = 56/63 (88%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLPSDV+EYVHRIGRTGR+GN+G+ATSFFND NR +AR+L++L+VEA Q++P+WL
Sbjct: 494 NYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGM 553
Query: 688 AAD 696
+ D
Sbjct: 554 SGD 556
Score = 97.1 bits (231), Expect = 4e-19
Identities = 49/75 (65%), Positives = 54/75 (72%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+ L LVFVETK+GA L YL Q Y V +IHGD Q ERE L FRTG PILVATA
Sbjct: 419 DSSLTLVFVETKRGASDLAYYLNRQNYQVVTIHGDLKQFEREKHLDLFRTGTAPILVATA 478
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDIP+V+HVI
Sbjct: 479 VAARGLDIPNVKHVI 493
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 126 bits (304), Expect = 6e-28
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR IVE MP RQTLMFSATFP IQ LA+DFL NY+FL+VGRVGSTSE
Sbjct: 325 DMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSE 384
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
NITQ++++VD+MDK+S LLDLL+A+
Sbjct: 385 NITQRILYVDDMDKKSALLDLLSAE 409
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFIG-FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q L++ K + LL E L L+FVETK+ ADQL ++L Q + T+IHGDR Q
Sbjct: 388 QRILYVDDMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQ 447
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
ERE AL F+ ILVATAVAARGLDIP+V HVI
Sbjct: 448 AERERALSAFKANVADILVATAVAARGLDIPNVTHVI 484
Score = 86.6 bits (205), Expect = 6e-16
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLT 681
N+DLPSD+++YVHRIGRTGR GN GVATSFFN N+ + + L+E+L EA Q+VP +L+
Sbjct: 485 NYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLS 542
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 126 bits (303), Expect = 8e-28
Identities = 58/82 (70%), Positives = 71/82 (86%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKIVE MP G+RQTLMFSATFP++IQ+LA DFL +Y+FL VG+VGSTS+
Sbjct: 379 DMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQ 438
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
NITQ++V+VDE +KR LLD+L
Sbjct: 439 NITQRIVYVDENEKRDHLLDIL 460
Score = 104 bits (250), Expect = 2e-21
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+ D LILVFVETK+GAD LE +L+++G V SIHGDR+Q +RE AL+ FR G TPILVAT
Sbjct: 464 DSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQSFREGSTPILVAT 523
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLDIP+V+ VI
Sbjct: 524 RVAARGLDIPNVKFVI 539
Score = 89.8 bits (213), Expect = 6e-17
Identities = 37/57 (64%), Positives = 49/57 (85%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP+D+EEYVHRIGRTGR+GNLG A SF+ D N +A++LV++L+EA Q VP+WL
Sbjct: 540 NYDLPTDIEEYVHRIGRTGRVGNLGEAISFYTDKNNNVAKELVDILLEANQIVPDWL 596
>UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 625
Score = 120 bits (288), Expect = 5e-26
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +2
Query: 266 QRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTP 445
Q E+D L L+FVETKK AD LEE+LY +PVTSIHGDR Q+EREDAL+ FR+G+ P
Sbjct: 420 QNEGDEKDCLTLIFVETKKSADSLEEFLYHYNHPVTSIHGDRTQKEREDALKCFRSGRCP 479
Query: 446 ILVATAVAARGLDIPHVRHVI 508
+LVATAVAARGLDIP+V+HVI
Sbjct: 480 VLVATAVAARGLDIPNVKHVI 500
Score = 96.3 bits (229), Expect = 7e-19
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLP+++EEYVHRIGRTGRMGNLG+ATSFFND NR +A LV LL E +Q++P++L
Sbjct: 501 NFDLPAEIEEYVHRIGRTGRMGNLGIATSFFNDKNRNVANGLVRLLQETQQEIPSFLEDM 560
Query: 688 AAD 696
+D
Sbjct: 561 TSD 563
Score = 73.3 bits (172), Expect = 6e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 126 DFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLLN 251
DFL+NY+FLAVGRVGSTS NITQ + WVDE DKRS LLDLL+
Sbjct: 374 DFLHNYIFLAVGRVGSTSVNITQSIFWVDENDKRSHLLDLLS 415
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 118 bits (283), Expect = 2e-25
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKIV+ MP G RQT++FSATFP++IQ LA DFL NY+FLAVGRVGS+++
Sbjct: 312 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTD 371
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q+V +V + DKRS L+DLL+AQ
Sbjct: 372 LIVQRVEFVHDSDKRSHLMDLLHAQ 396
Score = 113 bits (271), Expect = 6e-24
Identities = 53/72 (73%), Positives = 61/72 (84%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L LVFVETKKGAD LE +L G+P T+IHGDR+Q+ERE ALR F+TG+TPILVAT VAA
Sbjct: 407 LTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAA 466
Query: 473 RGLDIPHVRHVI 508
RGLDIPHV HV+
Sbjct: 467 RGLDIPHVAHVV 478
Score = 93.1 bits (221), Expect = 6e-18
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLP+D+++YVHRIGRTGR GN G+AT+FFND N +A+ L EL+ EA Q+VP+WLT
Sbjct: 479 NFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRY 538
Query: 688 AA 693
A+
Sbjct: 539 AS 540
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 115 bits (276), Expect = 1e-24
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
DMGFEPQIRKIV PKT R T MFSATFPK+IQ+LA+DFL NY+FLAVGRVGSTS
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTA-RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTS 369
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
ENI Q+++WV+EM+KRS L+++L
Sbjct: 370 ENIEQRLLWVNEMEKRSNLMEIL 392
Score = 101 bits (241), Expect = 2e-20
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLP D +EYVHRIGRTGR GNLG+ATSFFND NRG+ RDL L+VE+ Q+VP WL
Sbjct: 472 NYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQV 531
Query: 688 AAD 696
AA+
Sbjct: 532 AAE 534
Score = 96.3 bits (229), Expect = 7e-19
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQ-LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
K +NL++ E + L+LVFVETK+GA++L +L Q SIHGD Q ERE L
Sbjct: 384 KRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLEL 443
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR+GQ PILVATAVAARGLDIP+VRHVI
Sbjct: 444 FRSGQCPILVATAVAARGLDIPNVRHVI 471
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 114 bits (275), Expect = 2e-24
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
LIL+FVETKKGAD L +L S+GYPV+SIHGDR+Q ERE AL FR GQ PILVATAVAA
Sbjct: 438 LILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFRNGQCPILVATAVAA 497
Query: 473 RGLDIPHVRHVI 508
RGLDIP+V+HVI
Sbjct: 498 RGLDIPNVKHVI 509
Score = 113 bits (272), Expect = 4e-24
Identities = 50/83 (60%), Positives = 68/83 (81%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKI+E MP RQTLMFSATFPK+IQ LA DFLYNY+F+ VGRVGSTS+
Sbjct: 349 DMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSD 408
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
+I Q+++++ +++K ++L ++ N
Sbjct: 409 SIKQEIIYMTDVEKLNYLKNIFN 431
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLPSD+EEYVHRIGRTGR+GN G ATSF+ D N +A DLV+LL EA Q VP WL++
Sbjct: 510 NYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVDKNNNIAIDLVDLLKEANQIVPQWLSAL 569
Query: 688 A 690
A
Sbjct: 570 A 570
>UniRef50_UPI00005644BE Cluster: UPI00005644BE related cluster; n=1;
Mus musculus|Rep: UPI00005644BE UniRef100 entry - Mus
musculus
Length = 387
Score = 112 bits (270), Expect = 8e-24
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+ K ++ TM G T+MFSATF K+IQ+LA DFL Y+FLAV VGSTSE
Sbjct: 183 DMGFEPQLNKTLD--TMHPKGVCHTMMFSATFSKEIQMLACDFLDEYIFLAVAIVGSTSE 240
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
NI QKVVWV+E+DKR FLLDLLNA
Sbjct: 241 NIIQKVVWVEEIDKRLFLLDLLNA 264
Score = 75.8 bits (178), Expect = 1e-12
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT- 460
+D L LVFVETKK AD LE++LY +GY T+IHGD + AL +F +G +PILVAT
Sbjct: 267 KDSLTLVFVETKK-ADLLEDFLYHEGYANTNIHGD-----CQKALHQFLSGNSPILVATA 320
Query: 461 -AVAARGLDIPHVRHVI 508
AVAA+G DI +V+HVI
Sbjct: 321 VAVAAKGPDISNVKHVI 337
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAK 657
NFDLPSD+ EYV IG GR+GN G+ATSFFN+ N L +DL++LLVEAK
Sbjct: 338 NFDLPSDIVEYVPHIGYRGRVGNHGLATSFFNERNINLTKDLLDLLVEAK 387
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 111 bits (267), Expect = 2e-23
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+I E + MP G+RQTLMFSATFPKQIQ LA DFL +YVF+ VGR GST E
Sbjct: 300 DMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVE 359
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+I Q ++WV+E K+ +LD+L
Sbjct: 360 SIQQIILWVEEEIKQEAILDVL 381
Score = 89.4 bits (212), Expect = 8e-17
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
Q ++FVETK+GAD LE YLY GY V SIHGDR+Q +R+ +L+RF+ +LVAT VA
Sbjct: 389 QKTVIFVETKRGADILENYLYDHGYKVDSIHGDRSQADRDFSLKRFKENVIQLLVATDVA 448
Query: 470 ARGLDIPHVRHVI 508
+RGLDIP + VI
Sbjct: 449 SRGLDIPDIEVVI 461
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P+++E YVHR+GRTGR G G A +F N+ + L LV LL EAKQ +P+WL
Sbjct: 462 NYDMPNEIESYVHRVGRTGRAGKKGTAITFINEKTQNLIPPLVSLLEEAKQTIPDWLEEK 521
Query: 688 AAD 696
A +
Sbjct: 522 AQE 524
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 104 bits (250), Expect = 2e-21
Identities = 51/84 (60%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVEC--HTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGST 176
DMGFEPQIR IV+ MP+ G+RQTL++SATFP +IQ LA++F+ + FL VGRVGST
Sbjct: 324 DMGFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGST 383
Query: 177 SENITQKVVWVDEMDKRSFLLDLL 248
+ENITQ V W+++ DKR LL LL
Sbjct: 384 TENITQDVRWIEDPDKRQALLTLL 407
Score = 90.2 bits (214), Expect = 5e-17
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
LL R E +L+LVFVE K+ AD LE +L + SIHGDR QRERE+ALR F++G
Sbjct: 403 LLTLLRENEGKLVLVFVEKKRDADYLERFLRNSELACVSIHGDRVQREREEALRLFKSGA 462
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
+LVAT VA+RGLDIP+V VI
Sbjct: 463 CQVLVATDVASRGLDIPNVGVVI 485
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQ 660
+D+PS++++YVHRIGRTGR G +GVA SFFN+ NR + DL+ LL E Q
Sbjct: 487 YDMPSNIDDYVHRIGRTGRAGKVGVAISFFNEKNRNIVDDLIPLLNETNQ 536
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 104 bits (249), Expect = 3e-21
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L +VFVE K+ ADQ+E++L Q +P SIHGDR+Q+ERE ALR FR+GQ PILVAT VAA
Sbjct: 461 LTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQEREHALRLFRSGQRPILVATDVAA 520
Query: 473 RGLDIPHVRHVIIL 514
RGLDIP++ HVI L
Sbjct: 521 RGLDIPNITHVINL 534
Score = 101 bits (241), Expect = 2e-20
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGE-RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTS 179
DMGF PQIR+IVE MP + + RQT+MFSATFP++IQ LA+DFL+NY+FL VGRVG+TS
Sbjct: 372 DMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATS 431
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNAQ 257
+I Q+VV+ +E K L+ LL Q
Sbjct: 432 GSIVQRVVYAEEDHKPRLLVKLLLEQ 457
Score = 77.8 bits (183), Expect = 3e-13
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N D+P ++++YVHRIGRTGR GN G+ATSF N++N+ + RDL+ L E+ QD P W
Sbjct: 533 NLDMPCNIDDYVHRIGRTGRAGNTGLATSFVNESNKPILRDLLAALEESGQDAPEW 588
>UniRef50_UPI0000E25CDC Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 494
Score = 103 bits (246), Expect = 6e-21
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLPSD+EEYVHRIGRTGR+GNLG+ATSFFN+ N + +DL++LLVEAKQ+VP+WL +
Sbjct: 313 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENM 372
Query: 688 A 690
A
Sbjct: 373 A 373
Score = 79.8 bits (188), Expect = 6e-14
Identities = 36/49 (73%), Positives = 45/49 (91%)
Frame = +2
Query: 362 YPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
Y TSIHGDR+QR+RE+AL +FR+G++PILVATAVAARGLDI +V+HVI
Sbjct: 264 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 312
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 101 bits (242), Expect = 2e-20
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF+ETK+ AD L YL + YP TSIHGDR QRERE+AL F+TG+ PIL+AT+VAARG
Sbjct: 527 LVFLETKRSADFLAAYLSQEQYPATSIHGDRLQREREEALLDFKTGRAPILIATSVAARG 586
Query: 479 LDIPHVRHVI 508
LDIP V+HVI
Sbjct: 587 LDIPGVKHVI 596
Score = 99 bits (238), Expect = 6e-20
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEP+IRK+V MP+ G+RQTLMFSATF +IQ LA++FL YVF+ VGRVG +
Sbjct: 437 DMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVGGANS 496
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
+ITQ+V V + +KR L+++LN
Sbjct: 497 DITQEVHQVTKYEKREKLVEILN 519
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTN--RGLARDLVELLVEAKQDVPNWL 678
N+DLPS ++EYVHRIGRTGR GNLG ATSFF+ D N + LAR LV+ L +A+Q VP WL
Sbjct: 597 NYDLPSGIDEYVHRIGRTGRCGNLGKATSFFDPDVNQDKELARSLVKTLGDAQQVVPPWL 656
Query: 679 TSTA 690
A
Sbjct: 657 EEIA 660
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 100 bits (239), Expect = 4e-20
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +2
Query: 278 PEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVA 457
P++ L LVFVETK+G D LE++L G T+IHGD+ Q ERE A++ F++G TPI+VA
Sbjct: 529 PKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERAMKSFKSGATPIMVA 588
Query: 458 TAVAARGLDIPHVRHVI 508
T VAARGLDIPHV HVI
Sbjct: 589 TDVAARGLDIPHVAHVI 605
Score = 86.2 bits (204), Expect = 7e-16
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLP +++YVHRIGRTGR G G+AT+FFND N LA+ LVEL+ E+ Q+VP+WL
Sbjct: 606 NFDLPKAIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQY 665
Query: 688 A 690
A
Sbjct: 666 A 666
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLL 119
DMGFEPQIRKIVE MP G RQT++FSATFP +IQ+L
Sbjct: 284 DMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL 322
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = +3
Query: 33 IVECHTMPKTGERQTLMFSAT--FPKQIQL--LAQDFLYNYVFLAVGRVGSTSENITQKV 200
++ C + E +F A FP++++ L + F NY+FL+VGRVGS+++ I Q+V
Sbjct: 445 LLHCTVVRALWEIVLALFGANWVFPEKVKEIGLLRIFYANYIFLSVGRVGSSTDLIVQRV 504
Query: 201 VWVDEMDKRSFLLDLLNAQ 257
+V++ DKR L+DLL +Q
Sbjct: 505 EFVEDTDKRYHLMDLLQSQ 523
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 96.7 bits (230), Expect = 5e-19
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFV +K AD +++YLY+ G P TSIH DR QREREDALR FR+ + PILVAT V+ARG
Sbjct: 393 LVFVNSKVQADLVDDYLYNMGLPSTSIHSDRTQREREDALRAFRSAKCPILVATGVSARG 452
Query: 479 LDIPHVRHVI 508
LDI +V HVI
Sbjct: 453 LDIKNVMHVI 462
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 4/61 (6%)
Frame = +1
Query: 508 NFDLPS----DVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N+ LPS + EY+HRIGRT R+GN G+ATSF+N+ + +A DLV++L+E+KQ +P++
Sbjct: 463 NYQLPSASNGGITEYIHRIGRTARIGNEGLATSFYNERDTDIAADLVKILLESKQPIPDF 522
Query: 676 L 678
L
Sbjct: 523 L 523
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 FEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYN-YVFLAVGRVGSTSENI 188
+E +I+ + + + + +MFSATF K+ + LA+ FL + +V + +GR GST N+
Sbjct: 305 WESDFNRIMSGGDVNEDADHRYMMFSATFNKECRQLARKFLSDDHVRVRIGRPGSTHVNV 364
Query: 189 TQKVVWVDEMDKRSFLLDLL 248
Q++V+V++ K+ L DLL
Sbjct: 365 DQRIVFVEDHLKKQALYDLL 384
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 96.3 bits (229), Expect = 7e-19
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
++K LL + ++ +VFVETK+ AD + +L + P TSIHGDR QRERE AL
Sbjct: 515 YSKREQLLDFLKTIGNERTMVFVETKRQADFIATFLCQEELPTTSIHGDREQREREQALA 574
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
F+ G+ PILVAT+VAARGLDIP V+HV+
Sbjct: 575 DFKAGKCPILVATSVAARGLDIPEVQHVV 603
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFEP +R++V MP RQTL+FSAT+P+ IQ LA DFL +Y+FLAVG VG
Sbjct: 443 DMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFLKTDYLFLAVGIVGGAC 502
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
++ Q V V + KR LLD L
Sbjct: 503 SDVEQTFVQVTKYSKREQLLDFL 525
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
NFDLP +++EYVHRIGRTGR GN+G A SF++ + + LA LV +L +A+Q+VP+WL
Sbjct: 604 NFDLPKNIDEYVHRIGRTGRCGNIGRAVSFYDPEVDSQLAASLVTILSKAQQEVPSWLEE 663
Query: 685 TA 690
+A
Sbjct: 664 SA 665
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 96.3 bits (229), Expect = 7e-19
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFIG-FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q L +G F+K L++ R D+ +VFVETKK AD + +L + TSIHGDR Q
Sbjct: 517 QTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 576
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
RERE AL FR G+ P+LVAT+VAARGLDI +V+HVI
Sbjct: 577 REREQALGDFRFGKCPVLVATSVAARGLDIENVQHVI 613
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGF P+++K++ C MP +RQTLMFSATFP++IQ LA +FL NY+F+AVG+VG
Sbjct: 453 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 512
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
++ Q V+ V + KR L+++L
Sbjct: 513 RDVQQTVLQVGQFSKREKLVEIL 535
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
NFDLPS ++EYVHRIGRTGR GN G A SFF+ +++ LA+ LV++L +A+QDVP WL
Sbjct: 614 NFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEE 673
Query: 685 TA 690
A
Sbjct: 674 IA 675
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/70 (67%), Positives = 54/70 (77%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFVETK+GAD L L +G P TSIHGDR Q+ERE ALR F++ PIL+AT+VAARG
Sbjct: 571 LVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQEREQALRDFKSAVCPILIATSVAARG 630
Query: 479 LDIPHVRHVI 508
LDIP V HVI
Sbjct: 631 LDIPKVEHVI 640
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFE +IRK+ MP +R TLMFSATFP +IQ LA DFL +++FL VGRVG
Sbjct: 478 DMGFETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGAC 537
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
++TQ ++ VD+ DKR+ LL+L++
Sbjct: 538 TDVTQSIIQVDQDDKRAKLLELIS 561
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRG-LARDLVELLVEAKQDVPNWLTS 684
N+D+P +++EYVHRIGRTGR GNLG AT+F+++ G LAR LV++L EA+Q+VP WL
Sbjct: 641 NYDMPKEIDEYVHRIGRTGRCGNLGRATTFYDNNKDGELARSLVKILSEAQQEVPGWLEE 700
Query: 685 TA 690
A
Sbjct: 701 CA 702
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQL--ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
TK LL E++ L ILVFV KK AD + L +P TSIHGDR QRERE+AL
Sbjct: 544 TKLKELLNE-EIEQNMLNGILVFVSEKKTADFIAALLSEDNFPTTSIHGDRLQREREEAL 602
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
F+TG+ ILVATAVAARGLDI +VRHVI
Sbjct: 603 YDFKTGKMAILVATAVAARGLDIKNVRHVI 632
Score = 91.5 bits (217), Expect = 2e-17
Identities = 47/90 (52%), Positives = 59/90 (65%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P + K++ TM GERQTLMFSATFP++IQ LA FL NYVF+ VG VGS
Sbjct: 469 DMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQLAAKFLNNYVFVTVGIVGSACT 528
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNV 272
+I Q V + DKR+ L +LLN + N+
Sbjct: 529 DIEQSFFEVKKSDKRTKLKELLNEEIEQNM 558
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT-NRGLARDLVELLVEAKQDVPNWLTS 684
N+DLP +++EY+HRIGRTGR+GN G ATSFF+ + L DLV +L +A Q+VP+WL S
Sbjct: 633 NYDLPKEIDEYIHRIGRTGRVGNKGKATSFFDPRYDEKLQGDLVRVLTQAGQEVPDWLAS 692
Query: 685 TAAD 696
A +
Sbjct: 693 GAGE 696
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF PQI I+E MP G R TLMFSATFP QIQ LA FL +Y+FL VGRVG T
Sbjct: 617 DMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCT 676
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++TQ V+ V KR L +LL
Sbjct: 677 DVTQSVIQVSGTKKRETLENLL 698
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+DLP D EYVHRIGRTGR+GN G ATSFF+ D + LAR LV+LL +A+QDVP+WL +
Sbjct: 777 NYDLPKDANEYVHRIGRTGRIGNKGKATSFFDLDRDGSLARSLVKLLSDAEQDVPDWLEN 836
Query: 685 TA 690
A
Sbjct: 837 CA 838
Score = 83.0 bits (196), Expect = 7e-15
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +2
Query: 257 NLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTG 436
NLLQ + ++ LVFVE K+ AD L +L + +P T + DR + +RE ALR FR G
Sbjct: 696 NLLQTSGTDQT---LVFVEKKRDADFLANFLSQKNFPPTILFADRTREKRESALRDFRNG 752
Query: 437 QTPILVATAVAARGLDIPHVRHVI 508
PILVATAVAARGLDI V+HVI
Sbjct: 753 IAPILVATAVAARGLDINDVKHVI 776
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/85 (49%), Positives = 60/85 (70%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P+I+ I+ MP +R TLMFSATFP +IQ LA +FL NYV+L +G+VG T
Sbjct: 519 DMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVGGTHS 578
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+ITQ ++ V+E KR L+++L+ +
Sbjct: 579 DITQCIMEVEESAKRDKLIEILDTE 603
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFV+TK+ AD L YL G+ TSIHGDR Q++RE+AL F+ G +L+ATAVAARG
Sbjct: 609 LVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEALAEFKAGTQHVLIATAVAARG 668
Query: 479 LDIPHVRHVI 508
LDI V+ VI
Sbjct: 669 LDIADVKQVI 678
Score = 80.6 bits (190), Expect = 4e-14
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NDTNRGLARDLVELLVEAKQDVPNWLTS 684
N+DLP ++EEY+HRIGRTGR+GN G A SFF + GLAR LV+ L +A+Q+VP+WL
Sbjct: 679 NYDLPDEIEEYIHRIGRTGRIGNKGKAISFFTRGKDEGLARALVKTLADAEQEVPSWLEE 738
Query: 685 TA 690
A
Sbjct: 739 AA 740
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L+L+FVETKK AD +E YL S+ + +IHGDR+Q +RE AL F+ G PI+VAT VAA
Sbjct: 574 LVLIFVETKKRADLIEGYLLSENFKAVNIHGDRSQEDREKALSLFKAGVRPIMVATDVAA 633
Query: 473 RGLDIPHVRHVI 508
RGLDI ++ HVI
Sbjct: 634 RGLDISNITHVI 645
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +3
Query: 69 RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
RQT+MFSATFPK+IQ LA++FL +Y++LAVGRVGST+E I Q++++ D+ K +L+ LL
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAVGRVGSTNEFIKQRLLYADQDQKIKYLIKLL 565
Query: 249 NAQT 260
T
Sbjct: 566 KDNT 569
Score = 78.6 bits (185), Expect = 1e-13
Identities = 31/56 (55%), Positives = 46/56 (82%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N DLP+++++YVHRIGRTGR GN+G+ATS N++NR + +DL+ LL E+ Q++P W
Sbjct: 646 NCDLPTNIDDYVHRIGRTGRAGNIGIATSLVNESNRPILKDLLLLLQESNQEIPIW 701
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+ K + L++ + D I VFVETK+GAD L +L + +P TSIHGDR Q +RE ALR
Sbjct: 475 YAKRSKLIEILSEQADGTI-VFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALR 533
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
F+ G +L+AT+VA+RGLDI +++HVI
Sbjct: 534 DFKNGSMKVLIATSVASRGLDIKNIKHVI 562
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF +R+I+ TM E QTLMFSATFP++IQ +A +FL NYVF+A+G VG
Sbjct: 406 DMGFSEDMRRIMTHVTMRP--EHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACS 463
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
++ Q + V++ KRS L+++L+ Q
Sbjct: 464 DVKQTIYEVNKYAKRSKLIEILSEQ 488
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+PS +++YVHRIGRTGR+GN G ATSFF+ + +R +A DLV++L + Q VP++L +
Sbjct: 563 NYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRT 622
Query: 685 TAA 693
A
Sbjct: 623 CGA 625
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 90.2 bits (214), Expect = 5e-17
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFVE KK AD + +L YP TSIHGDR QR+RE+AL F++G+ ILVATAVAARG
Sbjct: 455 LVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARG 514
Query: 479 LDIPHVRHVI 508
LDI +V HVI
Sbjct: 515 LDIKNVSHVI 524
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I K+V+ TM GERQTLMFSATFP ++Q LA+ FL NY+FLAVG VG
Sbjct: 361 DMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACS 420
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
++ Q V K+ L ++L +
Sbjct: 421 DVEQNFYEVARNKKKDLLKEILERE 445
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP ++EYVHRIGRTGR+GN G ATSFF+ + + L DLV +L +A Q VP+W+
Sbjct: 525 NYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEEDAPLRGDLVRILKQANQSVPDWM 582
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 89.0 bits (211), Expect = 1e-16
Identities = 37/70 (52%), Positives = 56/70 (80%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++FV +K+ A++++++L++ G P TS+HGDRNQ ERE A+R FR G+ PIL+AT V ARG
Sbjct: 365 IIFVNSKRAAEEVDDFLFNLGMPCTSMHGDRNQLEREAAMRGFRGGKWPILIATGVTARG 424
Query: 479 LDIPHVRHVI 508
+D+ +V HVI
Sbjct: 425 IDVRNVMHVI 434
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = +1
Query: 508 NFDLPS----DVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N+DLPS +EEY HRIGRTGR+G+ G+ATSF++D + +A L L+E Q++P++
Sbjct: 435 NYDLPSMEYGGIEEYTHRIGRTGRIGHRGLATSFYSDRDEPIASVLTRTLMETHQEIPDF 494
Query: 676 L 678
L
Sbjct: 495 L 495
Score = 37.5 bits (83), Expect = 0.34
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 117 LAQDFLYN-YVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLLNA 254
LAQ L +V L VGR GS+ NI Q V++VD K+ L+DL+ +
Sbjct: 312 LAQTHLAETHVRLRVGRAGSSHANIKQNVIYVDPSLKKQALIDLIKS 358
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQ-GYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
Q ++FV K AD+L++YLY++ P TS+H DR QREREDALR FR G PILV T V
Sbjct: 387 QRTIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRAFRAGTAPILVTTGV 446
Query: 467 AARGLDIPHVRHVI 508
ARG+D+ +V HV+
