Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20931
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 4e-37
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 77 2e-14
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 77 2e-14
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 66 2e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 60 2e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 59 3e-09
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 58 1e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 58 1e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 58 1e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 56 2e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 56 4e-08
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 51 1e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 46 4e-05
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 46 4e-05
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 44 2e-04
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 43 3e-04
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 43 3e-04
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 42 5e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 40 0.002
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 38 0.006
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 38 0.011
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 37 0.015
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 37 0.020
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 36 0.026
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.034
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 35 0.060
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 34 0.14
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.32
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 32 0.56
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_58790| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 29 5.2
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 29 5.2
SB_56071| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_15071| Best HMM Match : XAP5 (HMM E-Value=3.3) 28 6.9
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 151 bits (367), Expect = 4e-37
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR+IV+ +MPKTG RQTLMFSATFPK+IQ+LA+DFL NY+FLAVG+VGSTSE
Sbjct: 1013 DMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVGSTSE 1072
Query: 183 NITQKVVWVDEMDKRSFLLDLLNA 254
NITQKVVWVDE DKRSFLLDLLNA
Sbjct: 1073 NITQKVVWVDEFDKRSFLLDLLNA 1096
Score = 118 bits (283), Expect = 7e-27
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 257 NLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTG 436
+LL + P+ QL LVFVETKKGAD LE +L GY TSIHGDR+QRERE+ALR FR G
Sbjct: 1092 DLLNASGPQ--QLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCG 1149
Query: 437 QTPILVATAVAARGLDIPHVRHVI 508
TPILVATAVAARGLDIP+V+HVI
Sbjct: 1150 DTPILVATAVAARGLDIPNVKHVI 1173
Score = 94.7 bits (225), Expect = 7e-20
Identities = 38/61 (62%), Positives = 54/61 (88%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFDLP+D+EEYVHRIGRTGR+G+ G+ATSFFN N+ +A++L+++L E+KQ++P+WL S
Sbjct: 1174 NFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELMDILEESKQEIPSWLESM 1233
Query: 688 A 690
A
Sbjct: 1234 A 1234
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEP IR+IVE MP ERQTLMFSATFP++IQ LA DFL +Y+FL VGRVG T+
Sbjct: 876 DMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVGGTTS 935
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+I Q V+ V + +KR L +L
Sbjct: 936 DIEQTVIEVTDNEKRDRLTQIL 957
Score = 92.7 bits (220), Expect = 3e-19
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVFVE+K+ AD L +L +G+P TSIHGDR Q+ERE+AL FR G+ P+L+AT VAARG
Sbjct: 966 LVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARG 1025
Query: 479 LDIPHVRHVI 508
LDI V+HVI
Sbjct: 1026 LDIDDVKHVI 1035
