Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20931
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 136 2e-32
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 115 4e-26
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 115 4e-26
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 115 4e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 78 8e-15
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 78 8e-15
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 78 8e-15
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 78 8e-15
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 78 8e-15
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 77 1e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 71 1e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 71 1e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 3e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 64 8e-11
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 64 8e-11
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 60 2e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 60 2e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 7e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 7e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 56 2e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 50 2e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 50 2e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 48 7e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 48 7e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 48 9e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 47 2e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 44 2e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 44 2e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 41 0.001
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 41 0.001
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 40 0.001
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.006
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 38 0.007
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 37 0.017
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 37 0.017
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.030
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 36 0.030
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 36 0.030
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.040
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 35 0.070
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 35 0.070
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 34 0.12
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 33 0.16
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 33 0.16
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 33 0.28
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 33 0.28
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.86
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 31 1.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 31 1.1
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z75954-3|CAB00108.1| 323|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 28 6.0
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 28 8.0
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 8.0
AF099920-10|AAO91710.1| 1051|Caenorhabditis elegans Transbilayer... 28 8.0
AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer ... 28 8.0
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 136 bits (328), Expect = 2e-32
Identities = 66/85 (77%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTS 179
DMGFEPQIR+IVEC+ MP ER T MFSATFPK+IQLLAQDFL NYVFLAVGRVGSTS
Sbjct: 339 DMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTS 398
Query: 180 ENITQKVVWVDEMDKRSFLLDLLNA 254
ENI QK+VWV+E +KRS+L+DLL+A
Sbjct: 399 ENIMQKIVWVEEDEKRSYLMDLLDA 423
Score = 102 bits (245), Expect = 2e-22
Identities = 42/63 (66%), Positives = 56/63 (88%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLPSDV+EYVHRIGRTGR+GN+G+ATSFFND NR +AR+L++L+VEA Q++P+WL
Sbjct: 501 NYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGM 560
Query: 688 AAD 696
+ D
Sbjct: 561 SGD 563
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/75 (65%), Positives = 54/75 (72%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATA 463
+ L LVFVETK+GA L YL Q Y V +IHGD Q ERE L FRTG PILVATA
Sbjct: 426 DSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATA 485
Query: 464 VAARGLDIPHVRHVI 508
VAARGLDIP+V+HVI
Sbjct: 486 VAARGLDIPNVKHVI 500
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 115 bits (276), Expect = 4e-26
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
DMGFEPQIRKIV PKT R T MFSATFPK+IQ+LA+DFL NY+FLAVGRVGSTS
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTA-RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTS 369