Sbjct: 447 TARGIDVRNVAHVV 460
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Frame = +1
Query: 508 NFDLPS----DVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N+DLPS +EEY HRIGRTGR+GN G+ATSF+ D + +A LV ++E Q++P +
Sbjct: 461 NYDLPSMDHGGIEEYTHRIGRTGRIGNKGLATSFYTDRDEAIASVLVRTMLETNQEIPEF 520
Query: 676 LTSTAAD 696
L+ D
Sbjct: 521 LSGYIPD 527
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 ERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLD 242
E + L+FSATFPK+I+ LA++ L ++V L VGR GST NI Q V+ M+K+ L D
Sbjct: 320 EIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALND 379
Query: 243 LLNA 254
L+N+
Sbjct: 380 LINS 383
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+ K NLL+ + IL+F++TKKG DQ+ L G+P SIHGD++Q ER+ L
Sbjct: 299 YNKLVNLLEDIM--DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLS 356
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
F++G++PI+ AT VAARGLD+ V++VI
Sbjct: 357 EFKSGKSPIMTATDVAARGLDVKDVKYVI 385
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D P +E+YVHRIGRTGR G G A +FF N A+DL+ +L EA Q V
Sbjct: 386 NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKV 438
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQI+KIV P +RQTL +SAT+PK+++ LA++FL++ + +G +
Sbjct: 228 DMGFEPQIKKIVS-QIRP---DRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKAN 283
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
I+Q V + E K + L++LL
Sbjct: 284 HAISQHVEILSESQKYNKLVNLL 306
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 86.6 bits (205), Expect = 6e-16
Identities = 42/94 (44%), Positives = 59/94 (62%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K + LL+ E++ ++F+ETKK D + + G+P IHGD++QRERE L F
Sbjct: 321 KLSILLREIMAEKECKTIIFIETKKRVDDITRKVLRDGWPAMCIHGDKSQREREYTLNSF 380
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVIILIYHLT 529
R+G+ PIL+AT VAARGLD+ V+ VI Y T
Sbjct: 381 RSGKNPILIATDVAARGLDVDDVKFVINFDYPTT 414
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV-PNWLTS 684
NFD P+ E+Y+HRIGRTGR N G A +FF N G AR+L+++L EAKQ + P L
Sbjct: 408 NFDYPTTSEDYIHRIGRTGRSNNTGTAYTFFTPDNAGRARELIDVLKEAKQVINPKLLDM 467
Query: 685 T 687
T
Sbjct: 468 T 468
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIR I+E P + QTLM+SAT+P + L +D+L +Y+ + VG + + +
Sbjct: 248 DMGFEPQIRAIIE-QIRP---DHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAAN 303
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
NI Q + E +K + L LL
Sbjct: 304 HNILQIIDVCQEHEKEAKLSILL 326
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E ++L+FVETKK A+ + L+ +G T+IHGDR Q++RE AL F+ TPILVAT
Sbjct: 719 EMSDMVLIFVETKKMAEDVNRRLHREGISSTTIHGDRRQQDREAALEDFKQKVTPILVAT 778
Query: 461 AVAARGLDIPHVRHVI 508
VA+RGLDIP V HV+
Sbjct: 779 DVASRGLDIPDVAHVV 794
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECH--TMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGS 173
+MGFE QI ++V MP ERQT MFSATFP++I LA+ +L Y L VGRVGS
Sbjct: 631 EMGFEEQIEELVASRYTDMPTVDERQTFMFSATFPQRILNLAKRYLRRKYYLLTVGRVGS 690
Query: 174 TSENITQKVVWVDEMDKRSFLLDLL 248
T++NITQ + V + +K LL ++
Sbjct: 691 TTKNITQTIEHVPDNEKMDRLLQII 715
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTSTA 690
FDLP ++++Y HRIGRTGR GN G+AT+F+N NR LA DL + E Q++P W A
Sbjct: 796 FDLPQEMDDYTHRIGRTGRAGNKGIATAFYNRNNRRLALDLHKYFSEHGQEIPKWFQQEA 855
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFVETK+ AD L + +P TSIHGDR QRERE AL F++G+ +L+AT+VAARG
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARG 486
Query: 479 LDIPHVRHVI 508
LDI +V HV+
Sbjct: 487 LDIKNVNHVV 496
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I K++ TMP+ +RQTLMFSATFP +IQ LA FL+NY+ + VG VG
Sbjct: 337 DMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACA 396
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
++ Q + V++ KR L ++LN
Sbjct: 397 DVEQTIHLVEKFKKRKKLEEILN 419
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/58 (55%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP +++YVHRIGRTGR+GN G ATSF++ + +R +A DLV++L +A Q VP++L
Sbjct: 497 NYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQSVPDFL 554
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/82 (42%), Positives = 59/82 (71%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
+++ ++ IL+FV TK+ AD++ +L G+P SIHGD+ Q ER+ L +F+TG++
Sbjct: 373 MEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKS 432
Query: 443 PILVATAVAARGLDIPHVRHVI 508
PI+VAT VA+RG+D+ ++ HV+
Sbjct: 433 PIMVATDVASRGIDVRNITHVL 454
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI+ P +RQTLM+SAT+PK+++ LA DFL +++ + +G + + +
Sbjct: 295 DMGFEPQIRKIIG-QIRP---DRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAAN 350
Query: 180 ENITQKVVWVDEMDKRSFLL 239
ITQ V V EM+KR ++
Sbjct: 351 HRITQIVEVVTEMEKRDRMI 370
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D P++ E+Y+HRIGRTGR G +G A + F N+ ARDLV +L EAKQ +
Sbjct: 455 NYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQI 507
>UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain,
putative; n=4; Plasmodium (Vinckeia)|Rep: Helicase
conserved C-terminal domain, putative - Plasmodium
yoelii yoelii
Length = 212
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 257 NLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTG 436
+LLQR E D++I VFVETK+ AD + + L +G P IHGD+ Q ER L F+TG
Sbjct: 23 SLLQRIFKENDRII-VFVETKRSADFITKALRLEGMPALCIHGDKKQDERRWVLNDFKTG 81
Query: 437 QTPILVATAVAARGLDIPHVRHVI 508
++PIL+AT VA+RGLDI +V+ VI
Sbjct: 82 KSPILIATDVASRGLDIKNVKFVI 105
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D P+ +E+YVHRIGRTGR G G + +F LA++LV++L E++Q +P
Sbjct: 106 NYDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLAKELVKILRESEQPIP 159
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/87 (49%), Positives = 57/87 (65%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
KC LL + L ++FVETK+ AD +E +L +Q IHGD++Q ERE AL+ F
Sbjct: 632 KCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLF 691
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
+ G ILVAT VAARGLDI +++HVI
Sbjct: 692 KRGIKNILVATDVAARGLDISNIKHVI 718
Score = 82.2 bits (194), Expect = 1e-14
Identities = 31/56 (55%), Positives = 44/56 (78%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
NFDLPS++++Y+HRIGRTGR GN+G+ATSF N+ N+ + +DL+ L E Q +P W
Sbjct: 719 NFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKNIFKDLLATLEECNQQIPRW 774
Score = 80.2 bits (189), Expect = 5e-14
Identities = 49/102 (48%), Positives = 65/102 (63%), Gaps = 20/102 (19%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMP------KTGE--------------RQTLMFSATFPKQIQLLA 122
DMGF PQIR IV + MP T E RQT+MFSATF K+IQ+LA
Sbjct: 539 DMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIKRQTIMFSATFRKEIQVLA 598
Query: 123 QDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
+++L Y FL VG+VGST+E I Q +V+V+E +K ++LL+LL
Sbjct: 599 KEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLL 640
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND-TNRGLARDLVELLVEAKQDVPNWLTS 684
N+DLP D++EYVHRIGRTGR+GN G++ SF++D T+ L +DLV++L EA Q +P+WLT
Sbjct: 590 NYDLPKDIDEYVHRIGRTGRLGNRGLSISFYDDETDACLTKDLVKVLSEANQTIPDWLTQ 649
Query: 685 TA 690
A
Sbjct: 650 KA 651
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+ ++ TM T ER TLMFSATFP +IQ LA FL NY+F+ VG VG+ +
Sbjct: 426 DMGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYLFVVVGTVGAANT 485
Query: 183 NITQKVVWVDEMDKRSFLLDL 245
++ Q+V+ V + +K++ L+++
Sbjct: 486 DVKQEVLCVPKFEKKAKLVEM 506
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+D+ ILVFVE K+ AD + YL + + T++HGDR Q +RE AL FRTG ILVATA
Sbjct: 515 DDEKILVFVEQKRVADFVGTYLCEKKFRATTMHGDRYQAQREQALSEFRTGVHNILVATA 574
Query: 464 VAARGLDIPHVRHVI 508
V ARGLDI + V+
Sbjct: 575 VTARGLDIKGIGVVV 589
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 83.4 bits (197), Expect = 5e-15
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K +LL+ + + I++FVETKK + L + + GY TSIHGD++Q ER+ L+ F
Sbjct: 465 KLLSLLKEISSDVNSKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDF 524
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVIILIY 520
R G++ ILVAT VAARGLD+ V++VI Y
Sbjct: 525 RHGKSTILVATDVAARGLDVEDVKYVINFDY 555
Score = 73.3 bits (172), Expect = 6e-12
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI+E P +RQ LM+SAT+PK++Q LA+DFL++Y+ + +G + S +
Sbjct: 392 DMGFEPQIRKIIE-QIRP---DRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSAN 447
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
NI Q V +E +K LL LL
Sbjct: 448 HNIHQIVDVCEEGEKEGKLLSLL 470
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQ 660
NFD P+ E+Y+HRIGRTGR + G A +FF N AR+L+ +L EA Q
Sbjct: 552 NFDYPNSSEDYIHRIGRTGRCSSYGTAYTFFTPGNGRQARELLSVLEEAGQ 602
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 83.0 bits (196), Expect = 7e-15
Identities = 44/87 (50%), Positives = 58/87 (66%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K L++ R + ++VFVE+KK AD + +L + + TSIHGDR Q +RE ALR F
Sbjct: 647 KRNKLVEILRDLGNSRVIVFVESKKTADFIAAFLANTQFQATSIHGDRLQSQREQALREF 706
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
++GQ ILVAT VAARGLDI V +VI
Sbjct: 707 KSGQRNILVATNVAARGLDIAGVEYVI 733
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I + TM G R TLMFSATFP +Q +A +L++YVF+ G +G +
Sbjct: 574 DMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKYLHDYVFVTTGNIGGMNP 633
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+ V DKR+ L+++L
Sbjct: 634 DVCQEFHEVQRQDKRNKLVEIL 655
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+DLP+D+EEYVHRIGRTGR+GN G + SF++ D + A LV+ LV ++ DVP++L S
Sbjct: 734 NYDLPADIEEYVHRIGRTGRVGNAGRSISFYDPDRDAPNAGRLVQRLVASEADVPSFLQS 793
Query: 685 TAA 693
+ +
Sbjct: 794 SVS 796
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 278 PEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVA 457
P E + IL+F TK GAD++ + L G P +IHG+++Q +R+ AL FR G+T ILVA
Sbjct: 247 PGEFERILIFTRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRRGKTMILVA 306
Query: 458 TAVAARGLDIPHVRHVI 508
T VAARG+DIP V HV+
Sbjct: 307 TDVAARGIDIPGVSHVL 323
Score = 50.0 bits (114), Expect = 6e-05
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF +R+I + +PK ERQTL FSAT PK I+ L + N V ++V +T+E
Sbjct: 163 DLGFVHALRRISQL--VPK--ERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAE 218
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q + V + +K+S LL+L+
Sbjct: 219 RIDQYLFMVQQDEKQS-LLELI 239
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N++LP+ E+YVHRIGRT R G GVA +F + R +D+
Sbjct: 324 NYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDI 365
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F KK A ++E+ L G+ V+ IHGD Q ER +L RF++ +TP+LVAT VAAR
Sbjct: 423 ILIFALYKKEAQRIEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAETPLLVATDVAAR 482
Query: 476 GLDIPHVRHVIILIYHLT 529
GLDIP+V HV+ + LT
Sbjct: 483 GLDIPNVEHVVNYTFPLT 500
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLT 681
N+ P +E+YVHRIGRTGR G G + +FF + ++ A +L+ +L +A Q VP+ LT
Sbjct: 494 NYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQKVPDALT 551
Score = 42.7 bits (96), Expect = 0.009
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
D GFEP IR I+ + G R T MFSAT+P ++ LA+ F+ V + VG S +
Sbjct: 329 DKGFEPDIRAIIGMCKSREEG-RHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSAN 387
Query: 180 ENITQKV-VWVDEMDKRSFLLDLLNAQTCYNVHVPKRINLYLCLWKLRKVRI 332
+ Q V V D K L D L + N K L L+K RI
Sbjct: 388 RRVEQTVEVLADGYAKERRLNDFLRS---VNAQRSKDKILIFALYKKEAQRI 436
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF +++K+V TMP ER TLMFSATFP ++Q LA +FL NY+F+ VG VG
Sbjct: 469 DMGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGACM 528
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+V+ +D + LL++L
Sbjct: 529 DVLQEVIEIDAKSRIDRLLEIL 550
Score = 77.8 bits (183), Expect = 3e-13
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
++ LL+ +E LVF +KK AD L L ++ P TSIHGDR Q +RE+ LR
Sbjct: 541 SRIDRLLEILTEKEGVKTLVFASSKKTADFLAALLSTKNLPATSIHGDRFQYQREEVLRD 600
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
F++G ILVATAVAARGLDI V VI
Sbjct: 601 FKSGHRNILVATAVAARGLDIKGVGLVI 628
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N++LP+D++EYVHRIGRTGR+GN G A SFFN D + +A LV +L A+Q VP +L S
Sbjct: 629 NYELPTDIDEYVHRIGRTGRLGNTGHAISFFNPDKDSAIAGKLVNVLAAAQQTVPVFLES 688
Query: 685 TAA 693
A+
Sbjct: 689 MAS 691
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
D+L LVF TK GAD+L L + G+ +IHG+R+Q +RE AL+ FR G +LVAT V
Sbjct: 314 DELALVFSRTKHGADRLARKLSNAGFETAAIHGNRSQGQRERALKAFREGTLKVLVATDV 373
Query: 467 AARGLDIPHVRHV 505
AARG+DIP VR V
Sbjct: 374 AARGIDIPDVRFV 386
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF +RKI +P ERQT++FSAT PKQ++ L++ +L + + V G ++
Sbjct: 232 DLGFIHALRKIAPL--LP--AERQTMLFSATMPKQMEELSRAYLTDPARVEVAPPGKIAD 287
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
ITQ V +V++ K L+DLL
Sbjct: 288 KITQSVHFVEQGAKTQLLIDLL 309
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFDLP+ E +VHRIGRT R G G A +F G R + +++
Sbjct: 388 NFDLPNVPENFVHRIGRTARAGRDGQAVAFCAPEEMGELRAVQKVM 433
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +2
Query: 278 PEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVA 457
P++++ +L+F KK A ++E L GY V +IHGD +Q++R AL F++G++ +L+A
Sbjct: 356 PKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLA 415
Query: 458 TAVAARGLDIPHVRHVIILIYHLT 529
T VAARGLDIP+V+ VI L + LT
Sbjct: 416 TDVAARGLDIPNVKTVINLTFPLT 439
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N P VE+YVHRIGRTGR G G A + F + + LA LV +L A Q VP
Sbjct: 433 NLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVP 486
Score = 53.2 bits (122), Expect = 6e-06
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+ GFE I+ I+ +RQTLMF+AT+PK+++ LA F+ N + +++G +
Sbjct: 269 EKGFEEDIKNIIR---ETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTA 325
Query: 183 N--ITQKVVWVDEMDKRSFLLDLL 248
N ITQ V VD K LL+LL
Sbjct: 326 NKRITQIVEVVDPRGKERKLLELL 349
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F ETK+GAD L + L G+P IHGD+ Q ER L FRTG +PI++AT VAAR
Sbjct: 240 VLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGASPIMIATDVAAR 299
Query: 476 GLDIPHVRHVI 508
GLDI + VI
Sbjct: 300 GLDIKDINFVI 310
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
NFD P+ +E+Y+HRIGRTGR G GV+ SFF +A DL+++L EAKQ +P
Sbjct: 311 NFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTPDKYRMASDLIKVLKEAKQRIP 364
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNY-VFLAVGRVGS-- 173
DMGFEPQIRK+V P +RQTL++SAT+PK++Q LA+D + + VG V +
Sbjct: 149 DMGFEPQIRKLVS-QIRP---DRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALK 204
Query: 174 TSENITQKVVWVDEMDKRSFL 236
S NI Q V V+E +K++ L
Sbjct: 205 ASHNIKQYVNVVEESEKKARL 225
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TKK D++ E L +GY +HGD +QRER ++ F+ G+T +LVAT VAARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 479 LDIPHVRHVI 508
LDIP V HVI
Sbjct: 303 LDIPDVSHVI 312
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFD+P + E Y+HRIGRTGR G G A + N R L + + E +
Sbjct: 313 NFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAI 358
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I+ +T+ T +QTL+FSAT P I+ + + FL Y + + T
Sbjct: 157 DMGFIDDIEAIL--NTL--TNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVP 212
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q + E +K L+ +LN++
Sbjct: 213 AIRQVYYELPETEKIEGLVSILNSE 237
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
E + +++F TK GAD++ L +G+ V IH DRNQRER +AL F++G+ +LVAT
Sbjct: 370 EFKSVIIFTRTKMGADRIAHRLQREGHTVGVIHSDRNQRERVEALEGFKSGKFEVLVATD 429
Query: 464 VAARGLDIPHVRHVI 508
+AARGLDI V HVI
Sbjct: 430 IAARGLDIAGVSHVI 444
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +++IV+ P+ RQTL FSAT P ++ LA L + V + +G+ S +E
Sbjct: 289 DMGFLPDVKRIVQ--QCPQA--RQTLFFSATLPPELAQLASWALRDPVEIKIGQRRSPAE 344
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
I+ V K L+DLL+
Sbjct: 345 TISHAFYPVVASQKFDLLIDLLS 367
Score = 39.5 bits (88), Expect = 0.085
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P + E+YVHRIGRTGR G A + + + AR +
Sbjct: 445 NYDVPENPEDYVHRIGRTGRANASGDAFTLVTEDDVRDARSI 486
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F ETKKGAD L L G+P IHGD+ Q ER L F++G+ PI++AT VA+R
Sbjct: 459 ILIFSETKKGADTLTRELRLDGWPALCIHGDKKQEERTWVLNEFKSGKHPIMIATDVASR 518
Query: 476 GLDIPHVRHVI 508
GLD+ V++VI
Sbjct: 519 GLDVRDVKYVI 529
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVG-ST 176
DMGFEPQIRKIV P +RQTLMFSAT+PK++ L++ L + V + +G + +T
Sbjct: 371 DMGFEPQIRKIVG-QIRP---DRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTT 426
Query: 177 SENITQKVVWVDEMDKRSFLLDLL 248
NI Q V ++E +KR L +LL
Sbjct: 427 CHNIEQNVFILEEREKRVKLKELL 450
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P +E+YVHRIGRTGR G G + +F AR+LV+L+ EA Q++P L
Sbjct: 530 NYDFPGQIEDYVHRIGRTGRAGMKGSSYTFLTPDKFKSARELVKLMREANQEIPPELQKL 589
Query: 688 A 690
A
Sbjct: 590 A 590
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++FV+TK+ ADQL + L + + +IHGD +QR+RE + FR I+VAT VAAR
Sbjct: 241 VIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDVAAR 300
Query: 476 GLDIPHVRHVI 508
GLDIPH +HVI
Sbjct: 301 GLDIPHTQHVI 311
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMG + Q+ +I + +P+ +RQ LMFSAT PK I ++Q +L N V + VG +
Sbjct: 157 DMGMKEQLEEINKF--LPE--KRQVLMFSATMPKHIIAVSQKYLNNPVRITVGATNKAAA 212
Query: 183 NITQKVVWVDEMDKRSFL 236
I Q+ + V + +K S L
Sbjct: 213 EIKQESMHVSDKEKFSAL 230
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN 603
N+DLP E+Y+HRIGRTGR G G A SF +
Sbjct: 312 NYDLPMCPEDYLHRIGRTGRAGATGHALSFIS 343
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF TK GAD++ +L + G P +IHG+++Q +RE AL FR G+ ILVAT +AARG
Sbjct: 254 LVFTRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDIAARG 313
Query: 479 LDIPHVRHV 505
+D+P V HV
Sbjct: 314 IDVPGVSHV 322
Score = 52.8 bits (121), Expect = 9e-06
Identities = 31/78 (39%), Positives = 49/78 (62%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF +R+I + +PK RQTL FSAT PK IQ L+ FL + V ++V ST+E
Sbjct: 167 DLGFIHALRRIDKL--LPKN--RQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAE 222
Query: 183 NITQKVVWVDEMDKRSFL 236
+ Q ++V++ +K++ L
Sbjct: 223 RVEQFGIFVNQSEKQALL 240
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N++LP+ E+YVHRIGRT R G G A SF + R R +E L K +
Sbjct: 324 NYELPNVAEQYVHRIGRTARAGRDGQAISFIANDERSYLRS-IERLTRVKLQI 375
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I+VFV TK+ ADQL L + +IHGD QR+R+ + FR G I+VAT VA+R
Sbjct: 243 IIVFVRTKQRADQLAYKLRKDNHSALAIHGDLKQRKRKRVINSFRRGHNQIMVATDVASR 302
Query: 476 GLDIPHVRHVI 508
GLDIPH++HVI
Sbjct: 303 GLDIPHIQHVI 313
Score = 43.6 bits (98), Expect = 0.005
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF QI I++ +PK RQ LMFSAT P I LA+ + ++V +TS
Sbjct: 159 DMGFGIQIEGIMKY--LPKM--RQNLMFSATLPGDIVKLAEKYSNQPERVSVENEATTSV 214
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q++++ E +K L+ L
Sbjct: 215 KIKQEIIYASESEKYGKLVTQL 236
Score = 36.7 bits (81), Expect = 0.60
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
N+D P Y+HR GRT R G G A SF ++
Sbjct: 314 NYDAPESQANYIHRTGRTARAGAEGYALSFITSQDK 349
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
++ + L+F TK+ AD+L L S+GY ++HGD +QRER+ + FR G T ILVAT
Sbjct: 239 QQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQGNTKILVAT 298
Query: 461 AVAARGLDIPHVRHV 505
+AARGLDI V HV
Sbjct: 299 DLAARGLDIELVTHV 313
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLAR 627
NFD+P D++ Y+HR+GRTGR G G+A + T L R
Sbjct: 315 NFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQIRLLR 354
Score = 41.5 bits (93), Expect = 0.021
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I+KI+ P+ ERQT +FSAT P +++ L F+ + + T
Sbjct: 159 DMGFLPDIQKILS--QCPR--ERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVP 214
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q V+ K L +++AQ
Sbjct: 215 EIEQYYYQVNSRRKIETLCRIIDAQ 239
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
++D ILVF KK A ++E++L +G V SIHGD Q +R +L F++G T +LVAT
Sbjct: 448 QKDDRILVFCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVAT 507
Query: 461 AVAARGLDIPHVRHVIILIYHLT 529
VAARGLDIP V+ VI + + LT
Sbjct: 508 DVAARGLDIPEVKLVINVTFPLT 530
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N P +E+YVHRIGRTGR G LG A + F + ++ + LV +L AKQ VP L
Sbjct: 524 NVTFPLTIEDYVHRIGRTGRAGKLGKAITLFTEHDKAHSGSLVNILRAAKQPVPEEL 580
Score = 45.2 bits (102), Expect = 0.002
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVG---RVGS 173
D GF I+ I+ P +RQTLMF+AT+P IQ LA+ ++ N + +G R G
Sbjct: 347 DRGFSEDIKLILS--GCPPKEQRQTLMFTATWPLDIQKLAESYMINPAQVTIGHRTRAGG 404
Query: 174 TSE-----------NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHVPKRINLYLCLWKLR 320
E I QKV VD K L +LL + RI L CL+K
Sbjct: 405 DGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLK-EAQKGSQKDDRI-LVFCLYKKE 462
Query: 321 KVRI 332
VR+
Sbjct: 463 AVRV 466
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L +VFV T++ AD++ E L +G+ ++HGD Q +RE ALR FR+G+ +LVAT VAA
Sbjct: 331 LAMVFVRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQREQALRAFRSGKVDVLVATDVAA 390
Query: 473 RGLDIPHVRHVI 508
RG+DI V HV+
Sbjct: 391 RGIDINGVTHVV 402
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+ P D Y+HRIGRTGR G GVA +F
Sbjct: 403 NYQCPEDENVYLHRIGRTGRAGESGVAITF 432
Score = 38.3 bits (85), Expect = 0.20
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGR--VGST 176
D+GF P + +I+ +P ERQT++FSAT P + LA+ F+ V + + G T
Sbjct: 245 DLGFLPDVERIMS--QLPT--ERQTMLFSATMPGPVISLARRFMKRPVHVRAEQPDEGRT 300
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNA 254
Q V +DK L +L A
Sbjct: 301 VPTTRQHVFRAHALDKMEVLARVLQA 326
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K LL E + ++FVETKK D++ + QG+ +IHGD++Q+ER+ L F
Sbjct: 391 KLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSF 450
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
R G+ ILVAT VAARGLD+ V+ VI
Sbjct: 451 RNGRHSILVATDVAARGLDVDDVKFVI 477
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI++ P +RQ LM+SAT+PK+++ LA++FL NY+ + +G + S +
Sbjct: 318 DMGFEPQIRKIMQ-QIRP---DRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSAN 373
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
NI Q V DE +K L+ LL
Sbjct: 374 HNILQIVDVCDENEKLMKLIKLL 396
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D PS+ E+YVHRIGRTGR N G A + F +N A DL+++L EA Q +
Sbjct: 478 NYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTI 530
>UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4;
Caenorhabditis|Rep: ATP-dependent RNA helicase glh-2 -
Caenorhabditis elegans
Length = 974
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 881 LDIKGVDHVI 890
Score = 66.5 bits (155), Expect = 6e-10
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A Q VP W+
Sbjct: 891 NYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE-DCNLLSELVRVLSDADQLVPEWM 946
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MPK RQTLMFSATFP +Q A++ L Y+ LA+ ++G+ ++
Sbjct: 719 MGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANK 778
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D +K+ LL++L
Sbjct: 779 CVLQEFEKCDRSEKKDKLLEIL 800
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +2
Query: 212 RNGQAFLFIGFTKCTNLLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGD 388
R Q+ +FI + LL ++ + +VF TK+GAD++ +YL + G +IHGD
Sbjct: 282 RIDQSLIFIEAQRKRPLLAELLADKSVERSIVFTRTKRGADRVAKYLVASGIEAAAIHGD 341
Query: 389 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHV 505
+ Q +RE AL F+ GQ L+AT +AARG+D+ V HV
Sbjct: 342 KTQGQRERALAAFKAGQVKALIATDIAARGIDVNDVSHV 380
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF IRKI +PK ERQ L FSAT P +I LA + L N +A+ +T E
Sbjct: 226 DLGFVVPIRKIAS--QLPK--ERQNLFFSATMPSEIGKLAGELLKNPAQVAITPSATTVE 281
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q +++++ KR L +LL
Sbjct: 282 RIDQSLIFIEAQRKRPLLAELL 303
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N++LP+ E YVHRIGRT R G G+A SF D R L +D+
Sbjct: 382 NYELPNVPESYVHRIGRTARKGKEGIAISFCADDERNLLKDI 423
>UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Dugesia
dorotocephala|Rep: Vasa-related protein PlVAS1 - Dugesia
dorotocephala
Length = 573
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K T+ ++ + D+ L+FVE+K+ AD L G+ T+IHGDR Q +RE AL F