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NDTNRGLARDLVELLVEAKQDVPNWLTS 684
NFDLPSD++EYVHRIGRTGR+GN G AT+FF + +AR LV++L EA Q+VP WL
Sbjct: 1036 NFDLPSDIDEYVHRIGRTGRIGNKGKATTFFLRGRDDKVARGLVKVLSEANQEVPEWLEE 1095
Query: 685 TA 690
A
Sbjct: 1096 IA 1097
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 84.6 bits (200), Expect = 8e-17
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
D+GF P I K++E M RQTLMFSATFP +IQ LA FL +Y+FLAVGRVG T+
Sbjct: 640 DLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVGGTN 699
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNA 254
+ITQ V+ V+ +KR L ++L+A
Sbjct: 700 LDITQHVITVNGSEKRDKLHEILSA 724
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSI 379
E LVFVE K+ AD L +L +P TSI
Sbjct: 756 ESTDRTLVFVELKRVADFLAAWLSQNNFPTTSI 788
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K D + EYL +G +IHGD++Q ER A+R F G +LVAT VA++
Sbjct: 90 VLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASK 149
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 150 GLDFPDIQHVI 160
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +R I +RQTL+FSAT PK+IQ A+ L V + VGR G+ S
Sbjct: 30 DMGFEEDVRTIFSYFK----SQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASL 85
Query: 183 NITQKVVWVDE 215
++ Q +++ ++
Sbjct: 86 DVIQVLIFAEK 96
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+F E K D + EYL +G +IHGD++Q ER A+R F G +LVAT VA++
Sbjct: 90 VLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASK 149
Query: 476 GLDIPHVRHVI 508
GLD P ++HVI
Sbjct: 150 GLDFPDIQHVI 160
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +R I +RQTL+FSAT PK+IQ A+ L V + VGR G+ S
Sbjct: 30 DMGFEEDVRTIFSYFK----SQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASL 85
Query: 183 NITQKVVWVDE 215
++ Q +++ ++
Sbjct: 86 DVIQVLIFAEK 96
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFEPQIR I++ P +RQTLM+SAT+PK++Q LA DFL +YV + VG +G T+
Sbjct: 220 DMGFEPQIRTIID-QIRP---DRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTAN 275
Query: 183 NITQKVVWVDE 215
+ ++V V E
Sbjct: 276 HKILQIVDVCE 286
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
NFD P+ E+YVHRIGRT R G + +FF N A++LV +L EAKQ V
Sbjct: 360 NFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQHV 412
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK+ D L E + + V S+HGD Q+ERE ++ FR GQ+ +L++T V ARG
Sbjct: 240 VIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARG 299
Query: 479 LDIPHVRHVI 508
LD+ V VI
Sbjct: 300 LDVQQVSLVI 309
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR+GR G GVA +F + + RD+ + ++P
Sbjct: 310 NYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 363
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 61.3 bits (142), Expect = 8e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P +E+YVHR+GRTGR G G + +F + + A L++++V+A Q+VP++L
Sbjct: 116 NYDFPRHIEDYVHRVGRTGRAGRSGTSLTFISREDWRSAHKLIKIMVQANQEVPDFLHDM 175
Query: 688 A 690
A
Sbjct: 176 A 176
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 395 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
Q +RE AL F+TG IL+AT VA+RGLDI + +VI
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVI 115
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVG 161
MGFEP+I+KI+ + +RQT+M SAT+P +Q +A ++ + V + VG
Sbjct: 1 MGFEPEIKKIL----LDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVG 48
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +2
Query: 242 FTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+ K LL+ R ++VF + + D + E L + + + +H ++ Q R ++
Sbjct: 317 YQKPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVK 376
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
FR G+ ILVAT VA+RGLD P V HVI
Sbjct: 377 AFRDGKVDILVATDVASRGLDFPEVTHVI 405
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP +E Y+HR GRTGR+G+ G+ATSF + +A +L E+L +Q +P L
Sbjct: 406 NYDLPDTIECYIHRCGRTGRIGHHGIATSFLT-LDCKIAEELKEMLEVMEQPIPKEL 461
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