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
ENI Q+++WV+EM+KRS L+++L
Sbjct: 370 ENIEQRLLWVNEMEKRSNLMEIL 392
Score = 101 bits (241), Expect = 7e-22
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLP D +EYVHRIGRTGR GNLG+ATSFFND NRG+ RDL L+VE+ Q+VP WL
Sbjct: 472 NYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQV 531
Query: 688 AAD 696
AA+
Sbjct: 532 AAE 534
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQ-LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
K +NL++ E + L+LVFVETK+GA++L +L Q SIHGD Q ERE L
Sbjct: 384 KRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLEL 443
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR+GQ PILVATAVAARGLDIP+VRHVI
Sbjct: 444 FRSGQCPILVATAVAARGLDIPNVRHVI 471
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 115 bits (276), Expect = 4e-26
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
DMGFEPQIRKIV PKT R T MFSATFPK+IQ+LA+DFL NY+FLAVGRVGSTS
Sbjct: 295 DMGFEPQIRKIVGQGMPPKTA-RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTS 353
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
ENI Q+++WV+EM+KRS L+++L
Sbjct: 354 ENIEQRLLWVNEMEKRSNLMEIL 376
Score = 101 bits (241), Expect = 7e-22
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLP D +EYVHRIGRTGR GNLG+ATSFFND NRG+ RDL L+VE+ Q+VP WL
Sbjct: 456 NYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQV 515
Query: 688 AAD 696
AA+
Sbjct: 516 AAE 518
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQ-LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
K +NL++ E + L+LVFVETK+GA++L +L Q SIHGD Q ERE L
Sbjct: 368 KRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLEL 427
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR+GQ PILVATAVAARGLDIP+VRHVI
Sbjct: 428 FRSGQCPILVATAVAARGLDIPNVRHVI 455
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 115 bits (276), Expect = 4e-26
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLY-NYVFLAVGRVGSTS 179
DMGFEPQIRKIV PKT R T MFSATFPK+IQ+LA+DFL NY+FLAVGRVGSTS
Sbjct: 292 DMGFEPQIRKIVGQGMPPKTA-RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTS 350
Query: 180 ENITQKVVWVDEMDKRSFLLDLL 248
ENI Q+++WV+EM+KRS L+++L
Sbjct: 351 ENIEQRLLWVNEMEKRSNLMEIL 373
Score = 101 bits (241), Expect = 7e-22
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+DLP D +EYVHRIGRTGR GNLG+ATSFFND NRG+ RDL L+VE+ Q+VP WL
Sbjct: 453 NYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQV 512
Query: 688 AAD 696
AA+
Sbjct: 513 AAE 515
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQ-LILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRR 424
K +NL++ E + L+LVFVETK+GA++L +L Q SIHGD Q ERE L
Sbjct: 365 KRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLEL 424
Query: 425 FRTGQTPILVATAVAARGLDIPHVRHVI 508
FR+GQ PILVATAVAARGLDIP+VRHVI
Sbjct: 425 FRSGQCPILVATAVAARGLDIPNVRHVI 452
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/87 (43%), Positives = 57/87 (65%)
Frame = +2
Query: 248 KCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF 427
K LL +++ ++FVETK+ AD+L + G+P IHGD+NQ ER+ L+ F
Sbjct: 363 KLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEF 422
Query: 428 RTGQTPILVATAVAARGLDIPHVRHVI 508
+ G+TPI++AT VAARGLD+ ++ VI
Sbjct: 423 KAGKTPIMLATDVAARGLDVDDIKFVI 449
Score = 70.9 bits (166), Expect = 9e-13
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVG-STS 179
DMGFEPQI+KI+ P +RQTLMFSAT+PK+++ LA DF + FL VG + + +
Sbjct: 290 DMGFEPQIKKIIG-QIRP---DRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
Query: 180 ENITQKVVWVDEMDKRSFLLDLLN 251
NITQ V ++E K++ L++LLN
Sbjct: 346 HNITQVVDILEEHAKQAKLMELLN 369
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P++ E+YVHRIGRTGR G A +FF TN A+DL+++L EAKQ VP L
Sbjct: 450 NYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDM 509
Query: 688 A 690
A
Sbjct: 510 A 510
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 77.8 bits (183), Expect = 8e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 610 MVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 670 LDIKGVDHVI 679
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A+Q VP+W+
Sbjct: 680 NYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSELVGVLADAQQIVPDWMQGA 738
Query: 688 A 690
A
Sbjct: 739 A 739
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MP+ RQTLMFSATFP +Q A+ FL NYV +A+ ++G+ ++
Sbjct: 508 MGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANK 567
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ + +K+ LL+LL
Sbjct: 568 CVLQEFERCERSEKKDKLLELL 589
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 77.8 bits (183), Expect = 8e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 881 LDIKGVDHVI 890
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A Q VP W+
Sbjct: 891 NYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE-DCNLLSELVRVLSDADQLVPEWM 946
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MPK RQTLMFSATFP +Q A++ L Y+ LA+ ++G+ ++