Sbjct: 357 KVTSAIELIKTIPDEKTLIFVESKRMADFFGIKLGYLGFKATTIHGDREQEQRESALNDF 416
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
++G+ +VAT VAARGLDIP V +VI
Sbjct: 417 KSGRINFMVATNVAARGLDIPKVDNVI 443
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND-TNRGLARDLVELLVEAKQDVPNWLTS 684
N D+P ++ YVHRIGRTGR GN+G A SFF+D + GLA LV L EA Q V WL
Sbjct: 444 NIDMPDTIDTYVHRIGRTGRCGNVGRAISFFDDQKDLGLAGALVGKLQEANQPVEQWLRE 503
Query: 685 TAA 693
AA
Sbjct: 504 LAA 506
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 GFEPQIRKIV-ECHTMPKTGERQTL-MFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
GF + KI E H L MFSATFP +IQ LA L NY+FLAVG VGS +
Sbjct: 284 GFYEVVNKIYKEAHQSGDADRSIHLSMFSATFPNEIQTLASRLLSNYLFLAVGVVGSANC 343
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+++ ++ DK + ++L+
Sbjct: 344 DVKQEIIRAEQRDKVTSAIELI 365
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +2
Query: 278 PEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVA 457
P L L+FVETKK + L + G V +HGD QRER++ L+ F+ G+TP+LVA
Sbjct: 232 PTASFLTLIFVETKKDIGYIITKLLNAGLRVCEMHGDLEQRERQNNLKSFKDGKTPVLVA 291
Query: 458 TAVAARGLDIPHVRHVI 508
T VA RG+DI +RHVI
Sbjct: 292 TDVAQRGIDIGAIRHVI 308
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF-FNDTNRGLARDLVELLVEAKQDVPNWL 678
NFD P D++ Y+HRIGRTGR G G+ATSF DT + RDL +L+++KQ +P +L
Sbjct: 309 NFDFPKDIDTYIHRIGRTGRAGAEGLATSFILLDTPHYILRDLKNILLQSKQPLPKFL 366
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMP---KTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGS 173
DMGFEPQIR +V MP G RQTLMFSATF +Q +A+ +L+N + VG++GS
Sbjct: 135 DMGFEPQIRDLVYKFDMPGNGPNGNRQTLMFSATFGTGVQAMAKRYLHNEARIHVGQIGS 194
Query: 174 TSENITQKVVWVDE 215
T+ I Q+ + E
Sbjct: 195 TTTMIKQQFEYFAE 208
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/75 (49%), Positives = 53/75 (70%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I++FVETK+ D L ++ S G +IHGD++Q ER+ LR FR+G++ ILVAT VAAR
Sbjct: 533 IIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAAR 592
Query: 476 GLDIPHVRHVIILIY 520
GLD+ +++VI Y
Sbjct: 593 GLDVDGIKYVINFDY 607
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKIV P +RQTLM+SAT+PK+++ LA+DFL NY+ + +G + S +
Sbjct: 442 DMGFEPQIRKIVS-QIRP---DRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSAN 497
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
NI Q V DE K L LL+
Sbjct: 498 HNIRQVVDVCDEFSKEEKLKTLLS 521
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
NFD P + E+Y+HRIGRTGR G + +FF N A+ LV++L EA Q++
Sbjct: 604 NFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEI 656
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 77.0 bits (181), Expect = 5e-13
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L +VFVE K D++ E L +QG S+HG +Q ERE AL+ FR+ T ILVAT VA+
Sbjct: 373 LTIVFVERKTRCDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDVAS 432
Query: 473 RGLDIPHVRHVIIL 514
RGLD+ V HVI L
Sbjct: 433 RGLDVTGVSHVINL 446
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+I+ ++P+ + QTL+FSAT P +I+ LA+++L N V + VG+V S +
Sbjct: 280 DMGFEPQIREIMR--SLPE--KHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTT 335
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N++Q +V V +K LLDLL
Sbjct: 336 NVSQTLVKVSGSEKIDRLLDLL 357
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAK 657
N DLP E+Y+HRIGRTGR G+ G+ATSF+ D + L ++ + + +A+
Sbjct: 445 NLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVTNIRKAIADAE 494
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 77.0 bits (181), Expect = 5e-13
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K D + EYL +G +IHGD++Q ER A+R F G +LVAT VA++
Sbjct: 301 VLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASK 360
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 361 GLDFPDIQHVI 371
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT-NRGLARDLVELLVEAKQDV 666
NFD+P D+E YVHRIGRTGR G GVAT+F N + + DL LL+EAKQ +
Sbjct: 372 NFDMPEDIENYVHRIGRTGRCGKTGVATTFINKSCEESVLLDLKHLLMEAKQKI 425
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +R I +RQTL+FSAT PK+IQ A+ L V + VGR G+ S
Sbjct: 217 DMGFEEDVRTIFSYFK----SQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASL 272
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+V +V + K +LL+ L
Sbjct: 273 DVIQEVEYVKQEAKVVYLLECL 294
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
K + L Q R +E I++F TK+ DQL L ++ + +IHGD++Q ER+D L +
Sbjct: 392 KHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQ 450
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR+G+TP+LVAT VAARGLD+ +R V+
Sbjct: 451 FRSGRTPVLVATDVAARGLDVKDIRVVV 478
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D P+ VE+YVHRIGRTGR G G+A +FF D + A DL+++L A Q VP
Sbjct: 479 NYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVP 532
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGS--T 176
DMGFEPQIRKIV + +P +RQTLM++AT+PK+++ +A D L N + +G V
Sbjct: 321 DMGFEPQIRKIV--NEVPT--KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVA 376
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNAQ 257
+++ITQ + + M+K S L +L +Q
Sbjct: 377 NKSITQTIEVLAPMEKHSRLEQILRSQ 403
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K LL E + ++FVETK+ D + + G+ SIHGD++Q+ER+ L F
Sbjct: 356 KLMKLLTEISAENETKTIIFVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVLNAF 415
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
R G+ ILVAT VAARGLD+ V+ VI
Sbjct: 416 RNGRQGILVATDVAARGLDVEDVKFVI 442
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI+ P +RQ LM+SAT+PK+++ LA++FL +Y+ + +G + S +
Sbjct: 283 DMGFEPQIRKIMG-QIRP---DRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSAN 338
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNAQTCYN 269
NI Q V ++ +K L+ LL + N
Sbjct: 339 HNILQIVDVCEDYEKDQKLMKLLTEISAEN 368
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQ 660
N+D PS+ E+YVHRIGRTGR N G A + F ++N A DL+ +L EA Q
Sbjct: 443 NYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGDLINVLREANQ 493
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/90 (44%), Positives = 55/90 (61%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
LL++ + +LVF K A++LE +L +G+ SIHG++ Q ER +L F+ G
Sbjct: 357 LLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGS 416
Query: 440 TPILVATAVAARGLDIPHVRHVIILIYHLT 529
P+LVAT VAARGLDIP V VI + LT
Sbjct: 417 CPLLVATDVAARGLDIPDVEVVINYTFPLT 446
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/54 (57%), Positives = 37/54 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+ P E+YVHRIGRTGR G GVA +FF N+GLA +LV +L EA Q VP
Sbjct: 440 NYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVP 493
Score = 40.3 bits (90), Expect = 0.049
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGE-RQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVG-S 173
DMGFE +R I+ T + RQ +MFSAT+P + LAQ+F+ N + + +G V +
Sbjct: 279 DMGFEEPVRFILS-----NTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLA 333
Query: 174 TSENITQKVVWVDEMDKRSFLLDLLNAQTCYNVHVPKRINLYLCLWKLRKVRI 332
+ ++ Q + +DE + L+ LL Y+ R+ L L+K+ R+
Sbjct: 334 ANHDVMQIIEVLDERARDQRLIALLEK---YHKSQKNRV-LVFALYKVEAERL 382
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+E ++F +TKKG D++ E + ++GY V +HGD +Q R LR+F+ G LVAT
Sbjct: 243 DEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVAT 302
Query: 461 AVAARGLDIPHVRHVI 508
VAARG+D+ V HVI
Sbjct: 303 DVAARGIDVESVTHVI 318
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N+DLP D E YVHRIGRTGR GVA S
Sbjct: 319 NYDLPQDNESYVHRIGRTGRANREGVAYS 347
Score = 35.9 bits (79), Expect = 1.0
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
+MGF + +IV+ KT +RQTL+FSAT P QI+ LA++++ + +A+ + T
Sbjct: 162 NMGFIDDLEEIVKSL---KT-DRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTV 217
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
I Q + D+ L +L+
Sbjct: 218 SKIEQFYFEIKHRDRFETLCRVLD 241
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 76.2 bits (179), Expect = 8e-13
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E D LVF E K D++E +LY + V +IHG+R +R ALR+F TG+ I+VAT
Sbjct: 362 EVDGPTLVFAERKVSVDRIERFLYDEHTAVVAIHGERQMDQRLAALRQFTTGRANIMVAT 421
Query: 461 AVAARGLDIPHVRHVIIL 514
VA+RGLDI +V HVI L
Sbjct: 422 DVASRGLDISNVAHVINL 439
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
DMGFEPQ+++++ MP +RQT++FSATFP ++ LA+DF+ Y ++VG +
Sbjct: 279 DMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFMRPKYCRISVG-MQDAP 337
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
++I Q+ ++ EMDK S LL ++
Sbjct: 338 KSIEQRFIYCSEMDKFSELLGVI 360
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N DLP+D++ Y HRIGRTGR G G+ATSFFN++N L++ L +P L
Sbjct: 438 NLDLPTDLDTYTHRIGRTGRAGKHGLATSFFNESNNAFLAQLIQHLRSKNLPIPEGL 494
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/88 (45%), Positives = 52/88 (59%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
+K LL R + + L+FV+TK GA L + L +IHGDRNQ++R AL
Sbjct: 237 SKFALLLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAE 296
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
F+ G ILVAT VAARG+DI + HVI
Sbjct: 297 FKHGDVQILVATDVAARGIDIEKLSHVI 324
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I++++ + +RQ+LMFSATF +I+ LA L V + + +E
Sbjct: 169 DMGFLPDIKRVMAL----LSPQRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNE 224
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+I+ + WV K + LL L+ Q
Sbjct: 225 SISHVIHWVKPDSKFALLLHLIRQQ 249
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N++LP + E+YVHRIGRTGR G+ G A S ++ + L ++ +LL
Sbjct: 325 NYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEKELLANIEKLL 370
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF TK+ AD+ YL++ G+ V ++HGD++Q R L +F+ G+T ILVAT +AARG
Sbjct: 248 LVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILVATDIAARG 307
Query: 479 LDIPHVRHVIIL 514
LDI + VI L
Sbjct: 308 LDIKELPFVINL 319
Score = 49.6 bits (113), Expect = 8e-05
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I++IV+ +P+ +RQ L+FSAT+P ++ L L + + + + ST+
Sbjct: 162 DMGFIHDIKQIVKM--LPE--KRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTAL 217
Query: 183 NITQKVVWVDEMDKRSFLLD 242
NI Q+V+ VD DK+ LL+
Sbjct: 218 NIIQRVILVDR-DKKMELLN 236
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N +LP+ E+YVHRIGRTGR GN GVA S
Sbjct: 318 NLELPNVPEDYVHRIGRTGRAGNDGVAIS 346
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVF E K D + EYL +G +IHG ++Q ERE+A+ F+ G+ +LVAT VA++
Sbjct: 436 VLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASK 495
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 496 GLDFPDIQHVI 506
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVP 669
N+D+P+++E YVHRIGRTGR G G+AT+F N + DL LL EAKQ +P
Sbjct: 507 NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIP 561
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GFE IR++ + H +RQTL+FSAT PK+IQ A+ L V + VGR G+ +
Sbjct: 352 DLGFEDDIREVFD-HFK---AQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANL 407
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+V +V E + +LL+ L
Sbjct: 408 DVIQEVEYVKEDARIIYLLECL 429
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F +TKK D++ L G+P SIHGD+ Q ER+ L F++G++PI+ AT VAAR
Sbjct: 499 ILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAAR 558
Query: 476 GLDIPHVRHVI 508
GLD+ ++ VI
Sbjct: 559 GLDVKDIKCVI 569
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFD P+ +E+Y+HRIGRTGR G G A +FF +N +R+LV++L EA Q V L S
Sbjct: 570 NFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESM 629
Query: 688 A 690
A
Sbjct: 630 A 630
Score = 54.0 bits (124), Expect = 4e-06
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKIV P +RQTL +SAT+P++++ LA+ FL N + +G +
Sbjct: 412 DMGFEPQIRKIV-AQIRP---DRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKAN 467
Query: 183 NITQKVVWV-DEMDKRSFLLDLLN 251
+ Q+++ V E +K L LL+
Sbjct: 468 HSIQQIIEVISEHEKYPRLSKLLS 491
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Frame = +2
Query: 239 GFTKCTNLLQ-------RARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
G TK T LL+ + E+D L+FV+ ++ AD L L +GY S+HG + Q
Sbjct: 633 GDTKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCASLHGGKEQ 692
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+R++A++ F+ G PI+VAT+VAARGLD+ ++ VI
Sbjct: 693 VDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVI 729
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPN 672
N+D P+ +E+YVHR GRTGR GN G +F + D+V L +K +P+
Sbjct: 730 NYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPD 784
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+ KI+ + P Q ++FSATFPK ++ LA+ L + + VG +
Sbjct: 567 DMGFEPQVMKIIN-NVRPSA---QKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAP 622
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q+V D K + LL++L
Sbjct: 623 EIDQRVEVRDGDTKFTRLLEIL 644
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+ F TKKG D+L E L ++GY IHGD NQ +R + RF+ G +LVAT VAARG
Sbjct: 248 ICFCRTKKGVDELVEALQARGYQAEGIHGDMNQAQRNRVMSRFKEGYIELLVATDVAARG 307
Query: 479 LDIPHVRHV 505
LDI V HV
Sbjct: 308 LDISDVTHV 316
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAK 657
N+D+P D E YVHRIGRTGR G G A + R L+E +++A+
Sbjct: 318 NYDIPQDPESYVHRIGRTGRAGRTGTAITLVTPREFPQLR-LIERVIKAR 366
Score = 38.3 bits (85), Expect = 0.20
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I KI++ P ERQTL+FSAT P +I+ LA ++ + + ++V T
Sbjct: 162 DMGFIEDIEKILQ--NTP--AERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLTVP 217
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q V K L +L+ +
Sbjct: 218 QIDQYFCEVRPSFKTEALTRILDIE 242
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+ED L+FVE ++ AD L + L +GYP SIHG ++Q +R+ + F+ G PIL+AT
Sbjct: 845 DEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIAT 904
Query: 461 AVAARGLDIPHVRHVI 508
+VAARGLD+ ++ VI
Sbjct: 905 SVAARGLDVKQLKLVI 920
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D P+ +E+YVHR GRTGR GN GVA +F A + + L ++ Q +P+ L
Sbjct: 921 NYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRL 977
Score = 50.4 bits (115), Expect = 5e-05
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+ KI + P +RQT++FSAT P+ I L + L N + + VG ++
Sbjct: 761 DMGFEPQVMKIF-ANMRP---DRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAK 816
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q V DE K +L+LL
Sbjct: 817 EIEQIVEVRDEPSKFHRVLELL 838
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 74.9 bits (176), Expect = 2e-12
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P D+E YVHRIGRT R G+A +FF D N+ ++R L +++ +AKQ++P+WL +
Sbjct: 443 NYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNMSRKLAKIMTQAKQELPDWLKAL 502
Query: 688 A 690
A
Sbjct: 503 A 503
Score = 72.5 bits (170), Expect = 1e-11
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI+ H + +RQT+MFSAT+PK+IQ LA DFL + V + +G +T+
Sbjct: 286 DMGFEPQIRKIIG-HI---SKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTN 341
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
NI Q + +E +K S L++LN
Sbjct: 342 SNIKQVITKCEEFEKLSKCLEVLN 365
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F K + L+ +D I++F +TK+ D L+E L +G+ S+HGD+ Q +R+ L
Sbjct: 354 FEKLSKCLEVLNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLG 413
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
+FR+ + ILVAT VAARGLD+ + VI
Sbjct: 414 KFRSCKKGILVATDVAARGLDVNDIDIVI 442
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/76 (50%), Positives = 50/76 (65%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E I++F TK+ DQL L Q Y ++IHGD++Q ER+ L FR+G+ PILVAT
Sbjct: 474 EPGSKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVAT 532
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLDI +R V+
Sbjct: 533 DVAARGLDIKDIRVVV 548
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D P+ VE+YVHRIGRTGR G GVA +FF D + A DLV++L A Q V L
Sbjct: 549 NYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQL 605
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGS--T 176
DMGFEPQIRKIV+ PK RQTLMF+AT+PK+++ +A D L N V + +G
Sbjct: 391 DMGFEPQIRKIVK-QVQPK---RQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVA 446
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNAQ 257
+++ITQ V + +K L +L +Q
Sbjct: 447 NKSITQYVDVITPPEKSRRLDQILRSQ 473
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
EE + L+F TK+ L ++L ++GY + + GD +QR+RE+AL R R G+ +LVAT
Sbjct: 281 EEPESALIFANTKREVSYLNKFLSNKGYDIDEMSGDLSQRDREEALDRLREGKLRLLVAT 340
Query: 461 AVAARGLDIPHVRHVII 511
VAARG+D+ + HV I
Sbjct: 341 DVAARGIDVSDLSHVFI 357
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF P ++ IVE H G+R + M+SAT P +++ +A++FL + FL++ + E
Sbjct: 202 MGFYPDMKDIVE-HV---PGDRVSYMYSATMPPKVRSVAREFLDDPGFLSLSTDKVSVEE 257
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQ 257
+ V+ MDK + LL +
Sbjct: 258 NEYRYYLVNPMDKDRVMAQLLELE 281
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+D +++F TK+ + L + ++G+ V S+HGD++Q +RE +LR+F + P+++AT
Sbjct: 296 DDSRVVIFANTKRRVENLAKTFSAEGFGVVSVHGDKSQADREASLRKFIDNKCPLMMATD 355
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDI V HVI
Sbjct: 356 VAARGLDIKGVTHVI 370
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
N+D+ DVE YVHRIGRTGR G LG A +F+N D ++ L ++ +A Q VP+WL
Sbjct: 371 NYDMARDVESYVHRIGRTGRAGELGAAVTFWNCDYDKPCTAALCKIARDAGQVVPDWL 428
Score = 43.6 bits (98), Expect = 0.005
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL------YNYVFLAVG- 161
DMGFEPQI+ I RQTL+FSAT+PK ++ LA +L VF+ G
Sbjct: 205 DMGFEPQIKTIFGA----TPASRQTLLFSATWPKSVRKLAACYLNQDKSRVREVFIGEGA 260
Query: 162 RVGSTSEN--ITQKVVWVDEMDKRSFLLDLL 248
+ G + N ITQ+ V + +K L +L+
Sbjct: 261 QDGELAANKAITQRFVEARDHEKDEHLYNLI 291
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
LQ+ +P +L+F + D + EYL +G VTS+HG + Q ER A++ F+ Q
Sbjct: 399 LQKTKPP----VLIFCDKSNDVDDIHEYLLLKGIDVTSLHGGKKQEERTKAMKEFQQSQK 454
Query: 443 PILVATAVAARGLDIPHVRHVI 508
+LVAT + A+GLD P+V+HVI
Sbjct: 455 DVLVATDIGAKGLDFPNVQHVI 476
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
NFD+P ++E YVHRIGRTGR+G G AT+F N + + DL LL+EAKQ +P++L
Sbjct: 477 NFDMPKEIESYVHRIGRTGRLGKTGRATTFVNKQQDENILSDLKMLLMEAKQPIPHFLKQ 536
Query: 685 TAAD 696
D
Sbjct: 537 ITHD 540
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DM FE +IR I++ H G RQTL+FS+T PK++Q A+ L + + + VGR G +
Sbjct: 322 DMIFEKEIRNIID-HV---PGARQTLLFSSTMPKKVQDFAKQALIDPIIVNVGRAGQVNL 377
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+ Q+V +V + +K +L+ L
Sbjct: 378 NVIQEVEYVKQEEKLQYLISCL 399
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P D+E+YVHRIGRT R GVA +FF D NR LA DLVE++ + Q P+WL++
Sbjct: 404 NYDFPGDIEDYVHRIGRTARGEKTGVAITFFTDENRFLASDLVEVIKNSAQVPPDWLSAM 463
Query: 688 A 690
A
Sbjct: 464 A 464
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
KC +L+ + + I++F +TK+ QL ++L S+ SIHGD+ Q+ER AL +F
Sbjct: 319 KCVEILKE---NQSKKIIIFAKTKRTVQQLSDFLKSKSIRCLSIHGDKTQQERVVALDKF 375
Query: 428 RTGQT-PILVATAVAARGLDIPHVRHVI 508
+ +T +LVAT VAARGLD+ + V+
Sbjct: 376 KNARTGGVLVATDVAARGLDVTDIDLVL 403
Score = 64.5 bits (150), Expect = 3e-09
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAV-GRVGSTS 179
DMGFEPQIR I+ T +R+T MFSAT+PK+I+ LA DFL N + + V G +T+
Sbjct: 246 DMGFEPQIRAIIASLTK----DRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATN 301
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
E I Q V+ + E +K +++L
Sbjct: 302 ERIQQNVLLLQEHEKGEKCVEIL 324
>UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: PUTATIVE ATP-DEPENDENT RNA
HELICASE - Encephalitozoon cuniculi
Length = 503
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVFVE K ++E+ L G S+HGD+ Q +R++AL+ FR G+ P++VAT+VAAR
Sbjct: 342 VLVFVERKSECGEVEKVLKKSGILCVSLHGDKEQADRDEALKGFRNGRFPVMVATSVAAR 401
Query: 476 GLDIPHVRHVI 508
G+DI V+ VI
Sbjct: 402 GIDIKDVKLVI 412
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P D++EY+HRIGRTGR G G + SF++ L + LVE+L E+K VP +LT
Sbjct: 413 NYDIPKDIKEYIHRIGRTGREGKSGKSISFYDGGMTADLKKALVEVLRESKNAVPPFLTG 472
Query: 685 TA 690
+
Sbjct: 473 AS 474
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F T LL PE L +VF TK+ D+L E L +GY IHGD Q +R ALR
Sbjct: 229 FDTLTRLLDIQSPE---LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALR 285
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
+F+ G +LVAT VAARGLDI V HV
Sbjct: 286 KFKEGAIEVLVATDVAARGLDISGVTHV 313
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD 663
NFD+P D E YVHRIGRTGR G G+A +F + + R +E + K D
Sbjct: 315 NFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLR-AIEQTTKRKMD 365
Score = 39.5 bits (88), Expect = 0.085
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ +P E QTL+FSAT P I+ +A+ F+ + V T
Sbjct: 159 NMGFIDDIESILS--NVPS--EHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVS 214
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQT 260
NI Q + V E K L LL+ Q+
Sbjct: 215 NIQQFYLEVQERKKFDTLTRLLDIQS 240
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/88 (47%), Positives = 50/88 (56%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F T LL PE L +VF TK+ D+L E L +GY IHGD Q +R LR
Sbjct: 228 FDVLTRLLDIQSPE---LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLR 284
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
+F+ G +LVAT VAARGLDI V HV
Sbjct: 285 KFKEGSIEVLVATDVAARGLDISGVTHV 312
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD 663
NFD+P D E YVHRIGRTGR G G+A F G ++ +E + K D
Sbjct: 314 NFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKN-IERTTKRKMD 364
Score = 39.1 bits (87), Expect = 0.11
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ +P+T QTL+FSAT P I+ +A+ F+ + V T
Sbjct: 158 NMGFIEDIEAILT--DVPET--HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP 213
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQT 260
NI Q + V E K L LL+ Q+
Sbjct: 214 NIQQFYLEVQEKKKFDVLTRLLDIQS 239
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F TK+ DQL L Q + ++IHGD++Q ERE L FR+G++PILVAT VAAR
Sbjct: 398 VLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAAR 456
Query: 476 GLDIPHVRHVI 508
GLDI +R VI
Sbjct: 457 GLDIKDIRVVI 467
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P+ +E+YVHRIGRTGR G GVA +FF D + A DL+++L A Q VP L
Sbjct: 468 NYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADM 527
Query: 688 AA 693
A+
Sbjct: 528 AS 529
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKIV+ +P RQTLM++AT+PK+++ +A+D L + V + +G V
Sbjct: 310 DMGFEPQIRKIVK--EIPP--RRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVA 365
Query: 183 N--ITQKVVWVDEMDKRSFLLDLLNAQ 257
N ITQ V + +K L +L +Q
Sbjct: 366 NSAITQNVELITPSEKLRRLEQILRSQ 392
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
+L++VFV TK D + + L S + ++HG++ Q +RE AL+ FR G+T +LVAT VA
Sbjct: 532 KLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDVA 591
Query: 470 ARGLDIPHVRHVI 508
ARGLDIP V VI
Sbjct: 592 ARGLDIPDVSLVI 604
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 PKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVW-VDEMDKRS 230
P RQT+M+SAT P ++ +A+++L + + +G +G + + Q+ +W V E ++R+
Sbjct: 460 PNLRYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRN 519
Query: 231 FLLDLLN 251
L +LN
Sbjct: 520 KLRAMLN 526
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD-VPNWL 678
NF++ +E Y HRIGRTGR G G+A +F + G+ L +++ +++ VP WL
Sbjct: 605 NFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGVLYHLKQIMSKSQMSKVPPWL 662
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/87 (47%), Positives = 52/87 (59%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
T L+ PE+ +I FV K AD L L QG PV S+HG+R Q +RE AL
Sbjct: 538 TLIQEFLRNLAPEDKAII--FVSRKLVADDLSSDLSIQGVPVQSLHGNREQFDREQALDD 595
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHV 505
FR+G+ IL+AT +AARGLD+ V HV
Sbjct: 596 FRSGRVKILIATDLAARGLDVRDVTHV 622
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P ++EEYVHR+GRTGR G GV+ + + +A +L+++L A Q VP L
Sbjct: 624 NYDSPKNLEEYVHRVGRTGRAGKTGVSVTLMTQADWKIATELIKILERANQSVPEDLLKM 683
Query: 688 A 690
A
Sbjct: 684 A 684
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTS- 179
D+GFE QI KI+ + +RQT+M SAT+P I+ LA+ +L + + VG + +
Sbjct: 466 DLGFEGQITKIL----LDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAV 521
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
+ Q ++ E +KR+ + + L
Sbjct: 522 HTVKQDIIVTTEEEKRTLIQEFL 544