MG E Q+RKIV T RQTL++SAT P+ ++ LA+ + N + + VG G + +
Sbjct: 248 MGMEEQLRKIVGLATGTSRA-RQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIAPS 306
Query: 186 ITQKVVWVDEMDKRSFLLDLL 248
+ Q VV++ K LL+ L
Sbjct: 307 VQQNVVFLYHYQKPQKLLETL 327
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +2
Query: 281 EEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
+++Q ++VF T K L + G +H +Q ER AL RF++G ILVAT
Sbjct: 245 DDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVAT 304
Query: 461 AVAARGLDIPHVRHVI 508
VA+RGLDIP V V+
Sbjct: 305 DVASRGLDIPQVELVV 320
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N ++P+D ++Y+HR+GRT R G G+A S
Sbjct: 321 NSNIPADPKDYIHRVGRTARAGRGGMAIS 349
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FV++K A +L L G V IH DR Q +R++ ++ FRTG+ +L+AT + R
Sbjct: 386 VLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGR 445
Query: 476 GLDIPHVRHVI 508
G+D V VI
Sbjct: 446 GIDFKGVNLVI 456
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFD+P EEYVH+IGR GR+G G + SF N+ ++GL L+ L +P+ LT +
Sbjct: 402 NFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKLQPMGVKLPDELTRS 461
Query: 688 A 690
A
Sbjct: 462 A 462
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSEN 185
+GFE Q+++I+E + RQT++FSAT P I+ +A L VF++ G ++
Sbjct: 294 LGFEQQVQQILE----RLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTKA 349
Query: 186 ITQKVVWVDEMDKRSFLLDLLNAQTCYN 269
+ Q ++WV+E K+ L +L +N
Sbjct: 350 VKQLILWVEEKSKKKQLFSILKDSRHFN 377
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/70 (34%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T++ D L + + + V+S+HGD +Q+ER+ ++ FR+G + +L+ T + ARG
Sbjct: 334 VIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARG 393
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 394 IDVHQVSLVI 403
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF++TK A +L L G +HG+ Q +R +AL++F+ G+ ILVAT +AARG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 479 LDIPHVRH 502
LDI V++
Sbjct: 72 LDITGVKN 79
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDV 666
N+D+ +E+Y HRIGRTGR G G+A SF ++ G+ DL +LL+ + + V
Sbjct: 358 NYDMAKTIEDYTHRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLLLSSPRHV 410
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +2
Query: 344 YLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
++ + + T++HG RNQ +RE AL + G ILVAT VA RG+DI V HVI
Sbjct: 303 FVNQKKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVI 357
Score = 34.7 bits (76), Expect = 0.080
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 20/64 (31%)
Frame = +3
Query: 3 DMGFEPQIRKIVEC-----------------HTMPKTGE---RQTLMFSATFPKQIQLLA 122
DMGFEP+++KI+E H + G+ RQT+MF+AT P Q++ LA
Sbjct: 221 DMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERLA 280
Query: 123 QDFL 134
+++L
Sbjct: 281 KNYL 284
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 LVFVETKKGADQLE-EYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++F +TKK A++L + Q V +HGD Q++RE L+ FR G+ LVAT VAAR
Sbjct: 309 MIFAQTKKEANELALNSVLKQETQV--LHGDIPQKQREVTLKSFREGKFRCLVATDVAAR 366
Query: 476 GLDIPHVRHVI 508
GLDIP + V+
Sbjct: 367 GLDIPEIDLVV 377
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 520 PSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGL 621
P DV+ Y+HR GRTGR G G+ F+ GL
Sbjct: 382 PKDVDAYIHRSGRTGRAGREGICIVFYKPQQEGL 415
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF T++ A L E + +G+ V + G+ +R L RFR G+ +L+ T V+ARG
Sbjct: 348 VVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARG 407
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 408 IDVEQVTLVI 417
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Frame = +1
Query: 508 NFDLPSDV------EEYVHRIGRTGRMGNLGVATSFFN 603
N+D+P D+ E Y+HRIGRTGR G G+A +F +
Sbjct: 418 NYDMPMDMQGKADFETYLHRIGRTGRFGKSGIAVNFID 455
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 QTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQ-KVVWVDEMDKRSFLLDL 245
