Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20931
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    86   9e-19
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   3.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 86.2 bits (204), Expect = 9e-19
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +2

Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
           LVFVETK+ AD L   +    +P TSIHGDR QRERE AL  F++G+  +L+AT+VAARG
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARG 486

Query: 479 LDIPHVRHVI 508
           LDI +V HV+
Sbjct: 487 LDIKNVNHVV 496



 Score = 81.0 bits (191), Expect = 4e-17
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = +3

Query: 3   DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
           DMGF P I K++   TMP+  +RQTLMFSATFP +IQ LA  FL+NY+ + VG VG    
Sbjct: 337 DMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACA 396

Query: 183 NITQKVVWVDEMDKRSFLLDLLN 251
           ++ Q +  V++  KR  L ++LN
Sbjct: 397 DVEQTIHLVEKFKKRKKLEEILN 419



 Score = 74.1 bits (174), Expect = 4e-15
 Identities = 32/58 (55%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +1

Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
           N+DLP  +++YVHRIGRTGR+GN G ATSF++ + +R +A DLV++L +A Q VP++L
Sbjct: 497 NYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQSVPDFL 554


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 48  TMPKTGERQTLMFSATFPKQIQLLAQD 128
           T P TG+++ L      P +  LLAQD
Sbjct: 471 TAPDTGDQEQLTDHIPAPDEFSLLAQD 497


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 68  TSNSYVFCHFPKTDSTFGSGFLIQLCV 148
           T+   +FCH+    STFG+  +I +C+
Sbjct: 842 TNRFRIFCHWLCNHSTFGN--IILVCI 866


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,586
Number of Sequences: 2352
Number of extensions: 14512
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)