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F +TK +L + L +G+P S+HGD++Q+ERE L++F+ Q ++VAT VAARG
Sbjct: 295 IIFCQTKMEVAELADVLTQRGFPADSLHGDKSQQEREATLKKFKQRQVKVIVATDVAARG 354
Query: 479 LDIPHVRHVIILIYHLTWKNTS 544
LDI + HV+ + L W + S
Sbjct: 355 LDIKDLTHVV--NHSLPWDSES 374
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVE 639
N LP D E YVHRIGRTGR G G A + N L R +++
Sbjct: 365 NHSLPWDSESYVHRIGRTGRNGQKGTAITLVNPEQLTLLRRVMQ 408
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGER-----QTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG 170
MGF+ + I+ T P + +T +FSAT +++ L +L N ++V +VG
Sbjct: 202 MGFKEALETILSA-TQPDDSDSVRAACRTWLFSATMSSEVRRLTSTYLENPETVSVNKVG 260
Query: 171 STSENITQ 194
T++ I Q
Sbjct: 261 GTADTIEQ 268
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVF TK GAD++ + L +G+ +IHG+++Q RE AL F+ +T ILVAT +AAR
Sbjct: 248 VLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILVATDIAAR 307
Query: 476 GLDIPHVRHVI 508
GLDI + HVI
Sbjct: 308 GLDIQELSHVI 318
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N++LP E Y+HRIGRTGR G G A +F + + L RD+
Sbjct: 319 NYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDI 360
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMG +++I+ +P+ ERQ ++FSAT P +I+ LA L V +A+ S +
Sbjct: 163 DMGMLHDVKRIITY--LPR--ERQNMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLD 218
Query: 183 NITQKVVWVDEMDKRSFL 236
I Q+V +VD+ +K + L
Sbjct: 219 IIEQEVYFVDKANKAALL 236
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
LL+ EE LVF TK GAD+L + L G+ +IHGDR+Q +R AL+ F+ G
Sbjct: 232 LLEMMLREEQGSFLVFARTKHGADKLAKKLAQSGFKSAAIHGDRSQNQRIQALKGFQEGY 291
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
+LVAT VAARG+ + + HV+
Sbjct: 292 YRVLVATDVAARGIHVEGISHVV 314
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I++I+ MP ERQTL+FSAT ++ L + + N V + +G + SE
Sbjct: 160 DMGFLPTIKRIIAA--MP--AERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSE 215
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ + VD+ D++ LL+++
Sbjct: 216 QVDLHLYEVDQ-DRKFGLLEMM 236
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFDLP E+++HR+GRTGR G G A++F + R
Sbjct: 315 NFDLPQVPEDFIHRVGRTGRAGAKGTASTFATRSER 350
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
+L + E Q+I +F TK+ A+ L L GYP ++HGD++Q R L RFR G
Sbjct: 237 VLDEGKSETGQVI-IFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGD 295
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
+LVAT VAARGLDI + HVI
Sbjct: 296 LKVLVATDVAARGLDIDGITHVI 318
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+DLP E+YVHRIGRTGR G G A SFF+ +R + R +
Sbjct: 319 NYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADRDIVRSI 360
Score = 42.3 bits (95), Expect = 0.012
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I IV +PK RQ+L+FSAT P +IQ LA F + V + V S+
Sbjct: 160 DMGFLPDINTIVR--QLPKG--RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSD 215
Query: 183 NITQKVVWVDEMDKRSFLL 239
+I Q+ + V ++ LL
Sbjct: 216 HIHQEWITVSHGSQKLGLL 234
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F T KG DQ+ L G+P SIHGD++Q ER+ L F+ G++PI+ AT VAAR
Sbjct: 318 ILIF-RTLKGCDQVTRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 376
Query: 476 GLDIPHVRHVI 508
GLD+ V+ VI
Sbjct: 377 GLDVKDVKFVI 387
Score = 63.3 bits (147), Expect = 6e-09
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D P +E+YVHRIGRTGR G G A +FF N A+DLV +L EA Q V
Sbjct: 388 NYDFPGSLEDYVHRIGRTGRAGASGTAYTFFTAANARFAKDLVNILEEAGQKV 440
Score = 39.9 bits (89), Expect = 0.064
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQI 110
DMGFEPQIRK + T +RQTL +SAT+PK +
Sbjct: 256 DMGFEPQIRKCIS-----DTPDRQTLYWSATWPKNV 286
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F K L + + ++ +LVF + K+ AD+LE L GY +IHGD+ QR+RE L
Sbjct: 330 FAKQDELRKLMQEHREERVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFILA 389
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
RFR LVAT VAARGLDI + VI
Sbjct: 390 RFRKDPRLCLVATDVAARGLDIKQLETVI 418
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQ+RKI C + +RQT+MFSAT+P++IQ LA +F ++ ++VG +
Sbjct: 262 DMGFEPQVRKI--CGQIRP--DRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQAN 317
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
+++TQ+ + E K+ L L+
Sbjct: 318 KDVTQRFILTQEFAKQDELRKLM 340
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLG----VATSFFNDTNRGLARDLVELLVEAKQDVPNW 675
N+D P +++YVHRIGRTGR G G + T + ++L+ +L A+Q++P+W
Sbjct: 419 NYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITPSVLKELIGILERAQQEIPDW 478
Query: 676 L 678
+
Sbjct: 479 M 479
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF TK GAD + +L Y V +IHG+++Q R+ AL FR G ILVAT +AAR
Sbjct: 333 VIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATDIAAR 392
Query: 476 GLDIPHVRHVI 508
G+D+P + HV+
Sbjct: 393 GIDVPGISHVV 403
Score = 50.0 bits (114), Expect = 6e-05
Identities = 32/82 (39%), Positives = 45/82 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF +++I + ERQT +FSAT PK+I LA+ L + V + V G+T+
Sbjct: 248 DMGFINDVKRIAKA----THAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGATAS 303
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
ITQ V V +KR L +L
Sbjct: 304 EITQVVHPVPTKEKRRLLSAML 325
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+DLP + E YVHRIGRTGR G G + + ++ VE + +K +
Sbjct: 404 NYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKLRAVERVTRSKLSI 456
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK+ A ++ + L +G+ V ++HGD Q RE AL+ FRTG+ +LVAT VAARG
Sbjct: 264 MIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVAARG 323
Query: 479 LDIPHVRHVI 508
+DI + HVI
Sbjct: 324 IDIDDITHVI 333
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NF +P D + YVHRIGRTGR G GVA +
Sbjct: 334 NFQIPEDEQAYVHRIGRTGRAGKTGVAVT 362
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY--NYVFLAVGRVGST 176
D+GF P I +I+ P T RQ ++FSAT P I LA+ F+ ++ + +T
Sbjct: 176 DLGFLPDIERILR--QTPDT--RQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSAT 231
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNAQ 257
+ Q +DK + +L A+
Sbjct: 232 HDTTAQFAYRAHALDKVEMVSRILQAE 258
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 73.7 bits (173), Expect = 4e-12
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F T LL PE L +VF TK+ D+L E L +GY IHGD +Q +R LR
Sbjct: 228 FDILTRLLDIQAPE---LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLR 284
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
+F+ G ILVAT VAARGLDI V HV
Sbjct: 285 KFKEGAIEILVATDVAARGLDISGVTHV 312
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
NFD+P D E YVHRIGRTGR G GVA +F
Sbjct: 314 NFDIPQDPESYVHRIGRTGRAGKTGVAMTF 343
Score = 41.1 bits (92), Expect = 0.028
Identities = 31/85 (36%), Positives = 41/85 (48%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ H ERQTL+FSAT P I+ +A+ F+ + V T
Sbjct: 158 NMGFIEDIEAILS-HV---PAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVP 213
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
NI Q + V E K L LL+ Q
Sbjct: 214 NIQQYYLEVHEKKKFDILTRLLDIQ 238
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/88 (46%), Positives = 52/88 (59%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F TN L +PE L +VF TK+ D+L L S+GY +HGD Q +R + L+
Sbjct: 228 FDTFTNFLDVHQPE---LAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLK 284
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
+F+ Q ILVAT VAARGLDI V HV
Sbjct: 285 KFKNDQINILVATDVAARGLDISGVSHV 312
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
NFD+P D E Y HRIGRTGR G G+A +F N R +
Sbjct: 314 NFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 355
Score = 37.5 bits (83), Expect = 0.34
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF +R I++ +P +RQT++FSAT PK IQ L Q F+ + + +
Sbjct: 157 NMGFIDDMRFIMD--KIPAV-QRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDP 213
Query: 183 NITQKVVWVDEMDK 224
I + V E++K
Sbjct: 214 QIEEFYTIVKELEK 227
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
ILVF KK A +LE + GY V ++HGD Q R AL F+TGQ +LVAT VAAR
Sbjct: 442 ILVFALYKKEAQRLEYTIRRAGYAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAAR 501
Query: 476 GLDIPHVRHVIILIYHLT 529
GLDIP V VI + + LT
Sbjct: 502 GLDIPDVGLVINVTFPLT 519
Score = 50.0 bits (114), Expect = 6e-05
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
D GFE IR+I+ HT RQT+MFSAT+P+ ++ LA FL N + + VG S +
Sbjct: 343 DAGFENDIRRII-AHTPGHKEGRQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSAN 401
Query: 180 ENITQKVVWVDEMDKRSFLL 239
+ I Q V +D + F L
Sbjct: 402 KRIEQIVEVLDNPRDKDFRL 421
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTN--RGLARDLVELLVEAKQDVP 669
N P E++VHR GRTGR G G A +FF N + LA + + +L + ++P
Sbjct: 513 NVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRVLRDVGAEIP 568
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
LL + E +LVFV+ K GA+++ + L G IHGD++Q +R+ AL F+ G
Sbjct: 238 LLHILKDESLSKVLVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFKNGD 297
Query: 440 TPILVATAVAARGLDIPHVRHVIIL 514
+LVAT +AARG+DI + HVI L
Sbjct: 298 VRVLVATDIAARGIDIDGITHVINL 322
Score = 57.6 bits (133), Expect = 3e-07
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI+ +P+ +R L FSAT P +IQ LA L N + V V ST+E
Sbjct: 165 DMGFMQDIKKILPL--LPQ--KRHNLFFSATMPHEIQTLANRILVNPKKVEVTPVSSTAE 220
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYN--VHVPKRINLYLCLWKLRKVRIN*KNIYIP 356
+ Q+V++VD+ K LL +L ++ V V + + +L K + I+
Sbjct: 221 KVEQRVMFVDKPQKLDLLLHILKDESLSKVLVFVQMKYGANRVVDRLTKAGVAAAGIHGD 280
Query: 357 KA-TR*HRSMETVTNVNVKML 416
K+ + R++E N +V++L
Sbjct: 281 KSQNQRQRALEEFKNGDVRVL 301
Score = 39.5 bits (88), Expect = 0.085
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N +LP E YVHRIGRT R G G++ SF
Sbjct: 321 NLELPHIPESYVHRIGRTARAGATGISISF 350
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 73.3 bits (172), Expect = 6e-12
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFIGFTKCTNLLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q FLF + + L R ED Q ++VFV TK +++ E L G +IHGD Q
Sbjct: 222 QRFLFASVHQKPDALIRVLEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQ 281
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
RE + +F+ G ILVAT VAARGLD+ V HVI
Sbjct: 282 SLRERIIAQFKQGAIDILVATDVAARGLDVERVTHVI 318
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P D E YVHRIGRTGR G GV F
Sbjct: 319 NYDMPHDNETYVHRIGRTGRAGRSGVTILF 348
Score = 33.5 bits (73), Expect = 5.6
Identities = 23/91 (25%), Positives = 46/91 (50%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF + I+E +P+ ++Q +FSAT P +I+ +A +L + + + +T ++
Sbjct: 164 MGFIEDVETILE--KLPE--KKQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKS 219
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQTCYNVHV 278
I Q+ ++ K L+ +L + V V
Sbjct: 220 IEQRFLFASVHQKPDALIRVLEVEDYQGVIV 250
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E++ LVF TK+G ++L + L G+ IHGDR+Q +R AL F G +LVAT
Sbjct: 263 EQEGKTLVFARTKRGTERLAKELIRDGFSAAMIHGDRSQSQRNAALAAFDKGSIKVLVAT 322
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLD+ + HVI
Sbjct: 323 DVAARGLDVDDIAHVI 338
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/85 (34%), Positives = 45/85 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I++I+ +P+ ++QTL FSAT + + QD LYN V + +G + +
Sbjct: 184 DMGFLPAIKRILRA--LPR--DKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAA 239
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+ + V M K+ L LL Q
Sbjct: 240 AVELHAIEVPIMGKKDALRQLLYEQ 264
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NFDLP E+++HR+GRTGR G G+ATS
Sbjct: 339 NFDLPQVPEDFIHRVGRTGRAGATGMATS 367
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK GAD++ +L G +IHG+++Q +RE AL +FR+G+ +LVAT +AARG
Sbjct: 304 IVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAARG 363
Query: 479 LDIPHVRHVI 508
+D+ +V HV+
Sbjct: 364 IDVDNVSHVV 373
Score = 46.4 bits (105), Expect = 7e-04
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF P IR+I+ +P+ +RQ +MFSAT PK I+ LA +FL + +AV +
Sbjct: 218 DLGFIPAIRQIMA--KLPR--QRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVD 273
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q+V+ + +K+ L LL
Sbjct: 274 RIDQQVLLLAPEEKKDKLAWLL 295
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NF+LP+ E YVHRIGRT R G GVA S + RD+ L+
Sbjct: 374 NFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDIETLI 419
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L ++F TK+ AD++ L +G+ V ++HGD Q RE ALR FRTG+ LVAT VAA
Sbjct: 356 LTMIFTRTKRAADRVAADLDFRGFAVAAVHGDLGQGARERALRAFRTGKIDTLVATDVAA 415
Query: 473 RGLDIPHVRHVI 508
RG+D+ V HV+
Sbjct: 416 RGIDVSGVTHVL 427
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D P D + Y HRIGRTGR G GVA +F
Sbjct: 428 NYDCPEDQDTYTHRIGRTGRAGASGVAVTF 457
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF + +I+ +P+ +RQT++FSAT P I L++ FL V + G T
Sbjct: 270 DLGFLDDVERILAI--LPE--DRQTMLFSATMPDPIVALSRRFLRRPVTIHAGHTAETGP 325
Query: 183 N-ITQKVVW-VDEMDKRSFLLDLLNAQ 257
+ TQ++ + ++K + +L A+
Sbjct: 326 SPQTQQLAYRTHSLNKIEIVARILQAR 352
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 73.3 bits (172), Expect = 6e-12
Identities = 29/70 (41%), Positives = 49/70 (70%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F +TKKG + + L +G+ +IHGD+ Q++R+ + +F++G+ IL+AT VA+R
Sbjct: 350 VLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASR 409
Query: 476 GLDIPHVRHV 505
GLD+ V HV
Sbjct: 410 GLDVKDVSHV 419
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVP 669
N+D P +E+YVHRIGRTGR G G A SF + ++ ++R+ V++L +AKQ++P
Sbjct: 421 NYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKISREYVQMLHDAKQEIP 475
Score = 56.8 bits (131), Expect = 5e-07
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNY-VFLAVGRVG-ST 176
DMGFE QIRKI+ P +RQTLMFSAT+PK +Q LAQD+ N V++ +G+ +
Sbjct: 262 DMGFEIQIRKILG-QIRP---DRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAI 317
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNAQT 260
+E I Q V D+ K + L+ L+ T
Sbjct: 318 NERIKQIVYVTDQSKKINQLIKQLDCLT 345
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 73.3 bits (172), Expect = 6e-12
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
F T LL + +PE L +VFV T+ +L + L +GY +HGD Q +RE+ L
Sbjct: 228 FEALTRLLDQEKPE---LAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLD 284
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
+F+ G+ ILVAT VAARGLDI V HV
Sbjct: 285 KFKAGEVSILVATDVAARGLDIQGVTHV 312
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVE 651
NFD+P D + YVHRIGRTGR GN G AT+F ++ A + +E ++
Sbjct: 314 NFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDK-TALEAIEQAID 360
Score = 39.5 bits (88), Expect = 0.085
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF + KI++ +P+ RQTL+FSAT +Q+LA+ +L + + G T
Sbjct: 158 DMGFIDEAEKILK--KLPE--RRQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVP 213
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
Q + + E K L LL+ +
Sbjct: 214 TTVQYYIEMPEKQKFEALTRLLDQE 238
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 73.3 bits (172), Expect = 6e-12
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K D + EYL +G +IHG ++Q +RE A+ F+ G+ +LVAT VA++
Sbjct: 400 VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASK 459
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 460 GLDFPDIQHVI 470
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVP 669
N+D+P+++E YVHRIGRTGR G G+AT+F N + + DL LL EAKQ +P
Sbjct: 471 NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 525
Score = 56.8 bits (131), Expect = 5e-07
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GFE IR++ + H +RQTL+FSAT P +IQ+ A+ L V + VGR G+ +
Sbjct: 316 DLGFEDDIREVFD-HFK---SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANL 371
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q+V +V + K +LL+ L
Sbjct: 372 DVIQEVEYVKQEAKIVYLLECL 393
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +2
Query: 239 GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
G TK T L + A E +++FV T+ + E L GYP +++GD NQ +RE +
Sbjct: 238 GITKMTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCI 297
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ ++G++ ILVAT V ARGLDIP + VI
Sbjct: 298 DQMKSGKSSILVATDVVARGLDIPRISLVI 327
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+DLP D E YVHRIGRTGR G G++ +F
Sbjct: 328 NYDLPGDNEAYVHRIGRTGRAGREGMSIAF 357
Score = 35.9 bits (79), Expect = 1.0
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I+ I++ H +PKT Q +FSAT P I+ +A FL + + V V
Sbjct: 172 NMGFLEDIQWILD-H-IPKTA--QMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKA 227
Query: 183 NITQKVVWVDEMDKRSFL 236
NITQ V + K + L
Sbjct: 228 NITQYAWKVSGITKMTAL 245
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K+ D + EYL +G +IHG ++Q ER A+ +R G+ +LVAT VA++
Sbjct: 431 VLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASK 490
Query: 476 GLDIPHVRHVI 508
GLD P+V+HVI
Sbjct: 491 GLDFPNVQHVI 501
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P D+E YVHRIGRTGR G+AT+ N T + + DL LL+E KQ+VP++L
Sbjct: 502 NYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDE 561
Query: 685 TAAD 696
A +
Sbjct: 562 LAPE 565
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/82 (46%), Positives = 50/82 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +R I G+RQTL+FSAT PK+IQ A+ L V + VGR G+ S
Sbjct: 347 DMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASM 402
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+TQ+V +V + K +LLD L
Sbjct: 403 NVTQQVEYVKQEAKVVYLLDCL 424
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+E + LVF +TK+ A+ L + L G+ T+IHG+++Q R+ AL FR Q +LVAT
Sbjct: 243 DEVERALVFTKTKRTANTLSQRLVRSGFKATAIHGNKSQGARQQALEAFRRKQVQVLVAT 302
Query: 461 AVAARGLDIPHVRHVI 508
VAARG+DI + HVI
Sbjct: 303 DVAARGIDIDGITHVI 318
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFDLP + E YVHRIGRTGR G G+A SF +++ R R + L+
Sbjct: 319 NFDLPVEPEAYVHRIGRTGRAGANGIAISFCSESERKELRSIERLI 364
Score = 39.9 bits (89), Expect = 0.064
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +++I+ +P +RQ+L FSAT +I LA L V + V ++ E
Sbjct: 163 DMGFLPDLKRIIT--QLPT--QRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSVE 218
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q++++V+ K+ L +L
Sbjct: 219 KIQQQLMFVERNFKQPLLQKIL 240
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K L++ R + +L+F TK A L + L GY T++ G+ +Q R+ AL F
Sbjct: 226 KTALLIELLRHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGF 285
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
R+G+ ILVAT +AARG+D+ H+ HVI
Sbjct: 286 RSGRYQILVATDIAARGIDVAHISHVI 312
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +R+I+ +RQT++FSAT P I+ LA++ L + +GR S
Sbjct: 158 DMGFLPDVRRILRL----APAQRQTMLFSATMPDAIRALAREALREPQTIQIGRSAPVS- 212
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+T + V E K + L++LL
Sbjct: 213 TVTHAIYPVAEHLKTALLIELL 234
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVE--AKQDVPNWLT 681
N+D+P E Y HRIGRTGR G A + ++ G+ R + L+ E ++ VP +
Sbjct: 313 NYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMVRAIERLIGEPLKRETVPGFDY 372
Query: 682 STAA 693
AA
Sbjct: 373 HAAA 376
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF +TK GAD+L + L + G +IHG++ Q +R AL FR+G+ +LVAT VAARG
Sbjct: 243 LVFTKTKHGADRLAKELNASGIRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAARG 302
Query: 479 LDIPHVRHVI 508
+D+ V HV+
Sbjct: 303 IDVDGVTHVV 312
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P ++ IV +PK +RQT+ F+AT P ++ LA L N V + V +T+E
Sbjct: 157 DMGFMPALKTIVS--KLPK--QRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPESTTAE 212
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+ Q++++V + DKR+ L L A+
Sbjct: 213 RVEQRLMYVSQGDKRALLEHSLQAE 237
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFDLP D E YVHRIGRTGR G G+A SF + + G R + L+
Sbjct: 313 NFDLPIDPESYVHRIGRTGRAGKEGIALSFCDFSEHGTLRAIERLI 358
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F E + D + EYL +G V +HG + Q +R AL++F GQ +LVAT VAA+
Sbjct: 371 VVIFSEHQNDVDDINEYLLIKGVEVVGLHGGKQQEDRTKALKQFLNGQKDVLVATDVAAK 430
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 431 GLDFPDIKHVI 441
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P D+E Y+HRIGRTGR G G AT+F N + DL LLVE+KQ +P +L
Sbjct: 442 NYDMPKDIESYIHRIGRTGRQGKTGRATTFVNRQQEESILLDLKYLLVESKQKIPQFLEK 501
Query: 685 TAAD 696
+D
Sbjct: 502 LKSD 505
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D FE +IR I+E H TG RQT++FSAT PK+IQ + L + + + VGR G +
Sbjct: 287 DQVFELEIRNILE-HF---TGPRQTMLFSATLPKKIQEFTKQTLVDPLVINVGRSGQINL 342
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQT 260
N+ Q++++V + +K +LLD L T
Sbjct: 343 NVIQEILYVKQEEKLHYLLDCLKKTT 368
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/76 (42%), Positives = 52/76 (68%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+ED L+FV+ ++ AD L + L +GYP SIHG ++Q +R+ + F+ G PI++AT
Sbjct: 802 DEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIAT 861
Query: 461 AVAARGLDIPHVRHVI 508
+VAARGLD+ ++ V+
Sbjct: 862 SVAARGLDVKQLKLVV 877
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
NFD P+ +E+YVHR GRTGR GN G A +F + + + + L ++ Q+VP+ L
Sbjct: 878 NFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKALEQSGQEVPDRL 934
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+ K+ + P RQT++FSAT P+ + LA+ L + V + VG +
Sbjct: 718 DMGFEPQVMKVFN-NIRPN---RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAP 773
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
ITQ V +E +K LL+LL
Sbjct: 774 EITQIVEVREEKEKFHRLLELL 795
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
++ +VFV TKK D + + L GY VT++HG ++Q +RE +L FR + +LVAT V
Sbjct: 576 EKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDV 635
Query: 467 AARGLDIPHVRHVI 508
RG+DIP V HVI
Sbjct: 636 VGRGIDIPDVAHVI 649
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D+P +E Y HRIGRTGR G GVATSF + + DL ++LV++ VP
Sbjct: 650 NYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVP 703
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Frame = +3
Query: 3 DMGFEPQIRKIVEC----HTMPKTGE---------RQTLMFSATFPKQIQLLAQDFLYNY 143
DMGFEPQ+ +++ + P+ E R T MFSAT P ++ LA+ +L N
Sbjct: 477 DMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNP 536
Query: 144 VFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLLN 251
V + +G G T++ I+Q V+ + E +K L LL+
Sbjct: 537 VVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLD 572
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 72.5 bits (170), Expect = 1e-11
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+D IL+FV KK A ++E L ++ Y V IHGD +Q R AL F++G+ P+LVAT
Sbjct: 416 KDDKILIFVLYKKEAARVEGTL-ARKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATD 474
Query: 464 VAARGLDIPHVRHVIILIYHLT 529
VAARGLDIP V+ VI + + LT
Sbjct: 475 VAARGLDIPKVQLVINVTFPLT 496
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N P +E+YVHRIGRTGR G A +FF ++ A +LV +L +AKQD+P L
Sbjct: 490 NVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIPEGL 546
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKT--GERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-S 173
D GFE IR I+ HT T G RQT+ FSAT+P+ ++ LA FL + V + +G +
Sbjct: 323 DTGFEQDIRNIIS-HTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELA 381
Query: 174 TSENITQKVVWVDEMDKRSFLLDLL 248
S+NITQ V +D+ + +LD L
Sbjct: 382 ASQNITQIVEILDDPRSKERMLDNL 406
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 233 FIGFTKCTNLLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRERE 409
F +K LLQ+ EE +VFV+TK+ AD +E L + S+HGD+ Q R
Sbjct: 226 FYTSSKPVELLQQMLKEEKIYSAIVFVKTKRDADNVENLLSKMKLKIDSLHGDKTQASRS 285
Query: 410 DALRRFRTGQTPILVATAVAARGLDIPHVRHVIIL 514
LR F+ G+ ILVAT VA+RG+DI + HV L
Sbjct: 286 RILRSFKEGKIQILVATDVASRGIDIDDISHVFNL 320
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N ++P D E Y HR+GRTGR +G A SFF+ + L L ++ E K ++P
Sbjct: 319 NLNIPEDPEIYTHRVGRTGRASKVGKAISFFSKRDFFL---LAKVEKEIKMEIP 369
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF +++I++ E+Q ++FSAT PK I L +DF+ + + +
Sbjct: 163 DMGFIDDVKEILK----RTKEEKQVMLFSATMPKAIMNLVEDFMGKFELIQTESFAKPLQ 218
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHV 278
NI + L +L + Y+ V
Sbjct: 219 NIEHLAYFYTSSKPVELLQQMLKEEKIYSAIV 250