Q L+FSAT+ + + A+ + N + + + R + +NI Q VV + DK L ++
Sbjct: 280 QVLLFSATYDEDVMKFAETVVPNPIIIRLRREEESLDNIKQYYVVCKNSEDKFEALCNM 338
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF T +L L +H QR+R L RF+ T +L+AT VAARG
Sbjct: 460 LVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARG 519
Query: 479 LDIPHVRHVI 508
LDI ++ HVI
Sbjct: 520 LDIANIEHVI 529
Score = 31.1 bits (67), Expect = 0.98
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
++ +P D E YVHR GRT R + G++
Sbjct: 530 HYQVPKDPEVYVHRSGRTARASHEGLS 556
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTG----ERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG 170
DMGFEPQI KI M +RQT+MFSATFP+Q++ LA+ L + + VG
Sbjct: 235 DMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRS 294
Query: 171 STSENITQKV 200
++ Q V
Sbjct: 295 VVCSDVEQNV 304
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
+L+FV K +++L L + V +HGD +Q ER L +F+ + PILVAT VA
Sbjct: 732 VLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 78 LMFSATFPKQIQLLAQDFLYNYVFLAVGRVG 170
L+FSATF K+++ L +D L + V + +G +G
Sbjct: 683 LLFSATFKKKVEHLCRDILVDPVRVVIGELG 713
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF + E L PV IHG + Q++R F ++ IL+ T VAAR
Sbjct: 821 VMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAAR 880
Query: 476 GLDIPHVRHVI 508
GLDIP V ++
Sbjct: 881 GLDIPEVDWIV 891
Score = 31.9 bits (69), Expect = 0.56
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYN---YVFLAVGRVGS 173
++GFE ++R+I+ +P +RQT++FSAT K ++ LA+ L YV + + S
Sbjct: 733 EIGFEEEMRQIIRI--LPS--KRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETS 788
Query: 174 TSENITQKVVWVDEMDKRSFLL 239
T E + Q + V +KR +L
Sbjct: 789 TVEGLEQGYIVVPS-EKRFLVL 809
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGR 567
+D D +EY+HR+GRT R
Sbjct: 893 YDPADDPKEYIHRVGRTAR 911
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 17 NFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 52
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 17 NFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 52
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 365 NFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 400
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F + + + L + G+ IH +Q R FR G LV + + RG
Sbjct: 295 IIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRG 354
Query: 479 LDIPHVRHVI 508
+DI V VI
Sbjct: 355 IDIQSVNVVI 364
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
NFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 365 NFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 400
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F + + + L + G+ IH +Q R FR G LV + + RG
Sbjct: 295 IIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRG 354
Query: 479 LDIPHVRHVI 508
+DI V VI
Sbjct: 355 IDIQSVNVVI 364
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++FV++ + L L Q +P IH Q ER ++F+ + +LVAT + R
Sbjct: 338 VIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGR 397
Query: 476 GLDIPHVRHV 505
G+DI V V
Sbjct: 398 GMDIERVNIV 407
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N+D+P D + Y+HR+ R GR G G+A +F +D
Sbjct: 409 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD 441
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGF IR+++ +P +RQ L+FSATF I+ LA+ L+N + + V R + S+
Sbjct: 17 DMGFIHDIRRVLT--KLP--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD 72
Query: 183 NITQK 197
+ Q+
Sbjct: 73 QVLQQ 77
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N+D+P D + Y+HR+ R GR G G+A +F +D
Sbjct: 36 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD 68
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Frame = +2
Query: 200 CLGRRNGQAFLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPV--- 370
CLG + F F+ + T+ + + +++ ++FV ++ A +L E L +GY V
Sbjct: 528 CLGIKQKDKFQFL-LEELTSFTDKTKQDDNSRGIIFVRMRRTAYKLCERL--KGYDVISE 584
Query: 371 ----TSI--HGDRNQR----EREDALRRFRTGQTPILVATAVAARGLDIP 490
T+I HG + E+E L+ FRTG+ +L++T+V GLD+P
Sbjct: 585 YLNPTAIVGHGGGDGMSWYGEQEVILKSFRTGRIKLLISTSVLEEGLDVP 634
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NDTNRGLARDLVELLVEAKQDV 666
N D+P + E Y+HRIGR GR G G+A ++ N RD +E ++ K ++
Sbjct: 288 NMDVPHNGETYLHRIGRAGRFGTEGMAVTYVANGKEERELRD-IERSIDVKMEL 340
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = +2
Query: 293 LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
L+ + V+TK ++QL+ L S G + ++ +Q R + +F+ +T ++V T VAA
Sbjct: 479 LVRLDVDTKL-SEQLK-MLLSGGIDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAA 536
Query: 473 RGLDIPHVRHVI 508
RG+DIP + +VI
Sbjct: 537 RGIDIPMLDNVI 548
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
NF P + +VHR+GR R G G A S
Sbjct: 549 NFHFPPKAKLFVHRVGRVARAGRSGTAYS 577
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 383 GDRNQREREDALRRFRTG-QTPILVATAVAARGLDIPHVRHVI 508
G QRE+E+ + +FR G + I++AT VA GLDI +VI
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVI 639
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQ 439
+L++ R E+ +L+F + + D LE++L GY I G N R++A+ RF
Sbjct: 969 MLKKLR-EQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPT 1027
Query: 440 T-PILVATAVAARGLDIPHVRHVIILIYHLTW 532
+ + A GL I + IY W
Sbjct: 1028 SQAFCFLLSTRAGGLGINLATADTVFIYDSDW 1059
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
IL+F + K D L++Y Y +GY + + G +R + + F + + + A
Sbjct: 1216 ILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASDPEKFIFLLSTRAG 1275
Query: 476 GLDIPHVRHVIILIYHLTWKNTS 544
GL + ++IY W S
Sbjct: 1276 GLGLNLSAADTVIIYDSDWNPQS 1298
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 37.5 bits (83), Expect = 0.011
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNL 579
NFD P+ + +Y+HR+GRTGR+ ++
Sbjct: 770 NFDFPNSMVDYIHRVGRTGRVSHV 793
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 371 TSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
T G+ R R + +F+ ILV T +A+RGLD V HVI
Sbjct: 724 TKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVI 769
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYV 146
DMGF P + I+E +P ERQTL++SAT + ++ LA+ L +YV
Sbjct: 210 DMGFAPTLNAIIE--NLPS--ERQTLLYSATQTRSVKDLARLSLQSYV 253
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYL--YSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
ILVFV + K + E G P+ +++G + Q +R F +L AT +A
Sbjct: 276 ILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIA 335
Query: 470 ARGL 481
ARGL
Sbjct: 336 ARGL 339
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF 600
+F +PS+VE YV IGR GR G L AT ++
Sbjct: 335 HFGIPSEVEHYVQEIGRGGRDGRLCYATLYY 365
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 36.3 bits (80), Expect = 0.026
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYL--YSQGYPVTSIHGDRNQREREDALR 421
K + L+ + +D+ +VF T + + L + + ++HG + + R
Sbjct: 76 KFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALHG-KMKSNRHKIFD 134
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
FR ++ ILV T V ARG+DIP V VI
Sbjct: 135 SFRKLESGILVCTDVMARGVDIPEVNWVI 163
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDT 609
+D PS +VHR GRT R+GN G A F T
Sbjct: 165 YDPPSSANAFVHRCGRTARIGNEGNAVVFLLPT 197
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 514 DLPSDVEEYVHRIGRTGRMGNLGVATS 594
++P +VEEY+H GR GR G G AT+
Sbjct: 504 EVPKNVEEYLHLCGRVGRQGRPGTATT 530
Score = 35.5 bits (78), Expect = 0.046
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 416 LRRFRTGQTPILVATAVAARGLDIPHVRHVIIL 514
LR FRTGQ +LV T RGLD + HV ++
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLM 503
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/95 (22%), Positives = 40/95 (42%)
Frame = +2
Query: 257 NLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTG 436
NLL+R + + + +L+F + + D LE++L GY + G +R+ + RF
Sbjct: 1429 NLLRRLKAGKHR-VLIFTQMTRMLDVLEKFLNYHGYVYLRLDGSTRVEQRQILMDRFNAD 1487
Query: 437 QTPILVATAVAARGLDIPHVRHVIILIYHLTWKNT 541
+ + GL + ++ Y W T