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFI-GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q F+ I GF K L + EE +++FV+TK ++ + L + GY V +I+GD Q
Sbjct: 225 QKFIVIKGFRKIDALDRLLETEETDGVIIFVKTKTSTIEVTDNLKALGYKVAAINGDMQQ 284
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+RE + +FR+ ++ ILVAT V ARG+D+ + HVI
Sbjct: 285 SQREYIVDQFRSAKSDILVATDVVARGIDLERISHVI 321
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N+D+P+D + YVHRIGRTGR G G + S
Sbjct: 322 NYDMPNDTDTYVHRIGRTGRAGREGTSIS 350
Score = 34.3 bits (75), Expect = 3.2
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF + K V H + E Q L+FSAT P I + +++L N + V T+
Sbjct: 167 MGFIDDV-KFVLSHV---SDECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANT 222
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQ 257
+TQK + + K L LL +
Sbjct: 223 VTQKFIVIKGFRKIDALDRLLETE 246
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K + LL D ++FV TK GA L E L G+ ++HGD QR RE +++RF
Sbjct: 226 KFSALLSYIDENRDMKRIIFVRTKHGAVVLSEILNKCGFKNVTLHGDMRQRSREISIKRF 285
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
R ++ I++AT VAARG+DIP V +I
Sbjct: 286 RNYRSGIMIATNVAARGIDIPDVDEII 312
Score = 40.3 bits (90), Expect = 0.049
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 508 NFDLP-SDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD 663
NFD P D++ Y HR GR+GR G G A + F + + + + +E+ K D
Sbjct: 313 NFDAPIDDIKSYSHRAGRSGRFGRPGHALTIFTEKQKNMINE-IEMKNNVKMD 364
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K +L + E+ L ++F TKKG +L E L ++GY +HGD Q +R+ +R+F
Sbjct: 230 KLDSLCRIIDSEQIDLGILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKF 289
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
R L+AT VAARG+D+ +V HVI
Sbjct: 290 RDSSIEFLIATDVAARGIDVGNVSHVI 316
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P D E YVHRIGRTGR G G+A + T R + + L + E K +P+ T
Sbjct: 317 NYDIPQDPESYVHRIGRTGRAGRKGLALTLV--TPREM-KHLRSIEQEIKMSIPSQEVPT 373
Query: 688 AAD 696
D
Sbjct: 374 IED 376
Score = 38.7 bits (86), Expect = 0.15
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I+ ERQTL+FSAT P I+ L++ ++ + +++ R T+
Sbjct: 161 DMGFIDDIESILR----QVKNERQTLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAP 216
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+I Q V E +K L +++++
Sbjct: 217 SIDQFYYKVLERNKLDSLCRIIDSE 241
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/87 (41%), Positives = 48/87 (55%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
+K L R E+D ++F K QL L QG+ V IHGD +Q ER L R
Sbjct: 228 SKKKKLCDMLRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELER 287
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHV 505
F+ GQ +LVA+ +AARGLD+ + HV
Sbjct: 288 FKNGQISVLVASDIAARGLDVKGISHV 314
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I I C +P + RQTL+FSAT P I+ LA FL N + + R + +
Sbjct: 160 DMGFIPDIETI--CTKLPTS--RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANT 215
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q+++ V K+ L D+L A+
Sbjct: 216 LIDQRLIEVSPRSKKKKLCDMLRAE 240
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
NFD+P+ ++Y+HRIGRTGR G G A +F
Sbjct: 316 NFDVPTHPDDYIHRIGRTGRGGASGEALTF 345
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFV+T+ G D L L GY V +IHGD+ Q R AL RF+TG+ +LVAT VAARG
Sbjct: 248 LVFVKTRNGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLVATDVAARG 307
Query: 479 LDIPHVRHVI 508
LDI + VI
Sbjct: 308 LDIDDLPLVI 317
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF ++ + +P +RQTL+FSATF I+ +A L V ++V +T+
Sbjct: 162 DLGFARELNAVFAA--LP--AQRQTLLFSATFSDDIRAMAATILRGPVNISVSPPNATAS 217
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q VV VD+ +K + L+
Sbjct: 218 KIKQWVVTVDKRNKPDLFMHLV 239
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N DLP ++YVHRIGRTGR G GVA S
Sbjct: 318 NVDLPIVAQDYVHRIGRTGRAGASGVAVS 346
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFV TKK D+L +YL +G +IHG+++QRER L F G +LVAT VAARG
Sbjct: 250 LVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDVAARG 309
Query: 479 LDIPHVRHVI 508
LDI + +V+
Sbjct: 310 LDIESLPYVV 319
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N+DLP+ E YVHRIGRTGR G G A S R + + +L+
Sbjct: 320 NYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAEREFLQRIEKLI 365
Score = 44.0 bits (99), Expect = 0.004
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF I+KI++ +RQTL+F+AT + +++LA+ +L N + V ST++
Sbjct: 164 DLGFIDPIQKIMDY----AADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAK 219
Query: 183 NITQKVVWVDEMDKRSFLLDLLN----AQTCYNVHVPKRIN---LYLC 305
I Q VD K L L+ QT V KR++ YLC
Sbjct: 220 QIRQFAYQVDYGQKADILSYLITEGKWGQTLVFVRTKKRVDELTQYLC 267
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
+L G K LL+ E ++VFV TK+ +++ +Y+ S G +++GD Q +R
Sbjct: 225 WLVKGVDKNQALLRICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQR 284
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
E A+ R + GQ +LVAT VAARGLD+ + HV+
Sbjct: 285 ERAVDRLKKGQVDMLVATDVAARGLDVERISHVV 318
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
N+D+P D E YVHRIGRTGR G G A F R
Sbjct: 319 NYDIPYDAESYVHRIGRTGRAGRSGEAILFVRPRER 354
Score = 39.5 bits (88), Expect = 0.085
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 66 ERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLL 239
+RQ +FSAT PKQI+ +A+ L + + +T+E+I QK V +DK LL
Sbjct: 180 KRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQALL 237
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +2
Query: 236 IGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDA 415
+G T+ L + +VF TK+ AD+L L +G ++HGD Q +RE A
Sbjct: 228 VGRTRTRVLADLLTVYNPEKAIVFTRTKREADELANELIHRGIESEALHGDLAQSQRERA 287
Query: 416 LRRFRTGQTPILVATAVAARGLDIPHVRHVIILIYHL 526
L FR+G+ +LVAT VAARGLDIP V +++ YHL
Sbjct: 288 LGAFRSGRVGVLVATDVAARGLDIPEVD--LVVQYHL 322
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
+ LP D E YVHR GRTGR G G A + D R+L
Sbjct: 320 YHLPQDPESYVHRSGRTGRAGRTGTAIVMYGDRENRELRNL 360
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
T+ LL + D ++FVETK+ DQ+ + G+ IHGD+ Q++R+ L
Sbjct: 334 TRLFKLLTELSQQGDSKSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNT 393
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR ++ ILVAT VA+RGLD+ V++VI
Sbjct: 394 FRRLRSGILVATDVASRGLDVDDVKYVI 421
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRKI+ P +RQ LM+SAT+PK+I+ LA++FL Y+ + +G + + +
Sbjct: 262 DMGFEPQIRKIIS-QIRP---DRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAAN 317
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
ENI Q + +E +K + L LL
Sbjct: 318 ENIMQIIECCEEYEKETRLFKLL 340
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
NFD P++ E+Y+HRIGRTGR N G + +FF N A DL+ +L EA Q V
Sbjct: 422 NFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAKAGDLIGVLREANQFV 474
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VFV K AD L L V S+HGDR QR+RE AL F+TG+ IL+AT +A+R
Sbjct: 490 VIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASR 549
Query: 476 GLDIPHVRHV 505
GLD+ V HV
Sbjct: 550 GLDVHDVTHV 559
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFD P ++EEYVHRIGRTGR G GV+ + + +A +L+ +L A Q +P L S
Sbjct: 561 NFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSM 620
Query: 688 A 690
A
Sbjct: 621 A 621
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTS- 179
DMGFEPQI KI+ + +RQT+M SAT+P + LAQ +L + + VG + +
Sbjct: 403 DMGFEPQIMKIL----LDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAV 458
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNAQT 260
++ Q ++ E +K S + L + +
Sbjct: 459 SSVKQNIIVTTEEEKWSHMQTFLQSMS 485
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F KK D+L +L +QG+ V+ +HGD Q++RE +R F+ G I VAT VAARG
Sbjct: 240 IIFCRMKKEVDRLVAHLTAQGFKVSGLHGDMEQKQREVTIRAFKQGGIDIFVATDVAARG 299
Query: 479 LDIPHVRHVIILIYHLTWKNTS 544
LD+ V HV YH+ + + S
Sbjct: 300 LDVNDVTHV--FNYHIPFDSES 319
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF +I+ I +PK ERQTLMFSAT P I+ LA+ L N +++ + ST+
Sbjct: 154 DMGFLDEIKNIFTF--LPK--ERQTLMFSATMPNGIRKLAEQILNNPKTVSITKSESTNS 209
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
ITQ V E ++ L+ L++
Sbjct: 210 KITQYYYVVQERERDDALVRLID 232
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N+ +P D E YVHRIGRTGR G G A
Sbjct: 310 NYHIPFDSESYVHRIGRTGRAGKTGEA 336
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
LL+ + E + +L+F TK GA+ L + + G+ S+ G+ +Q R + FR G
Sbjct: 230 LLEILKTVETKSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRRGN 289
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
ILVAT +AARGLDI H+ HVI
Sbjct: 290 FKILVATDIAARGLDIDHISHVI 312
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF+P I+ I++C P QTL+FSAT P +++ L + N V + VG S
Sbjct: 158 DMGFQPDIQSILKCLVQP----HQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVS- 212
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+++ V V K LL++L
Sbjct: 213 SVSHSVYPVKSHQKTPLLLEIL 234
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N+D+P E+Y HRIGRTGR G A S + + RD+ LL
Sbjct: 313 NYDMPDSPEDYTHRIGRTGRFDRTGQAFSLVTGRDGDMVRDIQRLL 358
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F +TK+ A ++ E L +G+ +IHGD Q RE ALR FR + +LVAT VAARG
Sbjct: 292 IIFTKTKRTAAKVAEELVDRGFAAAAIHGDLGQGAREQALRAFRNNKVDVLVATDVAARG 351
Query: 479 LDIPHVRHVI 508
+D+ V HVI
Sbjct: 352 IDVDDVTHVI 361
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+ D + Y+HR+GRTGR GN G A +F
Sbjct: 362 NYQCVEDEKIYLHRVGRTGRAGNKGTAVTF 391
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVG---RVGS 173
D+GF P + ++ RQTL+FSAT P + +A+ ++ + G
Sbjct: 203 DLGFLPDVETLIA----GTPAVRQTLLFSATMPGPVIAMARRYMTQPTHIRAADPDDEGL 258
Query: 174 TSENITQKVVWVDEMDKRSFLLDLLNAQ 257
T +I Q + MDK + +L A+
Sbjct: 259 TKRDIRQLIYRAHSMDKIEVVARILQAR 286
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
NFD+P D+E YVHRIGRTGR G G+AT+F N + + DL +LL EA Q++P +L
Sbjct: 515 NFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKM 574
Query: 685 TAAD 696
A D
Sbjct: 575 LAGD 578
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
LQ+ P+ +L+F E K D + EYL +G V SIHG ++Q +R + FR +
Sbjct: 437 LQKTSPK----VLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEK 492
Query: 443 PILVATAVAARGLDIPHVRHVI 508
+LVAT VA++GLD + HVI
Sbjct: 493 DVLVATDVASKGLDFQGIEHVI 514
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +I+ I +RQTL+FSAT P++IQ A+ L + + VGR G+ S
Sbjct: 360 DMGFEDEIKSIFYFFK----AQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASL 415
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+ Q++ +V +K +L+ L
Sbjct: 416 NVLQELEFVRSENKLVRVLECL 437
>UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 917
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+DLPS+ E+Y+HRIGRTGR+G G+A ++FN +N+ + L++ L + Q VPNWL
Sbjct: 856 NYDLPSEFEQYMHRIGRTGRIGKGGMAINYFNSSNKNIIDKLIDHLRKYDQPVPNWL 912
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++FVE + + + +L ++GY V +HG +Q R+ FR IL+AT++AARG
Sbjct: 786 IIFVELRHSINNVFNFLKTKGYNVDYLHGKMSQIRRQSVFENFRKKSVQILIATSIAARG 845
Query: 479 LDIPHVRHVI 508
LD P + VI
Sbjct: 846 LDFPDLELVI 855
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P ++EEYVHR+GRTGR G G + SFF + +A++L+E+L EA+Q+VP+ L +
Sbjct: 603 NYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNM 662
Query: 688 A 690
A
Sbjct: 663 A 663
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I++F K AD L L G+ IHG+R+Q +RE A+ ++G ILVAT VA+R
Sbjct: 532 IIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASR 591
Query: 476 GLDIPHVRHVI 508
GLDI + HVI
Sbjct: 592 GLDIEDITHVI 602
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRK++ + +RQT+M SAT+P ++ LAQ ++ N + + VG + +
Sbjct: 444 DMGFEPQIRKVM----LDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAAT 499
Query: 183 NITQKVVWV--DEMDK 224
+ ++++ + D+MDK
Sbjct: 500 HSVKQIIKLMEDDMDK 515
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +2
Query: 233 FIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRERED 412
F+ +K T L+ + I++FV KK D + +++ GY S+HG + Q RED
Sbjct: 590 FVQESKKTRHLEETLETLEPPIIIFVNLKKNTDVITKHITKIGYRAVSLHGGKTQESRED 649
Query: 413 ALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
AL +F++G ILVAT V RGLD+ ++ VI
Sbjct: 650 ALNKFKSGAYDILVATDVVGRGLDVEGIKVVI 681
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D+P D++ Y HRIGRTGR G G++ SF D + L DL +LL+ VP
Sbjct: 682 NYDMPKDIQTYTHRIGRTGRAGLKGLSISFVTDADVDLFYDLKQLLISTDNIVP 735
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 69 RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
R T MFSAT P ++ L + +L F+++G VG +ITQ++ +V E K L + L
Sbjct: 545 RITHMFSATMPPAVEKLTKRYLRAPAFISIGDVGGGKTSITQQLDFVQESKKTRHLEETL 604
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/94 (37%), Positives = 54/94 (57%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
FL K L++ ++D ++F TKK D++ YL +G+ ++HGD Q +R
Sbjct: 222 FLVKEVDKAKLLVRLLDLKKDYSAILFANTKKDVDEITAYLQDKGFLADAVHGDLKQNQR 281
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ + FR G+ IL+AT VAARGLDI ++ VI
Sbjct: 282 QYVMNNFRKGKIKILIATDVAARGLDISDIKMVI 315
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN 603
N+DLP + E YVHRIGRTGR G G+A S +
Sbjct: 316 NYDLPHEDEVYVHRIGRTGRAGKKGLAYSLIS 347
Score = 39.5 bits (88), Expect = 0.085
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF+ + I++ +P+ ERQT++FSAT P I+ +A + + L V
Sbjct: 161 MGFQEALETILK--KIPE--ERQTVLFSATLPPFIKKIASKYQKDTKILQVPVKNIAVNA 216
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQTCYN 269
I Q V E+DK L+ LL+ + Y+
Sbjct: 217 IEQNYFLVKEVDKAKLLVRLLDLKKDYS 244
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F TK+ +L + L +G+ +IHGD Q RE AL++FR G ILVAT VAAR
Sbjct: 306 VIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAAR 365
Query: 476 GLDIPHVRHVI 508
G+D+ V HVI
Sbjct: 366 GIDVTGVSHVI 376
Score = 39.5 bits (88), Expect = 0.085
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N + P D + YVHRIGRTGR G GVA +
Sbjct: 377 NHECPEDEKTYVHRIGRTGRAGAKGVAVT 405
Score = 33.1 bits (72), Expect = 7.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFL-AVGRVGSTS 179
D+GF P + ++ RQT++FSAT P I LA+ L+ V + A G +
Sbjct: 219 DLGFLPDVENLIG----RTPASRQTMLFSATMPAPIMALARSQLHRPVHVRAEGADTQAT 274
Query: 180 ENITQKVVW-VDEMDKRSFLLDLLNA 254
TQ+ V+ +DK + +L A
Sbjct: 275 VPDTQQFVYQAHPLDKIEIIGRILQA 300
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVF TK GA++L EYL G +IHG+++Q R AL F+ +LVAT +AAR
Sbjct: 252 VLVFTRTKHGANRLAEYLEKHGLTAAAIHGNKSQNARTKALADFKANTVRVLVATDIAAR 311
Query: 476 GLDIPHVRHVI 508
GLDI + HV+
Sbjct: 312 GLDIDQLPHVV 322
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF ++K++ +P +RQ L+FSATF K I LA L+N + V +T E
Sbjct: 167 DMGFIHDVKKVLA--RLP--AKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVE 222
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q+V + KR+ L L+
Sbjct: 223 RIEQRVYRLPASHKRALLAHLI 244
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPN 672
NF+LP+ E+YVHRIGRTGR G G A S L + + + KQ +P+
Sbjct: 323 NFELPNVEEDYVHRIGRTGRAGRSGEAISMVAPDEEKLLKSIERV---TKQKIPD 374
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+ED+ ILVF TK+ + LE +LY G +HG Q R+ +LR R G+ +LVAT
Sbjct: 398 DEDESILVFCNTKRMVELLEFHLYKSGLKCGRLHGGMGQTNRDRSLRLLRDGRINVLVAT 457
Query: 461 AVAARGLDIPHVRHVI 508
+VAARGLDIP + V+
Sbjct: 458 SVAARGLDIPAIGAVV 473
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA-TSFFNDT---NRGLARDLVELLVEAKQDVPNW 675
N LP+++++Y+HR+GRTGR G G+A T F+D+ R L D+ ++ + QD P
Sbjct: 474 NVGLPTNLDDYIHRVGRTGRFGQCGLALTCVFSDSIHGQRELIHDIRQVAGKYAQDFPTE 533
Query: 676 LTS 684
LT+
Sbjct: 534 LTA 536
Score = 40.7 bits (91), Expect = 0.037
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Frame = +3
Query: 3 DMGFEPQIRKIVEC--HTMPK-TGE---RQTLMFSATFPKQIQLLAQDFL 134
DMGFE QIRKI+ + MP+ +G+ RQT++FSATFP + + + FL
Sbjct: 278 DMGFEHQIRKILSNPDYGMPQPSGDGLPRQTVLFSATFPPSVLQIGRSFL 327
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 RNGQAFLFIGFT-KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGD 388
R Q L + F+ K L + + E LVF TK GAD++ + L G ++IHG+
Sbjct: 233 RINQRILQVDFSAKPAFLTKLLKDEPINRALVFTRTKHGADKVVKTLEKAGIAASAIHGN 292
Query: 389 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
++Q RE L +FR+G LVAT +AARG+D+ + HVI
Sbjct: 293 KSQNHRERTLAQFRSGDIRTLVATDIAARGIDVDGITHVI 332
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF IRKIV +P +RQTL FSAT PK I LA L + +AV V ST+E
Sbjct: 177 DMGFINDIRKIVA--KLPI--KRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAE 232
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q+++ VD K +FL LL
Sbjct: 233 RINQRILQVDFSAKPAFLTKLL 254
Score = 40.7 bits (91), Expect = 0.037
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NFDLP+ E YVHRIGRT R G G A S
Sbjct: 333 NFDLPNVPETYVHRIGRTARAGAEGTAIS 361
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+ED +VF TK+ + + L + GY ++HGD +Q +R+ A++RFR +L+AT
Sbjct: 251 DEDMFGVVFCRTKRDTQNVADQLNNNGYATEALHGDMSQAQRDAAMKRFRNKNLKLLIAT 310
Query: 461 AVAARGLDIPHVRHVI 508
VAARG+D+ + HVI
Sbjct: 311 DVAARGIDVDDITHVI 326
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NDTNRGLARDLVELLVEAKQ-DVP 669
+F LP D E Y HR GRT R G GV+ + NR L +L +E Q +VP
Sbjct: 327 HFALPDDPEFYTHRSGRTARAGKKGVSIALITRGDNRKLKFIASKLGIEFTQGEVP 382
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 70.5 bits (165), Expect = 4e-11
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVT-SIHGDRNQREREDAL 418
F +C +L++ + + I+ F TK+ D L+ L G+ SIHGD++Q ERE L
Sbjct: 338 FDRCVAILKKELGKNETCIM-FAGTKRRCDFLDRRLKQVGFSSAGSIHGDKDQYEREMVL 396
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVIILIYHL 526
FR G+ ILVAT VAARGLDIP V VI+ + L
Sbjct: 397 DNFRRGRGNILVATDVAARGLDIPGVAAVIVYDFPL 432
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
+D P VE+YVHRIGRTGR G G A +FF NRG A +L+E+L A Q VP
Sbjct: 428 YDFPLQVEDYVHRIGRTGRAGKDGKAFTFFTKDNRGAANELIEILQGAGQTVP 480
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG---S 173
DMGFEPQI+KI + P RQT+MF+AT+PK +Q +A F + + +G G +
Sbjct: 265 DMGFEPQIKKIFKL--CPSA--RQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGDKLT 320
Query: 174 TSENITQKVVWVDEMDK 224
+++ITQ V V+E +K
Sbjct: 321 ANKSITQTVEVVEEEEK 337
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F TKKG DQL++ L +G ++HGD+ Q ER+ + FR G++ L+AT VA+R
Sbjct: 397 ILIFCSTKKGCDQLQKTLDREGIRCLALHGDKKQTERDYVMSHFRNGRSTALIATDVASR 456
Query: 476 GLDIPHVRHVI 508
GLDI + V+
Sbjct: 457 GLDIKDIEVVV 467
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NDTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P +E+YVHRIGRTGR G +G + SFF +D + +A+DLVE+L E++ D+P L S
Sbjct: 468 NYDMPKVIEDYVHRIGRTGRAGAIGQSISFFASDEDVRMAKDLVEILRESQNDIPYELRS 527
Score = 62.9 bits (146), Expect = 8e-09
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFEPQIRKIV+ P +RQT++FSAT+PK++Q LA DF V + +G V TS
Sbjct: 292 DMGFEPQIRKIVD-QIRP---QRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTS 347
Query: 180 ENITQKVVWV-DEMDKRSFLLDLLNAQTCYNVHVPKRINLYLCLWK 314
+ +++V+V +DK ++ N++ I+L L L K
Sbjct: 348 NRMIKQIVYVMKAIDKNQRYNQTIDGA---NIYTRSSISLLLYLLK 390
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTN-RGLARDLVELLVEAKQDVPNWLTS 684
N+D+P DVE YVHRIGRTGR G+ G AT+F N N + DL LL EAKQ +P +L
Sbjct: 478 NYDMPDDVENYVHRIGRTGRSGHTGTATTFINKANDESVLLDLKHLLREAKQKIPPFLLE 537
Query: 685 TAAD 696
++
Sbjct: 538 LCSE 541
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +R I G+RQTL+FSAT PK+IQ A+ L V + VGR G+ S
Sbjct: 349 DMGFEEDVRTIFSFFE----GQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASM 404
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+ Q+V +V + K +LL+ L
Sbjct: 405 NVIQEVEYVKQEAKIVYLLECL 426
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/90 (38%), Positives = 48/90 (53%)
Frame = +2
Query: 239 GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
G TK T L + Q L+FV T++ + E L G+ + GD NQ +RE +
Sbjct: 231 GMTKMTALTRLLEVTPYQRALIFVRTRQDTMDVAELLQRNGFKAAPLSGDLNQAQREQTV 290
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ R+G ILV T V ARGLD+P + HVI
Sbjct: 291 SQLRSGHIEILVGTDVVARGLDVPEITHVI 320
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLAR 627
N+DLPSD E YVHRIGRTGR G G A FF R L R
Sbjct: 321 NYDLPSDTESYVHRIGRTGRAGRTGEAILFFRAKERHLLR 360
Score = 37.9 bits (84), Expect = 0.26
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I++ +P T +R +FSAT P I+ LA+ FL + + + + +
Sbjct: 165 NMGFIEDIETILKA--VPNTAQRA--LFSATMPNAIRKLAKTFLKDPLNIQIEAIAREKA 220
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I QK V M K + L LL
Sbjct: 221 TIKQKAWKVQGMTKMTALTRLL 242
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK+ +++ + L G+ ++HGD Q +R AL+R R G+T +LVAT VAARG
Sbjct: 249 IVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAARG 308
Query: 479 LDIPHVRHVI 508
+D+ + HVI
Sbjct: 309 IDVASISHVI 318
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
NFDLP E+YVHRIGRTGR G G+A SF GL +++
Sbjct: 319 NFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVKNI 360
Score = 41.5 bits (93), Expect = 0.021
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+ I P ERQTL+FSAT + LA++ + + + V
Sbjct: 162 DMGFVDDIKAIAA--RCP--AERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEA 217
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q++++ D MD ++ LLD L
Sbjct: 218 KIEQRLLFADNMDHKNRLLDAL 239
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF K AD++ Y Y V IHGD Q+ERE+ L+ F+ G+T IL+ T VA RG
Sbjct: 473 IVFTNFKSEADRIFRYFDDMRYRVAVIHGDMTQKERENNLKYFKAGRTNILIGTDVAQRG 532
Query: 479 LDIPHVRHVI 508
LDIP+VR V+
Sbjct: 533 LDIPNVRLVL 542
Score = 63.3 bits (147), Expect = 6e-09
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 16/101 (15%)
Frame = +3
Query: 3 DMGFEPQIRKIVE-----CHTMPKTG--------ERQTLMFSATFPKQIQLLAQDFLY-- 137
DMGFEPQIR I+ H++ ERQTL+FSATFPK+I+ LA +FL
Sbjct: 308 DMGFEPQIRDILHELPPIHHSVQDPSNPDITHQIERQTLLFSATFPKEIKNLAMEFLRQD 367
Query: 138 NYVFLAVGRVGSTSENITQKVVWVDEM-DKRSFLLDLLNAQ 257
V + VG++GS++ N+ Q+VV V+ DK L + + Q
Sbjct: 368 RLVSITVGQIGSSNPNLAQRVVLVERSNDKLRLLTEYITGQ 408
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF--NDTNRGLARDLVELLVEAKQDVPNWLT 681
N+DLP +V++Y HRIGRTGR G G+A +F + N G +D+ +++ KQ +P+W
Sbjct: 543 NYDLPGNVDDYTHRIGRTGRAGRPGLAVTFVCPDRDNVGALKDIRRKMMDTKQPIPDWFN 602
Query: 682 ST 687
T
Sbjct: 603 RT 604
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +2
Query: 272 ARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPIL 451
A P + L+FVE ++ AD L + L GYP SIHG + Q +R+ A+ F++G +L
Sbjct: 659 ATPIPNPKCLIFVERQESADSLLKELIQSGYPCLSIHGGKEQADRDQAISDFKSGLVSVL 718
Query: 452 VATAVAARGLDI 487
+AT+VAARGLD+
Sbjct: 719 IATSVAARGLDV 730
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D P+ +E+YVHR+GRTGR G G A +F LA ++
Sbjct: 738 NWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQERLAAEI 779
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-------YNYVFLAVG 161
DMGFEPQ+ K+ T +RQT++FSATFPK+++ LA+ L + + VG
Sbjct: 550 DMGFEPQVLKL----TQSIRPDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGPIEIIVG 605
Query: 162 RVGSTSENITQKV-VWVDEMDKRSFLLDLL 248
+ ITQ V V+ +E K LL++L
Sbjct: 606 ARSVVASEITQFVEVFQNEKSKFPRLLEVL 635
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
E+ IL+F +TK+ D L + L Y SIHGD+ QRER+ L ++T + ILVAT
Sbjct: 373 ENNKILIFCDTKRNCDNLGKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATD 432
Query: 464 VAARGLDIPHVRHVI 508
VA+RGLDI ++ VI
Sbjct: 433 VASRGLDIKNISVVI 447
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-----DTNRGLARDLVELLVEAKQDVPN 672
N+D+P+ +E+Y+HRIGRTGR G G + FF+ A++L++LL + Q VP
Sbjct: 448 NYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDYYMPQKLKFAKELIKLLNKTNQTVPP 507
Query: 673 WLTSTA 690
L A
Sbjct: 508 QLKEIA 513
Score = 49.6 bits (113), Expect = 8e-05
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDF-LYNYVFLAVGRVGST- 176
DMGFE Q+RKI+ +Q L +AT+P+Q++ LA DF Y+ V + +G+ T
Sbjct: 289 DMGFEKQLRKIM----TQVNKNKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGKNELTA 344
Query: 177 SENITQKVVWVDEMDKRSFLLDLL 248
++NI Q V+ +D + LLD L
Sbjct: 345 NKNIEQNVIISSSIDMKKKLLDWL 368
>UniRef50_A5KDY2 Cluster: RNA helicase, putative; n=1; Plasmodium
vivax|Rep: RNA helicase, putative - Plasmodium vivax
Length = 1081
Score = 69.7 bits (163), Expect = 7e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP++ E+Y+HRIGRTGR+G G+A ++FN +NR + L++ L + Q VP WL
Sbjct: 1021 NYDLPAEFEQYMHRIGRTGRIGKTGLAINYFNSSNRKIIDKLIDHLKKHDQTVPQWL 1077