Sbjct: 1488 SRIFCFILSTRSGGLGVNLTGADTVVFYDSDWNPT 1522
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 34.7 bits (76), Expect = 0.080
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF 600
++ +PS+VE YV IGR GR G L AT ++
Sbjct: 13 HYGIPSEVEHYVQEIGRGGRDGRLCHATLYY 43
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 392 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+Q+E+E + F+ G IL+AT+VA GLDI VI
Sbjct: 983 SQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVI 1021
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 401 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
++E L+ FR Q +LVAT+V GLD+P V+
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVV 167
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 532 EEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
E+Y+HR+GRT R G G + +F + L + + L+ + P
Sbjct: 127 EDYIHRVGRTARAGRSGRSVTFVTQYDVELYQRIEHLIAKKLPQYP 172
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 392 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVIILIYH 523
+Q+E+ + + RFR G LV+T V GLDI V ++ H
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAH 608
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 514 DLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDL 633
D +D + +HR+GRT R G+ G +F + L L
Sbjct: 124 DFATDAAQMLHRVGRTARAGSHGKVVNFITKDDEELVNAL 163
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +2
Query: 203 LGRRNGQAFLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQ-GYPVTSI 379
L +NGQ GF + ++L+ + + L VF + K+ L+ L + V
Sbjct: 507 LAAKNGQG---TGFVRASDLISF---DYESLREVFEQLKRTHVGLDSVLMRTIPHAVAFH 560
Query: 380 HGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVII 511
H ER+ FR G +LVAT+ G+++P R VII
Sbjct: 561 HAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNLP-ARRVII 603
>SB_58790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 116 FGSGFLIQLCVPCCWTC 166
+G + +Q VPCCWTC
Sbjct: 644 YGGEYPVQGSVPCCWTC 660
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTP---ILVATAV 466
+L+F + LE+Y +G+P + G +R L F +P L++T
Sbjct: 532 VLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLLSLFNAKDSPYFVFLLSTRA 591
Query: 467 AARGLDIPHVRHVII 511
GL++ V+I
Sbjct: 592 GGLGLNLQAADTVVI 606
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 302 VFVETKKGADQLEEYLYSQGYPVTSI 379
V + T+ LE+Y+Y++GYP++S+
Sbjct: 433 VSIITEAPPPPLEQYVYTEGYPISSL 458
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 374 SIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
S H + +R +RF +G+ + AT GLD VR +I
Sbjct: 817 SYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAII 861
>SB_56071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 856
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 30 KIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNY-VFLAVGRVGSTSEN 185
K ++CH KTG T+ SA KQ+ + D ++ F +G V S SEN
Sbjct: 299 KNIQCHNCQKTGHFATVFQSA---KQVHEVYNDEDSDFDTFYTMGVVNSISEN 348
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 493 RTSRNNFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQ 660
++ NN D SD +EY + GR R+ G T++ + G +R + VE K+
Sbjct: 121 KSENNNTDSASD-DEYPAKTGRGFRVSCGGTPTNWARARDLGASRSKMAATVEVKE 175
>SB_15071| Best HMM Match : XAP5 (HMM E-Value=3.3)
Length = 412
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 466 RCKR-PRHTARTSRNNFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARD 630
RC R PR T+ T + +P +E+ G GR GVA + N GL ++
Sbjct: 313 RCSRVPRATSSTEHFHNTVPRREDEH-QPAGSDGRKAEEGVANQYGNPHGHGLRQE 367
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 520 PSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLV 636
P D+E Y IGR GR G F+ + +R L+
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGDFATSRYLI 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,354,708
Number of Sequences: 59808
Number of extensions: 429489
Number of successful extensions: 1402
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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