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +2
Query: 380 HGDR-NQREREDAL-RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+G+R N R R A+ ++FR + IL+AT++AARGLD P + VI
Sbjct: 976 NGERLNARARRQAVFQQFRDKEFQILIATSIAARGLDFPDLELVI 1020
Score = 33.5 bits (73), Expect = 5.6
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYN-YVFLAVGRVGSTSE 182
+G + Q+ I+ + RQT++F+ATF + ++ + F+ YVFL + +
Sbjct: 804 LGLKEQMDAILFEKDLCANDARQTILFTATFSESLREDIEKFMATPYVFLNITQKREVRN 863
Query: 183 NITQKVVWVDEMDKRSFLL-DL--LNAQTCYNVHVPKRINLYLCLWKLRKVRIN 335
+I Q V +V K+ LL DL L Q V + IN K +N
Sbjct: 864 SIRQIVKYVPAKCKQDELLKDLTTLQGQAIIFVELRSSINYIFSALKSNGYDVN 917
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E+D L+FV+ ++ AD L + L +GY S+HG ++Q +R++ + F+ G PI+ AT
Sbjct: 725 EKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTAT 784
Query: 461 AVAARGLDIPHVRHVI 508
+VAARGLD+ ++ VI
Sbjct: 785 SVAARGLDVKQLKLVI 800
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P+ +E+YVHR GRTGR G G +F ARD++ L + VP L +
Sbjct: 801 NYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPELEAM 860
Query: 688 AA 693
AA
Sbjct: 861 AA 862
Score = 50.8 bits (116), Expect = 3e-05
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNY-VFLAVGRVGSTS 179
DMGFEPQ+ KI+ + P +RQT++FSATFPKQ++ LA+ L N + + VG +
Sbjct: 640 DMGFEPQVMKILN-NIRP---DRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVA 695
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
I Q V E K LL++L
Sbjct: 696 AEIEQIVEVRSEDTKFHRLLEIL 718
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK A L E+L GY TS G+ +Q R+ AL +FR G+ LVAT VAARG
Sbjct: 257 IIFTRTKHRAQCLAEHLRDLGYKATSFQGNLSQSRRKTALGKFRQGELKFLVATDVAARG 316
Query: 479 LDIPHVRHVI 508
+DI H+ HVI
Sbjct: 317 IDIDHLSHVI 326
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFD+P+ EY HRIGRTGR LG+A S +R
Sbjct: 327 NFDMPNTAIEYTHRIGRTGRADKLGMAFSLITKNDR 362
Score = 33.9 bits (74), Expect = 4.2
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D GF I I++ H P+ RQ L+FSAT I+LL L+ V + +G +
Sbjct: 172 DHGFRDAIYHILK-HLPPR---RQNLLFSATMSADIRLLIDKVLHRPVRIQIGE-PKPAV 226
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYN 269
ITQ + V E K + L +L + ++
Sbjct: 227 TITQTLFPVSETLKVNLLETILQNHSIHS 255
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+TK L E+ + L+FV T++ A +L L + G+ V HGD +Q+ RE L
Sbjct: 227 WTKARALQPILEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLT 286
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
RFR+ Q +VAT +AARGLD+ + HVI
Sbjct: 287 RFRSRQVRWVVATDIAARGLDVDQLSHVI 315
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
N+DLP VE YVHRIGRTGR G G A + R
Sbjct: 316 NYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFER 351
Score = 36.7 bits (81), Expect = 0.60
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF + KI+ P+ +RQT +FSAT P I++L FL + V + V + +T
Sbjct: 160 MGFIDDVEKILS--QAPQ--DRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNK 215
Query: 186 ITQ 194
I Q
Sbjct: 216 INQ 218
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 69.3 bits (162), Expect = 9e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF +TK AD + + L + Y V ++HGD Q +RE L RFRT + ILVAT VAARG
Sbjct: 289 LVFCQTKADADTVAKSLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARG 348
Query: 479 LDIPHVRHVI 508
+DI + HV+
Sbjct: 349 IDIEGITHVV 358
Score = 42.3 bits (95), Expect = 0.012
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+ +P D Y HR+GRTGR G+ G+A SF
Sbjct: 359 NYSIPHDSATYTHRVGRTGRAGSQGIAISF 388
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 69.3 bits (162), Expect = 9e-11
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF TK G+D+L ++L +Q +IHG+++Q +R+ AL F+ G+T IL+AT +AAR
Sbjct: 349 VIVFSRTKHGSDKLVKWLGTQNIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAAR 408
Query: 476 GLDIPHVRHVI 508
G+DIP + VI
Sbjct: 409 GIDIPGIEIVI 419
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/84 (30%), Positives = 49/84 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF P +++I+ +RQTL+FSAT K+I+ L + +L + V ++V ST +
Sbjct: 264 DIGFLPAVKRIIS----KVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVD 319
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
I Q ++ + + +K L +++A
Sbjct: 320 KIEQSLMHLSKQNKGLALQRIISA 343
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
NFDLP+ E YVHRIGRT R G G A +F D+ +++ K D+P
Sbjct: 420 NFDLPNVPESYVHRIGRTARAGADGKAIAFCAPDEHKQLWDIEKVI---KMDIP 470
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/94 (36%), Positives = 55/94 (58%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
+L G K L + E +++F TK G ++L L ++G+ +I+GD Q++R
Sbjct: 226 WLVSGMQKLDALTRILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQR 285
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
E +++ + G+ ILVAT VAARGLD+ + HVI
Sbjct: 286 ERTIQQLKDGKIDILVATDVAARGLDVERISHVI 319
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLAR 627
N+D+P D E Y HRIGRTGR G G A F R L +
Sbjct: 320 NYDVPHDPESYTHRIGRTGRAGRSGEAILFIAPRERNLLK 359
Score = 41.5 bits (93), Expect = 0.021
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGE-RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
MGF + I++ KT E RQT +FSAT P I+ +A +L + + V T++
Sbjct: 165 MGFIDDVETILQ-----KTPESRQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTAD 219
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
NI Q+ V M K L +L A+
Sbjct: 220 NIRQRYWLVSGMQKLDALTRILEAE 244
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++FV TK L E L ++G+ V + GD NQR+RE + + G+ I++AT VAARG
Sbjct: 267 IIFVRTKAETTMLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIATDVAARG 326
Query: 479 LDIPHVRHVI 508
LD+P + HVI
Sbjct: 327 LDVPRITHVI 336
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P D E Y+HR+GRTGR G G A R R L
Sbjct: 337 NYDVPYDTEAYIHRVGRTGRAGRTGKAILLVTPRERSWLRTL 378
Score = 32.7 bits (71), Expect = 9.7
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF + I+ P T +R +FSAT P QI+ +AQ +L N + + T E
Sbjct: 182 MGFIDDVEAILA--KTPDTCQRA--LFSATMPPQIKKVAQTYLKNATEVRIESETRTVER 237
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q V+ V K L +L +
Sbjct: 238 IAQFVLPVYAERKLDALTRILEVE 261
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF ETK+ AD+L + L G IHG+++Q R + +F++G+T +LVAT VAAR
Sbjct: 297 VIVFTETKRLADRLSKKLNQAGVKSGLIHGNKSQNFRNKTIEQFKSGETRVLVATDVAAR 356
Query: 476 GLDIPHVRHVI 508
G+D+ V HVI
Sbjct: 357 GIDVADVSHVI 367
Score = 44.0 bits (99), Expect = 0.004
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF ++K+V T QT++FSAT + L Q L N V + + ST+E
Sbjct: 211 DMGFVNDVKKLVGGMTQ----REQTMLFSATLEPNQKNLIQSLLKNPVEVKINTGVSTNE 266
Query: 183 NITQKVVWVDE-MDKRSFLLDL 245
NI Q ++ V E DK L DL
Sbjct: 267 NIEQGIIRVPEGKDKFGMLADL 288
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN 603
N+ LP ++ Y+HRIGRTGR G G A +F N
Sbjct: 368 NYQLPMTMDSYIHRIGRTGRAGKTGHAITFVN 399
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P ++EEYVHR+GRTGR G GV+ SFF + +A DL+++L EA Q+VP +
Sbjct: 643 NYDFPRNIEEYVHRVGRTGRAGRSGVSLSFFTRGDWAVASDLIKILEEADQEVPEEIRQM 702
Query: 688 A 690
A
Sbjct: 703 A 703
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F K AD L G TS+HGDR Q +RE AL ++G +L+AT VA+R
Sbjct: 572 VIIFCGRKTRADDLSSEFVLSGINCTSLHGDREQADREQALEDIKSGDVRVLIATDVASR 631
Query: 476 GLDIPHVRHVI 508
GLDI + HV+
Sbjct: 632 GLDIEDISHVV 642
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRK++ + +RQT+M SAT+P ++ LAQ ++ N V + VG + + +
Sbjct: 485 DMGFEPQIRKLL----LDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAAT 540
Query: 180 ENITQKVVWVDEMDK 224
+TQ++ +DE DK
Sbjct: 541 HTVTQQIEVIDEEDK 555
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
Q +LVF TK GA+ L E L G +IHG+++Q R AL F++G +LVAT +A
Sbjct: 246 QQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIA 305
Query: 470 ARGLDIPHVRHVI 508
ARGLDI + HV+
Sbjct: 306 ARGLDIEELPHVV 318
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF IR+++ +P +RQ L+FSATF I+ LA+ L+N + + V R + S+
Sbjct: 163 DMGFIHDIRRVLT--KLP--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD 218
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+TQ V +VD+ KR L ++
Sbjct: 219 QVTQHVHFVDKKRKRELLSHMI 240
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N++LP+ E+YVHRIGRTGR G A S L RD+ +LL K+++P
Sbjct: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLL---KKEIP 369
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIRKIV + +P RQTLM++AT+PK+++ +A D L N V + +GRV +
Sbjct: 595 DMGFEPQIRKIV--NEIPP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAA 650
Query: 183 N--ITQKVVWVDEMDKRSFLLDLLNAQ 257
N ITQ V V +M+K L +L +Q
Sbjct: 651 NKAITQYVEVVPQMEKERRLEQILRSQ 677
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D P+ VE+YVHRIGRTGR G GVA +FF + + A DL+++L A Q VP
Sbjct: 753 NYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E +++F TK+ D L + + + IHGD+ Q ER+ L +FR+G++ +L+AT
Sbjct: 678 ERGSKVIIFCSTKRLCDHLARSV-GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIAT 736
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLDI +R VI
Sbjct: 737 DVAARGLDIKDIRVVI 752
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF + K AD + E L S+G+ V S+HGD+ +ER+ L FR G+T +L+ T V ARG
Sbjct: 392 IVFCKRKVTADHIAERLISEGHAVASLHGDKLSQERDAILDGFRNGETKVLITTNVIARG 451
Query: 479 LDIPHVRHVI 508
+DIP V V+
Sbjct: 452 IDIPAVNMVV 461
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 526 DVEEYVHRIGRTGRMGNLGVATSFFND 606
D+E Y+HRIGRTGR G G + F +D
Sbjct: 476 DIETYIHRIGRTGRFGRKGCSVIFTHD 502
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F KK AD L L ++G+ ++HGD QR+R +A++ FR + ILVAT VA+RG
Sbjct: 286 IIFTRMKKEADALAIRLANRGFKAIALHGDMEQRDRREAIKAFRENKIEILVATDVASRG 345
Query: 479 LDIPHVRHVIILIYHL 526
LDI V HV YH+
Sbjct: 346 LDISDVSHV--FNYHI 359
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I +I + +P T RQTL+FSAT P+ I+ LA L F+ + T++
Sbjct: 200 DMGFLDDIEEIFKF--LPNT--RQTLLFSATMPEPIKALAMKILNEPAFVKITPTDVTNQ 255
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+I Q+ ++E ++ ++ L+ Q
Sbjct: 256 DIEQQYYIINEGERDEAIVRLIETQ 280
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N+ +P + E YVHRIGRTGR G GVA +
Sbjct: 356 NYHIPLNPESYVHRIGRTGRAGKKGVAVT 384
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VFV K+ A L E L ++G+ V ++HGD QR RE+ L++FR G +LVAT VA+R
Sbjct: 209 VIVFVNRKRDAKFLGEKLSTKGFRVGALHGDLPQRRREEILKKFRRGFINVLVATDVASR 268
Query: 476 GLDIPHVRHVI 508
GLDI V V+
Sbjct: 269 GLDISEVEAVV 279
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF TK A++L E+L QG IHG+R+Q R +AL F+ G+ +LVAT +AARG
Sbjct: 244 LVFTRTKHRANRLAEHLVRQGIKAERIHGNRSQGRRTEALAGFKAGKYRVLVATDIAARG 303
Query: 479 LDIPHVRHVI 508
+D+ + HV+
Sbjct: 304 IDVTELGHVV 313
Score = 52.8 bits (121), Expect = 9e-06
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P IR+I++ H +P RQTL FSAT P I +LA++ L N + + R+ + +
Sbjct: 158 DMGFLPDIRRILK-H-IP--ARRQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAA 213
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
ITQ V V + K + L+ LL
Sbjct: 214 GITQAVYPVAQELKAALLVALL 235
Score = 36.7 bits (81), Expect = 0.60
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRG 618
NFD+P ++Y+HR+GRT R G A +F + +G
Sbjct: 314 NFDVPLVPDDYIHRVGRTARAEATGDAFTFVSPQEQG 350
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
QL+L+F TK+ +++ + L + G+ S+HGD+ QR+R + + +FR G ILVAT VA
Sbjct: 241 QLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANILVATDVA 300
Query: 470 ARGLDIPHVRHVI 508
ARG+D+ V VI
Sbjct: 301 ARGIDVTGVDAVI 313
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P D+E YVHRIGRTGR G LG + + + RD+
Sbjct: 314 NYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYKLRDI 355
Score = 33.1 bits (72), Expect = 7.4
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ +P+ ERQT++FSAT I LA+ F N + + R T
Sbjct: 158 NMGFREDIELILT--RLPE--ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTIS 213
Query: 183 NITQKVVWVDEMDKRSF---LLDLLNAQ 257
+ Q V K ++DL N Q
Sbjct: 214 TVEQFYYLVKNSQKTEIVTQIIDLNNLQ 241
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +2
Query: 218 GQAFLFIGFTKCTNL-LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRN 394
GQ ++ T+L L R + I++F TK D+LE+ L GY V SIHGD+
Sbjct: 221 GQLLYYLPKKNKTDLCLHLLRNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKT 280
Query: 395 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
Q R A+ F++ + IL+AT VAARG+DI +V +I
Sbjct: 281 QGVRNKAIEDFKSKKASILIATDVAARGIDITNVDAII 318
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLA--RDLVELLVEAKQDVP 669
NFD+P+ E YVHRIGRTGR G G+A SF + D N +A +L+E ++ +D P
Sbjct: 319 NFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYIASIENLIEKSIKVIEDHP 375
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI + P+ ++QTL+FSAT P++I L++ + N + + +T++
Sbjct: 163 DMGFINDIKKIEKL--CPR--KKQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAK 218
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
NI Q + ++ + +K L LL
Sbjct: 219 NIGQLLYYLPKKNKTDLCLHLL 240
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I+VFVE ++ A Q+ L + P + G+ +Q ER++++ RFR G +LVATA+AAR
Sbjct: 471 IIVFVERRRTAQQVASALSMEEVPAVELQGELSQMERDESMHRFRYGDAFVLVATAIAAR 530
Query: 476 GLDIPHVRHVI 508
GLDI V HVI
Sbjct: 531 GLDIVGVDHVI 541
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRG---LARDLVELLVEAKQDVPNWL 678
N+DLPS + EYVHRIGRTGR+G+LG ATSFF+ + +A LVE +VP++L
Sbjct: 542 NYDLPSHIYEYVHRIGRTGRVGHLGRATSFFDSDSSNDSRIAPKLVEAFEATGVEVPDFL 601
Query: 679 TSTAAD 696
+A+
Sbjct: 602 KEASAN 607
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D GFE ++R+ +E +P RQ +M SATF +++ L L + + + VG VG
Sbjct: 374 DEGFEGEMREFLEHEDLPPRETRQVVMLSATFEDEVRDLGMSLLADPITVTVGVVGVPPG 433
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+I Q+++ V DK LL+LL
Sbjct: 434 SINQEIIAVPNGDKHDKLLELL 455
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF K+ D LE L GY ++HGD++Q R+ L FR+G+ PIL+AT VA R
Sbjct: 334 VIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGR 393
Query: 476 GLDIPHVRHVI 508
GLD+ V+ VI
Sbjct: 394 GLDVNDVKLVI 404
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTG-ERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-ST 176
DMGFEPQ+RKI+ PKT RQTLM+SAT+P++++ LA+ ++ Y+ + VG T
Sbjct: 248 DMGFEPQLRKII-----PKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKT 302
Query: 177 SENITQKVVWVDEMDKRSFLLDLLN 251
+ I Q V +K L+ +L+
Sbjct: 303 NSKIKQIVEVCSGREKEDKLIGVLD 327
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNL--GVATSFFNDTNRGLARDLVELLVEAKQDVPN 672
NFD P E+YVHRIGRT R GN G++ +FF ++ AR+L+ +L EA Q VP+
Sbjct: 405 NFDFPGSCEDYVHRIGRTAR-GNTKEGISHTFFTVGDKANARELIRMLREANQTVPS 460
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FV+TKK A L L +G ++HGD QR+RE AL F++G IL+AT VAAR
Sbjct: 243 MLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVAAR 302
Query: 476 GLDIPHVRHVI 508
GLDI V VI
Sbjct: 303 GLDIKDVGVVI 313
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N+++P D E Y+HRIGRTGR+G G A S
Sbjct: 314 NYNIPEDPELYIHRIGRTGRIGKSGKAFS 342
Score = 41.1 bits (92), Expect = 0.028
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGF I I+ +PK ER T MFSAT P +I+LLA+ FL ++ F+ V V
Sbjct: 157 DMGFIEDIEYIISF--LPK--ERTTYMFSATVPSRIELLAKRFLKSDFKFVKVQSV-ELK 211
Query: 180 ENITQKVV 203
NI +K++
Sbjct: 212 PNIEEKMI 219
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +2
Query: 245 TKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
+K +++R E+ +L+FV+TK+ AD L L Q Y V +HGD+ Q ER+ AL
Sbjct: 386 SKMNEIVKRIGSEKK--VLIFVKTKRSADNLCYKLRDQRYRVACMHGDKVQAERDRALSD 443
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
F++G L+AT VA+RGLDI ++ VI
Sbjct: 444 FKSGAVNYLIATDVASRGLDIRNIEIVI 471
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNL--GVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+++PSD+E Y+HRIGRTGRMG G A S F + LA+DL+ +L A Q+VP+ L
Sbjct: 472 NYEMPSDIENYIHRIGRTGRMGRSVEGEAISLFTYADARLAKDLISVLKGAHQEVPSEL 530
Score = 39.5 bits (88), Expect = 0.085
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
+MGFE Q++ I+ P +RQT+M++AT+P+ IQ A F+++ + + +G +
Sbjct: 314 EMGFEVQVQDIIG-QIRP---DRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHAN 369
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
E++ Q + E D+ S + +++
Sbjct: 370 ESVKQIIEVCQERDRDSKMNEIV 392
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
Q +LVF +TK+G+D+L + L G SI+GD++Q R+ AL F+ G+ L+AT VA
Sbjct: 248 QQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRALIATDVA 307
Query: 470 ARGLDIPHVRHVI 508
ARGLDI + V+
Sbjct: 308 ARGLDIQELEQVV 320
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +++I+ +P ++Q ++FSATF K+I+ +A + + V + V +T+E
Sbjct: 165 DMGFWPDLQRILR--RLPN--DKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTAE 220
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHV 278
+ Q V VD+ KR L L+ ++ V V
Sbjct: 221 TVKQMVYPVDKKRKRELLAYLIGSRNWQQVLV 252
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFD+P E+YVHRIGRTGR G G+A S + L R + LL
Sbjct: 321 NFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLRAIETLL 366
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E + +VF T++ DQL + L +GY S+HG +Q +RE + R RT +LVAT
Sbjct: 299 ESPRSAIVFCRTREEVDQLADSLNGRGYRAESLHGGMSQEQRERVMERLRTATADLLVAT 358
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLD + HV+
Sbjct: 359 DVAARGLDFEQLTHVV 374
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N+ +PS + YVHRIGR GR G GVA
Sbjct: 375 NYSVPSAPDSYVHRIGRVGRAGREGVA 401
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGR 164
DMGF I I+E P+ +RQT++FSAT P ++ +A+ L + V + +GR
Sbjct: 216 DMGFAEDIDAILE--QAPQ--KRQTVLFSATLPPRMDQIARRHLRDPVRIQIGR 265
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K L+Q + E+ Q +LVF TK GA++L + L +IHG+++Q R AL F
Sbjct: 230 KSALLIQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADF 289
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
++G+ +LVAT +AARGLDI + V+
Sbjct: 290 KSGEVRVLVATDIAARGLDIDQLPQVV 316
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFDLP+ E+YVHRIGRTGR G G A S + L RD+ L+
Sbjct: 317 NFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDIERLI 362
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI+ +P +RQ LMFSATF +I+ LA+ + V ++V + +
Sbjct: 161 DMGFIRDIKKILAL--LP--AKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHVPKR 287
+ Q + VD+ K + L+ L+ + V V R
Sbjct: 217 TVKQWICPVDKNQKSALLIQLIKQEDWQQVLVFSR 251
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Frame = +2
Query: 239 GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
G K L + E+ I++FV T+ L E L ++GY T++ G+ Q++RED L
Sbjct: 228 GLDKLDGLTRILEIEDWNAIIIFVRTRVECQFLSEKLAARGYAATALSGEVAQKQREDIL 287
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ G+ I++AT VAARG+DI + HVI
Sbjct: 288 SAMKKGKLDIIIATDVAARGIDIERITHVI 317
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P DV Y HRIGRTGR G G A F + + RD+
Sbjct: 318 NWDIPGDVSTYTHRIGRTGRAGRSGKAILFCKPREQRIIRDI 359
Score = 34.7 bits (76), Expect = 2.4
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF I I+E HT PK ++QT +FSAT P QI+ + + + V + + S +
Sbjct: 163 MGFIEDIDWILE-HT-PK--DKQTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQ 218
Query: 186 ITQKVVW----VDEMDKRSFLLDL 245
I Q +VW +D++D + +L++
Sbjct: 219 IEQ-LVWRARGLDKLDGLTRILEI 241
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K L+Q + E+ Q +LVF TK GA++L + L +IHG+++Q R AL F
Sbjct: 230 KSALLIQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADF 289
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
++G+ +LVAT +AARGLDI + V+
Sbjct: 290 KSGEVRVLVATDIAARGLDIDQLPQVV 316
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFDLP+ E+YVHRIGRTGR G LG A S + L RD+ L+
Sbjct: 317 NFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIERLI 362
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI+ +P +RQ LMFSATF +I+ LA+ + V ++V + +
Sbjct: 161 DMGFIRDIKKILAM--LP--AKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHVPKR 287
+ Q + VD+ K + L+ L+ + V V R
Sbjct: 217 TVKQWICPVDKNQKSALLIQLIKQEDWQQVLVFSR 251
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/55 (49%), Positives = 42/55 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPN 672
N+D P ++EEYVHR+GRTGR G G++ SF ++ G+A +L+++L EA Q+VP+
Sbjct: 425 NYDFPRNIEEYVHRVGRTGRAGRTGISLSFMTRSDWGVAGELIKILKEADQEVPD 479
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F K AD L +IHG+R Q +RE AL + G IL+AT VA+R
Sbjct: 354 VIIFCGKKTRADDLSSEFILSNISCQAIHGNREQSDREQALEDIKNGTVKILIATDVASR 413
Query: 476 GLDIPHVRHVI 508
GLDI + HV+
Sbjct: 414 GLDIEDITHVV 424
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQIRK++ + +RQT+M SAT+P ++ LAQ ++++ + + +G + + +
Sbjct: 267 DMGFEPQIRKVL----LDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAAT 322
Query: 180 ENITQKVVWVDEMDK 224
+TQ + +DE DK
Sbjct: 323 HTVTQVIEVMDEEDK 337
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
+L LVF TK+ D L + ++GY V ++HGD Q++R+ + RFR+G +L+AT VA
Sbjct: 245 ELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLIATDVA 304
Query: 470 ARGLDIPHV 496
ARG+D+ V
Sbjct: 305 ARGIDVDDV 313
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P DVE YVHRIGRT R G G + +F
Sbjct: 318 NYDVPQDVEYYVHRIGRTARAGRTGKSVTF 347
Score = 39.5 bits (88), Expect = 0.085
Identities = 29/83 (34%), Positives = 40/83 (48%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I PK +RQT++FSAT P+ I + + F + F+ + R T
Sbjct: 162 DMGFREDIEDIFR--DTPK--DRQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVP 217
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
I Q + V E DK L L+
Sbjct: 218 QIEQTYIEVRERDKLEALCRTLD 240
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NLLQRARPEEDQLILVFVETKKGADQLEEYL-YSQGYPVTSIHGDRNQREREDALRRFRT 433
+LL+R +PE+ ++F TK+G D+L L + G +IHGD QRER+ L++ R
Sbjct: 277 SLLKREKPEQ---AIIFCRTKRGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVLQKLRD 333
Query: 434 GQTPILVATAVAARGLDIPHVRHVI 508
G LVAT V RG+DI + H++
Sbjct: 334 GNLKFLVATDVVGRGIDISTISHIV 358
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF----NDTNRGLARDLVELLVEAKQD 663
NFD+P D ++YVHR+GRTGRMG GVA +F D + + + +LL+ K D
Sbjct: 359 NFDVPQDCDDYVHRVGRTGRMGRDGVAYTFVVPGEGDILTSIEQRINKLLIRDKMD 414
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF PQI +I+ P+ RQTL+ SAT P ++ LA+ +++ V + R +
Sbjct: 202 DIGFRPQIERIMR--KCPRN--RQTLLLSATLPPVVRRLAESYMHEPVVIDCCRDEMAVD 257
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q+ + + DK L LL +
Sbjct: 258 TIEQRYFTIAQDDKVRLLESLLKRE 282
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK+G D+L L +G ++HGD NQ +RE + RFR G +LVAT VAARG
Sbjct: 248 IVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAARG 307
Query: 479 LDIPHVRHVI 508
LD+ V VI
Sbjct: 308 LDVDDVDTVI 317
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
NFDLP+D E YVHRIGRTGR G G A SF
Sbjct: 318 NFDLPNDPETYVHRIGRTGRAGRTGRAFSF 347
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
L+ + E+ + +L+F TK ++L + L TSIHGD Q +R+ L FR G+
Sbjct: 237 LVHLVKSEDYRQLLIFTATKLDTERLAKLLMDNDIDATSIHGDMLQNQRKRTLEDFRRGR 296
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
+LVAT VAARGLDI + HVI
Sbjct: 297 VGVLVATDVAARGLDIRTLSHVI 319
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NFDLP + E+++HR GRTGR G G+A S
Sbjct: 320 NFDLPINPEDFIHRTGRTGRAGATGIAIS 348
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFIGFT-KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q ++F+ F K T L+ A + I+VF T + +L L G+P +HG +Q
Sbjct: 320 QHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQ 379
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ R AL +F+TG ILVAT VA+RGLDIP V V+
Sbjct: 380 QARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVV 416
Score = 37.5 bits (83), Expect = 0.34
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLG 582
N+D+P++ ++Y+HR+GRT R G G
Sbjct: 417 NYDIPTNSKDYIHRVGRTARAGRSG 441
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK+ ADQL + LY +++HGD +Q R + RF+ +T ILVAT +A+RG
Sbjct: 247 IIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKILVATDLASRG 306
Query: 479 LDIPHVRHV 505
+D+ ++ HV
Sbjct: 307 IDVKNISHV 315
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P IRKI + ++Q LMFSATF IQ +AQ+FL N V +++ S +
Sbjct: 160 DMGFVPDIRKIYNATSK----KQQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHK 215
Query: 183 NITQKVVWVDEMDKRSFLLD 242
NI Q + + D + +LD
Sbjct: 216 NIKQLIYFADNQSHKQQMLD 235
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P E+Y+HRIGRTGR N G+A S + T+R R +
Sbjct: 317 NYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREFLRKI 358
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +2
Query: 239 GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
G K L + E +++FV TK ++L E L ++G +I+GD Q +RE +
Sbjct: 238 GLHKLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTI 297
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ + G+ ILVAT VAARGLD+ + HV+
Sbjct: 298 HQLKDGKLDILVATDVAARGLDVERISHVL 327
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P DVE YVHRIGRTGR G G A F +G+ R +
Sbjct: 328 NYDIPYDVESYVHRIGRTGRAGRSGEAILFVTPREKGMLRQI 369
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MGF + +++ +P + RQ +FSAT P QI+ +AQ +L + + + + +T+ N
Sbjct: 173 MGFIEDVEEVLR--KLPAS--RQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAAN 228
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQT 260
I Q+ WV + K L +L +T
Sbjct: 229 IRQRYWWVSGLHKLDALTRILEVET 253
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/100 (37%), Positives = 55/100 (55%)
Frame = +2
Query: 209 RRNGQAFLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGD 388
R Q FL K LL + D L+F TK+ AD++ +++ G+ V IH D
Sbjct: 215 RAEQQVFLADQHEKLPLLLTLLERDGDST-LIFTRTKRRADKIWKHIGRAGHKVARIHAD 273
Query: 389 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
R+Q +R AL F+ G +LVAT +AARG+D+ + HV+
Sbjct: 274 RSQAQRRMALDGFKDGTYRVLVATDIAARGIDVAEIGHVV 313
Score = 52.8 bits (121), Expect = 9e-06
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF+PQ+ +I+ +PK +RQTL+FSAT ++ A+ L + V + V R G+T+
Sbjct: 159 DMGFKPQLDRILR--RLPK--QRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAA 214
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
Q+V D+ +K LL LL
Sbjct: 215 RAEQQVFLADQHEKLPLLLTLL 236
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVEL 642
NFDLP E+YVHR+GRT R G A+SF R L + L
Sbjct: 314 NFDLPHVPEDYVHRVGRTARAAASGRASSFSAPDERDLLHAIERL 358
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLT 681
N+ P E+YVHRIGRTGR G GVA +FF N+GLA +LV +L EA Q VP LT
Sbjct: 456 NYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALT 513
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 335 LEEYLYSQ-GYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVII 511
L++Y +Q G+ S+HGD+ Q +R AL F+ G P+++AT VA+RGLDIP V VI
Sbjct: 397 LDKYHKAQRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVIN 456
Query: 512 LIYHLT 529
Y LT
Sbjct: 457 YSYPLT 462
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVG-ST 176
DMGFEP++R I+ RQT+MFSAT+P + LAQ+F+ N + + +G +
Sbjct: 318 DMGFEPEVRAILS----QTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAA 373
Query: 177 SENITQKVVWVDEMDKRSFLLDLLN 251
+ ++ Q V +D+ + S L+ LL+
Sbjct: 374 NHDVMQIVEVLDDRSRDSRLVALLD 398
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
+L LVF TK D + E L S+GY ++HGD NQ++R+ + FR G ILVAT VA
Sbjct: 249 KLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKGSIEILVATDVA 308
Query: 470 ARGLDIPHVRHV 505
RG+D+ +V V
Sbjct: 309 GRGIDVNNVEAV 320
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+DLP D E+YVHRIGRTGR G G+A SF
Sbjct: 322 NYDLPRDGEDYVHRIGRTGRAGKKGIAFSF 351
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 275 RPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILV 454
+ E+ Q +L+FV +K+ A+ +E LY G +++HGD Q+ER AL F G+ IL+
Sbjct: 241 KQEKWQQLLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGALEDFSKGRCKILI 300
Query: 455 ATAVAARGLDIPHVRHVI 508
AT +AARG+DIP + V+
Sbjct: 301 ATDLAARGIDIPSLPCVL 318
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/85 (28%), Positives = 47/85 (55%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF ++ I++ G QTL+FSATFP +++ L ++ L N V ++V + + +
Sbjct: 163 DLGFADELDDILD----QTPGNVQTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPD 218
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+ Q+ + VD ++ L L+ +
Sbjct: 219 QLHQRAIEVDRNNRTMLLKHLIKQE 243
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+DLP +YVHR GRT R G G+A SF
Sbjct: 319 NYDLPRATSDYVHRAGRTARAGEAGLAISF 348
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NLLQR-ARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT 433
NLL + E + +VF+ TK AD L +G +IHG+R+Q +RE AL FR
Sbjct: 297 NLLPEFLKKEGPERTIVFMRTKHRADSCCRRLERKGIKAAAIHGNRSQAQRERALSAFRD 356
Query: 434 GQTPILVATAVAARGLDIPHVRHVI 508
G +LVAT V ARG+DI VR+V+
Sbjct: 357 GTVDVLVATDVLARGIDISDVRYVV 381
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
NFD+P++ +Y+HRIGRTGR G LG A +F +
Sbjct: 382 NFDVPAEPTDYIHRIGRTGRAGELGWAITFVTE 414
Score = 37.9 bits (84), Expect = 0.26
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +R+IV ERQTL+FSAT ++ D + + + + ST++
Sbjct: 226 DMGFLPAVRRIVR----ETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTAD 281
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
+ Q V V K + L + L +
Sbjct: 282 TVDQFVFPVSIEAKNNLLPEFLKKE 306
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FVETKK + L YL G+ S+HGD+ Q++R+ ++ F+ + +L AT VA+R
Sbjct: 317 VLIFVETKKDCEDLASYLSEHGFFCMSLHGDKTQQQRDYVMKEFKASKCKLLCATDVASR 376
Query: 476 GLDIPHVRHVI 508
GLD+ + VI
Sbjct: 377 GLDVRDISLVI 387
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNY-VFLAVGRVGST- 176
DMGFE Q+RKI + + +RQT+ FSAT+PK +Q LA D +N + L +G T
Sbjct: 229 DMGFEQQVRKI-DSYIRE---DRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTI 284
Query: 177 SENITQKVVWVDEMDKRSFLLDLL 248
++NITQ+ + + + +K+ LL +L
Sbjct: 285 NKNITQETICLYQNEKQEELLYIL 308
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLG--VATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D P+ ++ YVHRIGRTGR G+ G + + + +A+ LV+LL +++Q V
Sbjct: 388 NYDFPNQIDNYVHRIGRTGRAGDKGRSITMITLDAMDPRVAKQLVDLLKDSEQVV 442
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 66.9 bits (156), Expect = 5e-10
Identities = 38/96 (39%), Positives = 49/96 (51%)
Frame = +2
Query: 221 QAFLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQR 400
+ FL K LL D I++FV KKG D L + L GY ++HG + Q
Sbjct: 642 KVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQE 701
Query: 401 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+RE AL + G ILVAT VA RG+DI V V+
Sbjct: 702 QREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVV 737
Score = 50.4 bits (115), Expect = 5e-05
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 22/104 (21%)
Frame = +3
Query: 3 DMGFEPQIRKIVE----CHTMPKTGE------------------RQTLMFSATFPKQIQL 116
DMGFEP ++KI+E + P T E RQT+MF+AT P ++
Sbjct: 556 DMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVER 615
Query: 117 LAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
LA+ +L + +G G E + QKV + E +KR LL +L
Sbjct: 616 LARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Score = 49.6 bits (113), Expect = 8e-05
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEA 654
N+D+ ++E+Y+HRIGRTGR G GVA +F + + +L + ++E+
Sbjct: 738 NYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
Q +LVF +TK+G+D L L G SI+GD++Q R+ AL F++G+ L+AT VA
Sbjct: 248 QQVLVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVA 307
Query: 470 ARGLDIPHVRHVI 508
ARGLDI + V+
Sbjct: 308 ARGLDIAQLEQVV 320
Score = 54.0 bits (124), Expect = 4e-06
Identities = 34/92 (36%), Positives = 52/92 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I++I++ MP+ ERQTL+FSATF +++ LA + V + V ST++
Sbjct: 165 DMGFLPDIQRIMK--RMPE--ERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTAD 220
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHV 278
+ Q V VD+ K L L+ ++ V V
Sbjct: 221 TVKQMVYPVDKKRKSELLAYLIGSRNWQQVLV 252
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
NFD+P E+YVHRIGRTGR G G+A SF + L + + LL
Sbjct: 321 NFDMPYKAEDYVHRIGRTGRAGQTGLAVSFMSRDEEYLLQAIENLL 366
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 66.5 bits (155), Expect = 6e-10
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 LLQRARPEEDQL--ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT 433
LL+R E L ++F K+ + + L G+ V ++HGD +Q R AL +FR
Sbjct: 234 LLRRLLREAKDLKNAIIFCNRKREVAIVHKSLQKHGFSVGALHGDMDQPARMAALEQFRK 293
Query: 434 GQTPILVATAVAARGLDIPHVRHV 505
G+ P+LVA+ VAARGLDIP V HV
Sbjct: 294 GELPLLVASDVAARGLDIPEVSHV 317
Score = 49.6 bits (113), Expect = 8e-05
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I +I C +P T RQTL F+AT P +I+ + + FL+N + V + +T+
Sbjct: 160 DMGFIPDIERI--CKLVPFT--RQTLFFTATMPPEIRRITETFLHNPQKVEVSKPATTAV 215
Query: 183 NITQKVVWVDEM--DKRSFLLDLL 248
+TQ V + +KR L LL
Sbjct: 216 TVTQSQVPAGKKAHEKRELLRRLL 239
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NFD+P ++YVHR+GRTGR G G A S
Sbjct: 319 NFDVPHHPDDYVHRVGRTGRAGRSGTAIS 347
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
L + A D +VF TK+ + E L GY ++HGD +Q +R+ ++ FR Q
Sbjct: 233 LKRLADANPDIFSVVFCRTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAFRGRQ 292
Query: 440 TPILVATAVAARGLDIPHVRHVI 508
+LVAT VAARG+D+ +V HV+
Sbjct: 293 IQMLVATDVAARGIDVDNVTHVV 315
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N+ LP ++E Y HR GRTGR G LG +
Sbjct: 316 NYQLPDEIETYNHRSGRTGRAGKLGTS 342
Score = 36.7 bits (81), Expect = 0.60
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ T P E+ T +FSAT P ++ + + F+ + + + VG S S
Sbjct: 160 NMGFYEDIVNILS--TTPD--EKNTWLFSATMPAEVARIGKQFMTDPIEITVGAKNSGSA 215
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
++ + V+ D+ L L +A
Sbjct: 216 TVSHEYYLVNARDRYEALKRLADA 239
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF TK G +L +L +G T+IHGD+ Q ER +L F+ G+ +LVAT VAAR
Sbjct: 270 VIVFSNTKLGTARLARHLEKEGVSSTAIHGDKTQIERTKSLEAFKAGEVTVLVATDVAAR 329
Query: 476 GLDIPHVRHVI 508
GLDI + VI
Sbjct: 330 GLDIADLPCVI 340
Score = 63.7 bits (148), Expect = 5e-09
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P +++I+ + +PKT RQ L+FSATF +IQ LA+ F+ + + V R +TSE
Sbjct: 184 DMGFLPDLQRII--NLLPKT--RQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSE 239
Query: 183 NITQKVVWVD-EMDKRSFLLDLLNAQTCYNVHV 278
NI Q + +D E DKR + L+ ++ V V
Sbjct: 240 NIKQVIFALDSEEDKRMAVCHLIQSKALSQVIV 272
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEA 654
N+DLP+ E+YVHRIGRTGR G G A SF + +D+ +L+ +A
Sbjct: 341 NYDLPTTPEDYVHRIGRTGRAGAKGTAYSFVVKRDERALKDIEKLIGKA 389
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQG--YPVTSIHGDRNQREREDALRRFRTGQTPILV 454
+E L+F TKKGAD L+ Y+ S G + ++HGD +Q RE ++ F+ + I+V
Sbjct: 386 DEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKNKRLDIVV 445
Query: 455 ATAVAARGLDIPHVRHVI 508
AT VA+RGLDI + HVI
Sbjct: 446 ATDVASRGLDIKGISHVI 463
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT---NRGLARDLVELLVEAKQDVPN 672
NF LPSD E YVHRIGRTGR G LG + S ++ + L DL LL ++Q+VP+
Sbjct: 464 NFSLPSDCETYVHRIGRTGRAGALGTSHSILSNNSLDDMELVGDLTNLLQRSEQEVPS 521
Score = 37.9 bits (84), Expect = 0.26
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGST-S 179
+MGFE QI I P +RQ L +SAT+PK++ A+ + + L +G T +
Sbjct: 300 EMGFEQQIDGIFNS-IRP---DRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTAN 355
Query: 180 ENITQKVVWV-DEMDKRSFLLDLL 248
+NI+QK V + DK L+D L
Sbjct: 356 KNISQKFKIVPTDADKVDALMDTL 379
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +2
Query: 287 DQLILVFVETKKGADQL-EEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
D I++F+ K+ AD L E++ VT +HG ++Q +RE +L+ FRT + I++AT
Sbjct: 436 DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATN 495
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDIP+V V+
Sbjct: 496 VAARGLDIPNVSLVV 510
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT-NRGLARDL 633
NF + +++Y+HRIGRTGR N G A SF + + L R+L
Sbjct: 511 NFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
Score = 39.9 bits (89), Expect = 0.064
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTG--ERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGST 176
D+GFE Q+ I+ + RQTLMF+AT I+ +A ++ V+ +G V +
Sbjct: 348 DLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIG-VETG 406
Query: 177 SENITQKVVWVDEMDKRSF 233
SE + Q+VV + D+ F
Sbjct: 407 SEPLIQQVVEYADNDEDKF 425
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK+ D L E + + V+S+HGD Q+ERE ++ FR+G + +L++T V ARG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 479 LDIPHVRHVI 508
LD+P V +I
Sbjct: 341 LDVPQVSLII 350
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR+GR G GVA +F + + + RD+ + ++P
Sbjct: 351 NYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 221 QAFLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQR 400
Q ++ G K + + EE +VFV T++ ++L ++L ++G+ ++HGD Q
Sbjct: 243 QYWVVKGVEKDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQS 302
Query: 401 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHV 505
RE + + G ILVAT V ARGLD+P + HV
Sbjct: 303 LRERTVDHIKQGVIDILVATDVVARGLDVPRITHV 337
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N+D+P DVE Y+HRIGRTGR G G A
Sbjct: 339 NYDIPFDVESYIHRIGRTGRAGRKGKA 365
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 66.1 bits (154), Expect = 9e-10
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLI--LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
K L RA E+ Q+ +VF K D + + L S G+ +IHGD +Q +R L
Sbjct: 231 KAKRLALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLA 290
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHV 505
FR G ILVA+ VAARGLDIP V HV
Sbjct: 291 AFRDGSLKILVASDVAARGLDIPAVSHV 318
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF P I +I + T PK +QTL FSAT P +I L + FL + V + R +T+E
Sbjct: 161 DMGFIPDIERIFKM-TPPK---KQTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNE 216
Query: 183 NITQKVVWVDEMDKRSFLLDL 245
NITQ +V V D ++ L L
Sbjct: 217 NITQLMVKVPSSDPKAKRLAL 237
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGV 585
N+D+P ++YVHRIGRTGR G GV
Sbjct: 320 NYDVPHHADDYVHRIGRTGRAGRSGV 345
>UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 370
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/88 (34%), Positives = 53/88 (60%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K LL + + ++VF K+ D++E++LY + SIHGD++Q R+ + F
Sbjct: 70 KNDKLLSVLKSVHNDKVIVFCNQKRTCDRIEDFLYDNRFNGASIHGDKSQAARDAVIAGF 129
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVII 511
++G+ IL+AT VA RGLD+ +V+ ++
Sbjct: 130 KSGRKNILIATDVAERGLDVDNVKMDVV 157
Score = 53.2 bits (122), Expect = 6e-06
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGE-RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
MGFEPQ+ KI+ PKT + R TLM+SAT+P++++ LA +++ +Y+ + +G
Sbjct: 1 MGFEPQLNKII-----PKTHKNRHTLMWSATWPREVRSLANNYMKDYIQVTIGDDSLKGN 55
Query: 183 -NITQKVVWVDEMDKRSFLLDLLNA 254
I Q V V++ +K LL +L +
Sbjct: 56 IKIKQTVEVVNDREKNDKLLSVLKS 80
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 66.1 bits (154), Expect = 9e-10
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
L+F TK+ +L L GY IHGD +Q +RE + RFR G +LVAT VAARG
Sbjct: 243 LIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSLLVATDVAARG 302
Query: 479 LDIPHVRHVIILIYHLTWKN 538
+ +P V V+ Y L ++N
Sbjct: 303 IHVPDVEAVV--NYDLPFEN 320
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLG 582
N+DLP + E YVHRIGRTGR G+ G
Sbjct: 313 NYDLPFENEYYVHRIGRTGRAGSSG 337
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 66.1 bits (154), Expect = 9e-10
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +2
Query: 275 RPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILV 454
R + L+++F K D L L IHG ++Q RE+AL FRT Q PILV
Sbjct: 457 RRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVIHGSKSQEAREEALEDFRTHQAPILV 516
Query: 455 ATAVAARGLDIPHVRHVI 508
AT VAARG+D+P+V VI
Sbjct: 517 ATDVAARGIDVPNVSLVI 534
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+ + +EY+HRIGRTGR GNLG + +F +D + L + L ++ VP WL
Sbjct: 535 NYQMSKKFDEYIHRIGRTGRAGNLGESYTFLDDADAETFMPLKKFLKSGRKKVPEWL 591
>UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 620
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLY-SQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+VFV++K GAD L + + S G V S+HGD+ Q +R L+RFR G +LV+TAV R
Sbjct: 473 IVFVDSKLGADLLAQAVEKSCGVAVASLHGDKPQIQRNGILQRFRDGAYDVLVSTAVLGR 532
Query: 476 GLDIPHVRHVI 508
G+D+P V+ VI
Sbjct: 533 GIDLPGVKMVI 543
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
+GF+ Q+ I+ H +P QT+ SAT P I+ +A L N VF++VG + +
Sbjct: 386 LGFQQQVYDIMT-H-LPDN--HQTIFTSATIPSSIEKMASSLLSNPVFISVGTPSTPCTS 441
Query: 186 ITQKVVWVDEMDKRSFLLDLL 248
+ Q ++WV+E K+ L +L
Sbjct: 442 VKQTILWVEEPSKKKKLFAVL 462
>UniRef50_UPI00003C10F5 Cluster: hypothetical protein UM00313.1;
n=1; Ustilago maydis 521|Rep: hypothetical protein
UM00313.1 - Ustilago maydis 521
Length = 136
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D P++ E+YVH+IGRTGR G G A ++F N AR+L+ +L EAKQ++P
Sbjct: 34 NYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSARELIGILREAKQEIP 87
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 QAFLFIGFTKCTNLLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQ 397
Q F+ NLL +D + LVF TK GAD++ +YL +IHG++ Q
Sbjct: 302 QQIFFVDKGNKNNLLVHLLKNQDIKTALVFTRTKHGADKVVKYLLKHDITAAAIHGNKAQ 361
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
R+ AL F+ +LVAT +AARG+D+ + +VI
Sbjct: 362 NARQRALTNFKEQTMRVLVATDIAARGIDVDELEYVI 398
Score = 60.1 bits (139), Expect = 6e-08
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF IRKI+ +PK ++Q+L FSAT P +I LA L+N V ++V V ST E
Sbjct: 243 DMGFIHDIRKILA--ELPK--KKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSSTVE 298
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
I Q++ +VD+ +K + L+ LL Q
Sbjct: 299 IINQQIFFVDKGNKNNLLVHLLKNQ 323
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVE 651
NFD+ + E YVHRIGRTGR G G A SF + + RD+ +L+ +
Sbjct: 399 NFDMSNIAETYVHRIGRTGRAGAKGTAISFCDAEEKEYLRDVEKLIAK 446
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
D ++F TK+ ++ E L GY ++HGD +Q +R+ ++ FR Q +LVAT V
Sbjct: 241 DIFSVIFCRTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSFRNNQIQMLVATDV 300
Query: 467 AARGLDIPHVRHVI 508
AARG+D+ + HVI
Sbjct: 301 AARGIDVDDITHVI 314
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVE 651
N+ LP ++E Y HR GRTGR G G + + + L ++L +
Sbjct: 315 NYQLPDEIETYTHRSGRTGRAGKTGTSMVIVTKSEMRKIKQLEKILAK 362
Score = 37.1 bits (82), Expect = 0.45
Identities = 22/84 (26%), Positives = 46/84 (54%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ P+ ++ T +FSAT P+++ +A++F+++ + + VG ++
Sbjct: 159 NMGFYEDITNILA--DTPE--DKLTWLFSATMPREVARIAKEFMHDPLEITVGHKNEGAK 214
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
N++ + V D+ L L +A
Sbjct: 215 NVSHEYYVVHTRDRYQALKRLSDA 238
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/92 (35%), Positives = 54/92 (58%)
Frame = +2
Query: 233 FIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRERED 412
F+ + N L A + ++I +FV++K AD L +G +HG R+Q +RE
Sbjct: 321 FLRVCEIVNFLTAAHGQNYKMI-IFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREM 379
Query: 413 ALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+L R+G+ ILVAT +A+RG+D+P + HV+
Sbjct: 380 SLNMLRSGEVQILVATDLASRGIDVPDITHVL 411
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P D+EEYVHR+GRTGR G G A SF +R L+++L +++Q+VP+ L
Sbjct: 412 NYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRD 471
Query: 688 A 690
A
Sbjct: 472 A 472
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
++ +L+F + K ADQL L + + S+HG++ Q +RE L FR+G +LVAT V
Sbjct: 564 EKKVLIFSDLKSFADQLTSALRYRRFKSASLHGNKTQAQRERILNMFRSGDVNVLVATDV 623
Query: 467 AARGLDIPHVRHVIIL 514
AARGLDI + +VI L
Sbjct: 624 AARGLDIKDIDYVINL 639
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFEPQIRKIV P +RQTLMFSAT+P +I+ LA +F N +++ VG + T+
Sbjct: 479 DMGFEPQIRKIVG-QIRP---DRQTLMFSATWPSEIKRLASEFCKANSIYIQVGDLELTA 534
Query: 180 E-NITQKVVWVDEMDKRSFLLDLLNA 254
NI Q V + + + R L D L +
Sbjct: 535 NPNIRQNVEFPNSYEVRDKLFDFLGS 560
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DT----NRGLARDLVELLVEAKQDVPN 672
N D+P + +Y+HRIGRTGR + G + +F DT A+DL +LL + Q VP+
Sbjct: 638 NLDVPKSLLDYIHRIGRTGRGNSKGESLLYFPIDTLTPAKVKFAQDLSKLLSKVNQTVPS 697
Query: 673 WLTSTA 690
LT A
Sbjct: 698 QLTQIA 703
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FV K +++L L + V +HGD +Q ER L +F+ + PILVAT VAAR
Sbjct: 354 VLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVAAR 413
Query: 476 GLDIPHVRHVI 508
GLDIP ++ VI
Sbjct: 414 GLDIPSIKTVI 424
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+R I + P +RQTL+FSATF K+++ L +D L + V + +G +G +E
Sbjct: 267 DMGFEPQVRSIAN-NVRP---DRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELGEANE 322
Query: 183 NITQKV 200
++TQ V
Sbjct: 323 DVTQIV 328
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+ D+ + HRIGRTGR G G A + +++ A DLV L A Q VP L +
Sbjct: 425 NYDVARDITTHTHRIGRTGRAGEKGNAYTLLTQSDQNFAGDLVRNLEIANQVVPESLMAL 484
Query: 688 A 690
A
Sbjct: 485 A 485
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
E IL+F +TK+ D L + L Y +IHGD+ QRER+ L +R+ + ILVAT
Sbjct: 573 EGNKILIFCDTKRNCDSLCKELRYHQYNALAIHGDKEQRERDRILSNYRSDRCNILVATD 632
Query: 464 VAARGLDIPHVRHVI 508
VA+RGLDI ++ V+
Sbjct: 633 VASRGLDIKNISVVV 647
Score = 56.0 bits (129), Expect = 9e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF----NDTNRG-LARDLVELLVEAKQDVPN 672
N+DLP+ +E+Y+HRIGRTGR G G A FF +G ARDLV+LL +A VP
Sbjct: 648 NYDLPNTIEDYIHRIGRTGRAGQKGRAVLFFPYDYYVPQKGRFARDLVKLLSKANHAVPA 707
Query: 673 WLTSTA 690
L A
Sbjct: 708 ELREIA 713
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F ETKK + L + L QGY S+HGD++Q +R+ +++F+ T ++ AT +A+R
Sbjct: 319 VLIFAETKKRCEDLSQSLTKQGYFCISLHGDKSQDQRDAIMKQFKDSNTRLICATDIASR 378
Query: 476 GLDIPHVRHVI 508
GLD+ + V+
Sbjct: 379 GLDVKDITVVV 389
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/83 (36%), Positives = 55/83 (66%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQ+R IV T+ + +RQT++ SAT+P ++Q L+++F Y+ + + +G+
Sbjct: 237 DMGFEPQVRDIVS--TIRE--DRQTILLSATWPNEVQQLSKEFCYDPILVKIGK----GA 288
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
ITQK++ + +K L+++L+
Sbjct: 289 PITQKIICTGQKEKLHVLMNVLD 311
Score = 41.1 bits (92), Expect = 0.028
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRG-LARDLVELLVEAKQDV 666
N+D P ++Y+HRIGRTGR G G + S + + + G LA ++ L Q+V
Sbjct: 390 NYDFPKSFDDYIHRIGRTGRAGAHGRSFSLLSYEKDEGILADQVITYLNSCNQEV 444
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF +TK+ AD+L Y ++ + ++HGD +Q +RE L FR G ILVAT VAARG
Sbjct: 353 IVFTQTKRDADRLS-YALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARG 411
Query: 479 LDIPHVRHVI 508
LD+P+V +I
Sbjct: 412 LDVPNVDLII 421
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGL 621
+++LP++ E +VHR GRTGR G G A ++ D +R +
Sbjct: 422 HYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAV 460
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E + ++VFV TK+ +++ E L ++G+ +I GD Q +RE + R G ILVAT
Sbjct: 248 EPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVAT 307
Query: 461 AVAARGLDIPHVRHVI 508
VAARGLD+ + HV+
Sbjct: 308 DVAARGLDVERISHVL 323
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P D E YVHRIGRTGR G G A F
Sbjct: 324 NYDIPHDTESYVHRIGRTGRAGRSGAALIF 353
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FV K A++L L +G+ + +HGD +Q ER + F+ P+LVAT VAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 476 GLDIPHVRHVI 508
GLDIP ++ VI
Sbjct: 561 GLDIPSIKTVI 571
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE Q+R I H P +RQTL+FSATF K+I+ LA+D L + + + G +G +E
Sbjct: 414 DMGFEYQVRSIAS-HVRP---DRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANE 469
Query: 183 NITQKV 200
++TQ V
Sbjct: 470 DVTQIV 475
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+ D++ + HRIGRTGR G GVA + + A DLV L A Q V L
Sbjct: 572 NYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDL 631
Query: 688 A 690
A
Sbjct: 632 A 632
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F +TKK A ++ L G V +HG+ +Q +R +ALRRF+ Q ILVAT VAAR
Sbjct: 429 VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAAR 488
Query: 476 GLDIPHVRHVIIL 514
GLDI V+ VI L
Sbjct: 489 GLDIDGVKTVINL 501
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVE 639
N +P V+ YVHR+GRT R G G + S + R + +++V+
Sbjct: 500 NLTMPGTVKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIVK 543
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 281 EED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVA 457
EED ++FV TK +L + L ++GY +++GD Q+ RE + + + GQ I+VA
Sbjct: 281 EEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQLDIVVA 340
Query: 458 TAVAARGLDIPHVRHVI 508
T VAARGLD+ + HVI
Sbjct: 341 TDVAARGLDVSRISHVI 357
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P D E YVHRIGRTGR G G A F
Sbjct: 358 NYDIPYDTEAYVHRIGRTGRAGRTGSAILF 387
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +2
Query: 254 TNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT 433
++LL A P+ +VF TK +++ + L G+ ++HGD +Q ERE L FR
Sbjct: 230 SDLLYVASPDR---AMVFTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQ 286
Query: 434 GQTPILVATAVAARGLDIPHVRHVI 508
G+ +LVAT VAARGLDIP V V+
Sbjct: 287 GEVRVLVATDVAARGLDIPQVDLVV 311
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAV 158
MGFE ++ ++ T P RQTL+FSAT P + LA+ ++ N V + V
Sbjct: 159 MGFEEEVEALLSA-TPPS---RQTLLFSATLPSWAKRLAERYMKNPVLINV 205
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT--NRGLARDLVELLVEAKQDV 666
N+D PS +E+YVHR+GRTGR GN G A + F DT N +AR L+++L E KQ +
Sbjct: 657 NYDFPSSLEQYVHRVGRTGRQGNKGHALTLFTDTPQNTPMARGLIKILEECKQQI 711
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +2
Query: 293 LILVFVETKKGA-------DQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPIL 451
LIL+FV T K +++ + + Y +IHGD Q ER+ + F++G+ IL
Sbjct: 577 LILIFVNTIKSVKPILTVIEKMCDQFRERKYKCGAIHGDMKQFERDSVIDNFKSGKISIL 636
Query: 452 VATAVAARGLDI-PHVRHVI 508
VAT + RG+ I ++R VI
Sbjct: 637 VATDILGRGIHIGGNLRFVI 656
Score = 44.4 bits (100), Expect = 0.003
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAV-------GR 164
+GF Q++KI E P +RQTLMFSATFP+ +Q A+ +L N + + V G
Sbjct: 479 LGFGDQLQKISE-QIRP---DRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGS 534
Query: 165 VGSTSENITQKVVWVDEMDKRSFLLDLLNA 254
S+N+ Q V + E +K +L +N+
Sbjct: 535 TSIISKNVKQVVKPIAEKEKSKYLTTFINS 564
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQ-GYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
+++F+ KK AD L L + + VT++HG ++Q +RE +L RTG+ I++AT VAA
Sbjct: 449 VIIFINYKKTADWLATKLQEETNFKVTTLHGSKSQDQREYSLNLLRTGRVQIMIATNVAA 508
Query: 473 RGLDIPHVRHVI 508
RG+DIP+V V+
Sbjct: 509 RGIDIPNVGLVV 520
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N+ + E+Y+HRIGRTGR G G A SF D
Sbjct: 521 NYQISDSFEDYIHRIGRTGRAGKEGTAISFVGD 553
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K + L+ + E+ L++VF T+ D +++ L +IHG Q +R+ L +F
Sbjct: 224 KFSLLVHLLKSEKSGLVMVFCNTRSNVDFVQKNLRKNDIDAIAIHGGHTQAKRKSTLSKF 283
Query: 428 RTGQTPILVATAVAARGLDIPHVRHV 505
+ LV T VAARGLDIPHV HV
Sbjct: 284 HSSNAHALVCTDVAARGLDIPHVSHV 309
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRG 618
NFD+P D EYVHRIGRT R G G + D ++G
Sbjct: 311 NFDIPDDPSEYVHRIGRTARAGREGKVINVVADVDKG 347
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIV-ECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTS 179
DMGF + +I+ EC + +RQT+MFSAT K IQ L+ ++ N + S
Sbjct: 156 DMGFIDDVEEIIDECPS-----DRQTMMFSATVSKDIQYLSSKYM-NNPSKVFAKAYVDS 209
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNAQ 257
+ + Q + V + K S L+ LL ++
Sbjct: 210 DKLKQVYIDVPKKMKFSLLVHLLKSE 235
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF+ K+ AD L + L G ++HGD++Q ERE AL +F++GQT +L+AT + ARG
Sbjct: 240 LVFIGAKENADGLAKKLNKAGISTNALHGDKSQAEREAALAQFKSGQTQVLIATDLLARG 299
Query: 479 LDIPHVRHVI 508
+ I + VI
Sbjct: 300 IHIEQLPVVI 309
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NF+LP E YVHR+GRT R G GVA S
Sbjct: 310 NFELPMHAETYVHRVGRTARAGEQGVALS 338
Score = 37.9 bits (84), Expect = 0.26
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF P ++ I + +RQT MFSATF +++ A+ + +A + ST++
Sbjct: 154 NMGFWPDVQNIAG----QISNQRQTAMFSATFSDELKGKAKLLMQAPKQVAAHQENSTNQ 209
Query: 183 NITQKVVWVDEMDKRSFLLDLL--NAQTCYNVHVPKRINLYLCLWKLRKVRIN 335
+I + + V++ K L++L+ NA T V + + N KL K I+
Sbjct: 210 DIAETLYLVNKGSKTKALIELIQKNAWTQALVFIGAKENADGLAKKLNKAGIS 262
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L +VF TK+ D++ +YL QG V IHGD RER+ +R+ + +VAT +AA
Sbjct: 245 LAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVATDLAA 304
Query: 473 RGLDIPHVRHVI 508
RG+DI V HVI
Sbjct: 305 RGIDIEGVSHVI 316
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAK 657
N ++P +++ ++HR+GRTGR G G A + ++ + + +L V K
Sbjct: 317 NAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPADDEAITQIEQLGVSFK 366
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I++F TK+ ++L + L G+ + +HGD Q +R ++ R G+ ILVAT VAAR
Sbjct: 287 IIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCKILVATDVAAR 346
Query: 476 GLDIPHVRHVI 508
GLD+P + HVI
Sbjct: 347 GLDVPALSHVI 357
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
N+DLP E+YVHRIGR GR G GVA S + +R
Sbjct: 358 NYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDR 393
Score = 35.1 bits (77), Expect = 1.8
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I+ + +RQT+M SAT+ + +A F N +++ +V S
Sbjct: 204 DMGFADDISDILRAAPI----DRQTIMCSATWDGPVGKIAASFTKNPERVSI-KV--ESA 256
Query: 183 NITQKVVWVDEMDKRSFLLD 242
+I +KV + D+ D ++ LLD
Sbjct: 257 HIEEKVYYCDDFDHKNRLLD 276
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I++FV KKGAD L + L G+ T +HG + Q +RE AL+ + G + ILVAT VA R
Sbjct: 576 IIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGR 635
Query: 476 GLDIPHVRHVI 508
G+D+ V V+
Sbjct: 636 GIDVKDVSLVL 646
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEA 654
N+D+ +E+Y HRIGRTGR G G A +F + + DL ++LVE+
Sbjct: 647 NYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 69 RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
RQT+MF+AT I+ LA+ +L + +G G +E + Q V V E KR L+++L
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVL 568
Query: 249 NAQ 257
+Q
Sbjct: 569 ESQ 571
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F +TKK A ++ L G V +HG+ +Q +R +ALRRF+ Q ILVAT VAAR
Sbjct: 466 VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAAR 525
Query: 476 GLDIPHVRHVI 508
GLDI V+ VI
Sbjct: 526 GLDIEGVKTVI 536
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVE 639
NF +P+ ++ YVHR+GRT R G G + S + R + +++V+
Sbjct: 537 NFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVK 580
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVF TK GAD++ + L Q ++IHG+++Q R AL F+ G ILVAT +AAR
Sbjct: 269 VLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILVATDIAAR 328
Query: 476 GLDIPHVRHVIIL 514
G+DI + +VI L
Sbjct: 329 GIDIHQLPYVINL 341
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N DLP+ E+YVHRIGRTGR G G A S
Sbjct: 340 NLDLPNVAEDYVHRIGRTGRAGEAGHAIS 368
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+K++E +PK RQ +MFSATF I+ LA L + V + +
Sbjct: 184 DMGFIRDIKKVIEY--LPKN--RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAP 239
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I V D K L L+
Sbjct: 240 TIEHLVHPCDMARKVDLLCHLI 261
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 212 RNGQAFLFI-GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGD 388
R QA L + K +L+ EE ++ FV TK+ L L ++GY +++GD
Sbjct: 236 RIDQAHLMVHADQKTAAVLRLLEVEEFDALIAFVRTKQATLDLAGALEAKGYKAAALNGD 295
Query: 389 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHV 505
Q +RE + + G+ I+VAT VAARG+D+P + HV
Sbjct: 296 IAQNQRERVIESLKDGRLDIVVATDVAARGIDVPRITHV 334
Score = 40.3 bits (90), Expect = 0.049
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N D+P D E YVHRIGRTGR G G A
Sbjct: 336 NVDMPYDPESYVHRIGRTGRAGRDGRA 362
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
Q +LVF T+ AD+L L G P +HG++ Q R ALR F G+ +LVAT VA
Sbjct: 245 QQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVRVLVATEVA 304
Query: 470 ARGLDIPHVRHVI 508
ARGLDI + +V+
Sbjct: 305 ARGLDIQGLEYVV 317
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N+DLP E+YVHRIGRTGR G GVA SF + D+ +L+
Sbjct: 318 NYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTLADIEKLI 363
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI++ +RQ L+FSATF ++ LA D L ++ + +T+
Sbjct: 162 DMGFSTDIQKILQAVNK----KRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAA 217
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQTCYNVHV 278
++Q V V++ KR L +L+ + V V
Sbjct: 218 TVSQVVYPVEQRRKRELLSELIGTKNWQQVLV 249
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF +TK D++ + L GY +HGD +Q +RE L +FR Q ILV T VAARG
Sbjct: 262 IVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQLRILVTTDVAARG 321
Query: 479 LDIPHVRHVI 508
+DI + HVI
Sbjct: 322 IDIDGLTHVI 331
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGE-RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTS 179
DMGF + +I++ +TGE ++T +FSAT PK+I +A+ F+ Y+ ++ + T+
Sbjct: 176 DMGFLDDVLEIIK-----RTGENKRTFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTT 230
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
EN Q VDE DK L +++
Sbjct: 231 ENAEQLYFEVDEKDKLPLLCRIID 254
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+ +P D E YVHRIGRTGR G G A +F
Sbjct: 332 NYSVPRDPEYYVHRIGRTGRAGKKGFAITF 361
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF TK GA+++ + L G ++IHG+++Q R AL F+ G+ ILVAT +AARG
Sbjct: 251 LVFSRTKHGANKITKQLEDAGIRASAIHGNKSQGARTRALADFKEGRIRILVATDIAARG 310
Query: 479 LDIPHVRHVI 508
LDI + HV+
Sbjct: 311 LDIEQLPHVV 320
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+KI+ +PK +RQ L+FSATF +I+ LA+ + N + ++V +T+
Sbjct: 165 DMGFIHDIKKILAI--LPK--KRQNLLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAV 220
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
++ Q + VD+ K L+ L+
Sbjct: 221 SVEQWLHPVDKKRKTELLIQLI 242
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NFDLP E+YVHRIGRTGR G G A S
Sbjct: 321 NFDLPDVAEDYVHRIGRTGRAGATGKAIS 349
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I+VFV K+ D + + GY ++HG + Q +RE AL R G T +LVAT +A R
Sbjct: 655 IIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGR 714
Query: 476 GLDIPHVRHVI 508
G+D+P V V+
Sbjct: 715 GIDVPDVSLVV 725
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEA 654
NF++ +++E Y HRIGRTGR G GVA +F + + + DL ++L+++
Sbjct: 726 NFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKS 774
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 15 EPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQ 194
E + + + H K RQT+M++AT P ++ +A+ +L + +G +G + + Q
Sbjct: 568 EAEDARAMSQHLGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQ 627
Query: 195 KVVWVDEMDKR-SFLLDLL 248
+V ++ DKR L D+L
Sbjct: 628 RVEFISGEDKRKKRLADIL 646
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/94 (37%), Positives = 51/94 (54%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
+L G +K L++ E+ + +++FV TK Q+ E L GY +++GD NQ R
Sbjct: 225 WLVHGISKHEALMRFLEVEKFEAVIIFVRTKSATLQISEILQRFGYNSAALNGDMNQSVR 284
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ R R G IL+ T VAARGLDI + VI
Sbjct: 285 CKTISRLRCGTLDILITTDVAARGLDINRISFVI 318
Score = 39.5 bits (88), Expect = 0.085
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P + YVHRIGRTGR G G + F
Sbjct: 319 NYDIPCNYNAYVHRIGRTGRAGRSGKSLLF 348
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK D L + L V ++HGDR Q R AL FR G+ P+LV T +A+RG
Sbjct: 264 IVFARTKNTVDALAKTLRRHNLRVETLHGDRTQGARNKALDLFRQGRIPVLVTTDIASRG 323
Query: 479 LDIPHVRHVI 508
LDIP V VI
Sbjct: 324 LDIPDVDLVI 333
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N D+P E YVHRIGRT R G GVA S N R RD+
Sbjct: 334 NMDMPETPEAYVHRIGRTARAGRKGVAFSLINIDERTFLRDV 375
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+D P+ +E+YVHR+GRTGR G G A +F ++ A DLV+ L E+KQ+VP
Sbjct: 413 NYDTPNHLEDYVHRVGRTGRAGQKGTAVTFISEDEEKFAPDLVKALKESKQNVP 466
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQI +I+ + P +RQT+MFSATFP ++ LA+ L N + + +G +
Sbjct: 281 DMGFEPQITRIL-ANLRP---DRQTVMFSATFPHTMEALARAALDNPIEIQIGGKSVVNS 336
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+I Q V E D+ +L+LL
Sbjct: 337 DIEQLVELRPEEDRFLRVLELL 358
Score = 33.5 bits (73), Expect = 5.6
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
L RPEED+ + V + L E+ Y +G + + + + F++
Sbjct: 341 LVELRPEEDRFLRVL-------ELLGEW-YERGKIIIFVASQ--DKADSTTISDFKSDVC 390
Query: 443 PILVATAVAARGLDIPHVRHVI 508
ILVAT+VAARGLD+ +R VI
Sbjct: 391 NILVATSVAARGLDVKDLRLVI 412
>UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2;
Cryptosporidium|Rep: ATP-dependent RNA helicase -
Cryptosporidium hominis
Length = 499
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK+ L L GY VT +H NQR R +L +FR+ + +LVAT VAARG
Sbjct: 317 IIFTATKQQCQMLTSCLEIMGYSVTGLHSLMNQRRRLASLGKFRSKTSKLLVATGVAARG 376
Query: 479 LDIPHVRHVI 508
LDIP V VI
Sbjct: 377 LDIPDVEFVI 386
Score = 40.7 bits (91), Expect = 0.037
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N+D P E+Y+HRIGR GR G++ +F +
Sbjct: 387 NYDFPRSFEDYIHRIGRVGRANKTGISLTFVTE 419
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K + + EYL +G V++IHG +Q ER +++ F+ + +L+ T VA++
Sbjct: 443 VLIFCENKADVEIINEYLILKGVEVSAIHGGLSQEERMESISDFKNHKKDVLIGTDVASK 502
Query: 476 GLDIPHVRHVI 508
GLD P + HVI
Sbjct: 503 GLDFPSIHHVI 513
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF--NDTNRGLARDLVELLVEAKQDVPNWL 678
NFDLP DVE YVHRIGRTGR G G+AT+ ++ N L +L +L+E+++++P +L
Sbjct: 514 NFDLPRDVENYVHRIGRTGRRGERGLATTLLDGSEDNNSLG-NLKSILIESEEEIPEFL 571
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GF+ +I I H + QTL+FSAT +IQ A+ L N + + VG GS ++
Sbjct: 359 DLGFDTEINGIFN-HF---NNQHQTLLFSATMSIKIQEFAKSALTNPILVNVGLPGSPNK 414
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+ Q ++ V + K LL L
Sbjct: 415 NVKQLLILVPKESKLPMLLQCL 436
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 64.1 bits (149), Expect = 3e-09
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYL-YSQGYPVTSIHGDRNQRE 403
F+ G+ K + + R Q +LVFV+TKK D L++ L + V +IHGD+ Q
Sbjct: 370 FVVEGYHKEEKMEEILRQVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLAIHGDKLQSS 429
Query: 404 REDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
R+ L RFR + ILVAT VAARGLDI + V+
Sbjct: 430 RDYVLDRFRKDERAILVATDVAARGLDIKDLDVVV 464
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVG 161
DMGFE QIRKI C + +T +RQTLMFSAT+P++I+ LA F ++V + +G
Sbjct: 307 DMGFEDQIRKI--CSQI-RT-DRQTLMFSATWPREIRNLAASFQKDFVRVHIG 355
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 LLQRARPEED-QLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTG 436
LL R D L LVF TK+ D+L +L +GY +HGD Q +R+ + +F+ G
Sbjct: 233 LLSRLLDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKG 292
Query: 437 QTPILVATAVAARGLDIPHVRHV 505
ILVAT VAARG+D+ V V
Sbjct: 293 NIEILVATDVAARGIDVGGVEAV 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
NFD+P+D E YVHRIGRTGR G G A SF + RD+
Sbjct: 317 NFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDI 358
Score = 42.7 bits (96), Expect = 0.009
Identities = 32/83 (38%), Positives = 44/83 (53%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I I+E +P ERQ L+FSAT P++I LAQ + N + V + T+
Sbjct: 161 DMGFREDIEYILE--DIPY--ERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTP 216
Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
++ QK V E K L LL+
Sbjct: 217 DVEQKYFEVKEDMKLELLSRLLD 239
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
L+F +TK D++ L +GY +HGD Q +RE L +F+ + +LVAT VAARG
Sbjct: 245 LIFCKTKADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKFKGRKINVLVATDVAARG 304
Query: 479 LDIPHVRHVI 508
+DI + HV+
Sbjct: 305 IDINDLTHVV 314
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D+P + E YVHRIGRTGR G G A +F
Sbjct: 315 NYDIPQNPESYVHRIGRTGRAGKQGYAVTF 344
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF + +I++ + E++ L+FSAT P I LA++++ Y + V R T+
Sbjct: 159 NMGFIDDVEEILKSVST----EKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTT 214
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQ 257
Q + DK L +++ +
Sbjct: 215 LTDQSFYEIHSRDKFELLSRIIDLE 239
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I+VFV KK AD + +Y+ G ++H ++Q +RE AL+ R G+ +LVAT +A R
Sbjct: 587 IIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGR 646
Query: 476 GLDIPHVRHVI 508
G+D+P V VI
Sbjct: 647 GIDVPDVSLVI 657
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+ + +E+YVHRIGRTGR G GVA +F + + + DL
Sbjct: 658 NWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDL 699
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 GERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWV-DEMDKRSFLL 239
G R T +FSAT P ++ LA+ +L + +G G + + Q+V +V + K++ L+
Sbjct: 516 GWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLI 575
Query: 240 DLL 248
++L
Sbjct: 576 EIL 578
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +2
Query: 239 GFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDAL 418
G K L++ E+ ++FV TK ++ E L GY +++GD NQ RE L
Sbjct: 229 GMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTL 288
Query: 419 RRFRTGQTPILVATAVAARGLDIPHVRHVI 508
R + G+ IL+AT VAARGLD+ + V+
Sbjct: 289 ERLKDGRLDILIATDVAARGLDVERISLVV 318
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
N+D+P D E YVHRIGRTGR G G A F + R L R++
Sbjct: 319 NYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/70 (35%), Positives = 49/70 (70%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F+ T++ D L E ++++ + V+++HGD +Q+ER+ +R FR+G + +L+ T + ARG
Sbjct: 236 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 295
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 296 IDVQQVSLVI 305
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR GR G GVA +F + ++ + RD+ +++P
Sbjct: 306 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRVLRDIETFYNTTVEEMP 359
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T+K ++ + L +GY S+HG+ +Q +R+ +++FR +LVAT VAARG
Sbjct: 246 IIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDVAARG 305
Query: 479 LDIPHVRHVI 508
LD+ + HVI
Sbjct: 306 LDVDDLTHVI 315
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N+ LP D E Y HR GRTGR G G + + N +G R++ ++
Sbjct: 316 NYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKLREIERII 361
Score = 41.5 bits (93), Expect = 0.021
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
+MGF I I+ +PK ER TL+FSAT +I +++++L N + +GR ++
Sbjct: 160 NMGFTDSINAILA--DVPK--ERNTLLFSATMSPEIARISKNYLQNAKEITIGRKNESTS 215
Query: 183 NITQKVVWVDEMDKRSFL 236
N+ V DK + L
Sbjct: 216 NVKHVAYTVQAKDKYAAL 233
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 63.7 bits (148), Expect = 5e-09
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +2
Query: 212 RNGQAFLFIGFT--KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHG 385
R Q+ +F+ + K L Q P Q + VF K A+ + +L G ++HG
Sbjct: 224 RIAQSVMFLNASDKKAALLAQLRTPGIGQAV-VFTLQKNIANDVCTFLTESGITAEALHG 282
Query: 386 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+R+Q +RE AL FR G +LVAT +AARG+D+ V HVI
Sbjct: 283 NRSQGQRERALNAFREGDVQVLVATDIAARGIDVDTVTHVI 323
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I +IV T+P+ +R T++FSAT PK I L + L N + + ST +
Sbjct: 168 DMGFAKPIERIVA--TLPE--DRHTVLFSATMPKSIAALVESLLRNPAKVEIAPPSSTVD 223
Query: 183 NITQKVVWVDEMDKRSFLL 239
I Q V++++ DK++ LL
Sbjct: 224 RIAQSVMFLNASDKKAALL 242
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
N DLPS E YVHRIGRTGR G G A + + R
Sbjct: 324 NHDLPSLPESYVHRIGRTGRAGRSGFAITLCDAEQR 359
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L LVF TK+ D+L ++L QG V IHG +RER+ LR+ GQ +VA+ +AA
Sbjct: 246 LALVFANTKQKVDELTKFLQDQGLKVAKIHGGVTERERKRTLRQVEQGQYQYVVASDLAA 305
Query: 473 RGLDIPHVRHVI 508
RGLDI V V+
Sbjct: 306 RGLDIDGVSLVV 317
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVEL 642
N+++P D+E +HRIGRTGR G G A + + DL ++
Sbjct: 318 NYEIPRDIEFVIHRIGRTGRNGLSGHAVTLIREEEMNRIEDLEKM 362
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/87 (39%), Positives = 45/87 (51%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
KC L E L+F TK+GAD L + + G + H D +Q RE L F
Sbjct: 240 KCAMLCHLITQESWLQSLIFSRTKQGADALVKQMKQAGVAAEAFHADLSQAVREQVLAAF 299
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
+ G+ LVAT VAARGLDI + +V+
Sbjct: 300 KAGEVTALVATDVAARGLDINELNYVV 326
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N +LP VE+YVHRIGRTGR G G A + + + L L L
Sbjct: 327 NMELPFQVEDYVHRIGRTGRAGKAGQAITLLSIDDEPLLTKLEAFL 372
Score = 39.5 bits (88), Expect = 0.085
Identities = 25/86 (29%), Positives = 49/86 (56%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF+ +I ++++ +P T RQTL+FSAT ++ ++ L + + V + +T+
Sbjct: 171 DMGFKDEIVEVLK--RLPST--RQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTAS 226
Query: 183 NITQKVVWVDEMDKRSFLLDLLNAQT 260
+I ++V VD K + L L+ ++
Sbjct: 227 SIVERVFNVDANRKCAMLCHLITQES 252
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGST-S 179
DMGF PQI +++ +PK ERQTLMFSAT+PK+++LLA FL + + + VG T S
Sbjct: 270 DMGFMPQIESLID--QIPK--ERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGS 325
Query: 180 ENITQKVVWVDEM 218
N+TQ +V +D++
Sbjct: 326 INVTQHIVNIDDL 338
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+ LP ++E+YVHRIGRTGR G G A S+ L RDLV++L Q +P++L
Sbjct: 435 NYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVTTQTPNL-RDLVKILQRTNQKIPDFLEKF 493
Query: 688 A 690
A
Sbjct: 494 A 494
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQ-GYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
++VF K D + YL +Q +H ++QR RE L+ FR + IL+AT VAA
Sbjct: 363 VIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAA 422
Query: 473 RGLDIPHVRHV 505
RGLDIP V+ V
Sbjct: 423 RGLDIPSVKAV 433
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK + L+ + Y +I GD +Q RE ++ RFRT + ILVAT VAARG
Sbjct: 243 IVFCSTKYRTRDVARMLHKRNYGAVAIEGDMSQHRREQSMSRFRTAKAQILVATDVAARG 302
Query: 479 LDIPHVRHVI 508
+D+P V V+
Sbjct: 303 IDVPRVALVV 312
Score = 34.3 bits (75), Expect = 3.2
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF I+ I++ E+ +FSAT P +I L++++L N + + E
Sbjct: 157 DMGFIDDIQFILDL----TPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDADDLSGE 212
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
I Q + + + +K +L+D +
Sbjct: 213 GIDQSYLVIRDREKMDYLVDFI 234
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+LVF K D++E L + V ++HGD++Q R + L++F++G +L+AT VAAR
Sbjct: 476 VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAAR 535
Query: 476 GLDIPHVRHVI 508
GLDI ++ V+
Sbjct: 536 GLDIKSLKTVV 546
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D+GFEPQ+R IV P +RQTL+FSAT P +++ LA++ L + + + VG VG +E
Sbjct: 389 DLGFEPQVRSIVG-QIRP---DRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANE 444
Query: 183 NITQKV-VWVDEMDKRSFLLDLL 248
+ITQ V V + +K +LL+ L
Sbjct: 445 DITQVVNVIPSDAEKLPWLLEKL 467
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNL-GVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+ D++ +VHRIGRTGR G+ GVA + A +LV LV A Q+VP LT
Sbjct: 547 NYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTD 606
Query: 685 TA 690
A
Sbjct: 607 LA 608
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/70 (35%), Positives = 49/70 (70%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F+ T++ D L E ++++ + V+++HGD +Q+ER+ +R FR+G + +L+ T + ARG
Sbjct: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 337 IDVQQVSLVI 346
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR GR G GVA +F + ++ + RD+ +++P
Sbjct: 347 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMP 400
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F +TKK D L + L + IHGD++QR+R+ + F+TG+ L+AT VA+RG
Sbjct: 463 IIFTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDKVMDLFKTGRVNTLIATDVASRG 522
Query: 479 LDIPHVRHVI 508
LD+ ++ VI
Sbjct: 523 LDVKDIKLVI 532
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRV-GST 176
DMGFEP IRKIV P +RQTLMFSAT+P+ ++ LA DF + + + + +G + +
Sbjct: 374 DMGFEPSIRKIVG-QIRP---DRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNV 429
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNAQT 260
+ +I Q+V +D+ K + ++L+ T
Sbjct: 430 NNDIDQQVEIIDKSQKYDRVKEILSTMT 457
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND-TNRGLARDLVELLVEAKQDV 666
N+D P +E+YVHR+GRTGR G G A SF + ++ ++++LV++L + Q++
Sbjct: 533 NYDFPKQIEDYVHRVGRTGRAGAQGKAISFLDQYEDKKISKELVDVLKQNNQEI 586
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,746,000
Number of Sequences: 1657284
Number of extensions: 12840554
Number of successful extensions: 38958
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 35810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38760
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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