Sbjct: 719 MGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANK 778
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D +K+ LL++L
Sbjct: 779 CVLQEFEKCDRSEKKDKLLEIL 800
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 77.8 bits (183), Expect = 8e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 881 LDIKGVDHVI 890
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A Q VP W+
Sbjct: 891 NYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE-DCNLLSELVRVLSDADQLVPEWM 946
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MPK RQTLMFSATFP +Q A++ L Y+ LA+ ++G+ ++
Sbjct: 719 MGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANK 778
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D +K+ LL++L
Sbjct: 779 CVLQEFEKCDRSEKKDKLLEIL 800
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 77.8 bits (183), Expect = 8e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 610 MVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 670 LDIKGVDHVI 679
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A+Q VP+W+
Sbjct: 680 NYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSELVGVLADAQQIVPDWMQGA 738
Query: 688 A 690
A
Sbjct: 739 A 739
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MP+ RQTLMFSATFP +Q A+ FL NYV +A+ ++G+ ++
Sbjct: 508 MGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANK 567
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ + +K+ LL+LL
Sbjct: 568 CVLQEFERCERSEKKDKLLELL 589
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 77.8 bits (183), Expect = 8e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 881 LDIKGVDHVI 890
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A Q VP W+
Sbjct: 891 NYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE-DCNLLSELVRVLSDADQLVPEWM 946
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MPK RQTLMFSATFP +Q A++ L Y+ LA+ ++G+ ++
Sbjct: 719 MGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANK 778
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D +K+ LL++L
Sbjct: 779 CVLQEFEKCDRSEKKDKLLEIL 800
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + AD L L S P +IHG R QRER +ALR+FR G P+L+ATAVA RG
Sbjct: 610 MVFVSQRAMADILASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 670 LDIKGVDHVI 679
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D+P ++++Y+HRIGRTGR+GN G ATSF ++ + L +LV +L +A+Q VP+W+
Sbjct: 680 NYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSELVGVLADAQQIVPDWMQGA 738
Query: 688 A 690
A
Sbjct: 739 A 739
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF I IV +MP+ RQTLMFSATFP +Q A+ FL NYV +A+ ++G+ ++
Sbjct: 508 MGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANK 567
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ + +K+ LL+LL
Sbjct: 568 CVLQEFERCERSEKKDKLLELL 589
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
NFD+P D+E YVHRIGRTGR G G+AT+F N + + DL +LL EA Q++P +L
Sbjct: 515 NFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKM 574
Query: 685 TAAD 696
A D
Sbjct: 575 LAGD 578
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
LQ+ P+ +L+F E K D + EYL +G V SIHG ++Q +R + FR +
Sbjct: 437 LQKTSPK----VLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEK 492
Query: 443 PILVATAVAARGLDIPHVRHVI 508
+LVAT VA++GLD + HVI
Sbjct: 493 DVLVATDVASKGLDFQGIEHVI 514
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE +I+ I +RQTL+FSAT P++IQ A+ L + + VGR G+ S
Sbjct: 360 DMGFEDEIKSIFYFFK----AQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASL 415
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
N+ Q++ +V +K +L+ L
Sbjct: 416 NVLQELEFVRSENKLVRVLECL 437
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV +K AD L + + P +IHG R Q+ER AL+ FR+G P+L+ATAV RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 627 LDIKGVDHVI 636
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P+++++Y+HRIGRTGR+GN G ATSF + + + LV L +A+Q VP+W+
Sbjct: 637 NYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKE 696
Query: 685 TA 690
A
Sbjct: 697 AA 698
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF P+I +I+ MPK +RQT+MFSATFP +Q A+ L +Y + + ++G+ ++
Sbjct: 465 MGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANK 524
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D K LL LL
Sbjct: 525 CVIQEFELCDRTSKVDKLLKLL 546
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV +K AD L + + P +IHG R Q+ER AL+ FR+G P+L+ATAV RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 479 LDIPHVRHVI 508
LDI V HVI
Sbjct: 627 LDIKGVDHVI 636
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWLTS 684
N+D+P+++++Y+HRIGRTGR+GN G ATSF + + + LV L +A+Q VP+W+
Sbjct: 637 NYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKE 696
Query: 685 TA 690
A
Sbjct: 697 AA 698
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 MGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFL-YNYVFLAVGRVGSTSE 182
MGF P+I +I+ MPK +RQT+MFSATFP +Q A+ L +Y + + ++G+ ++
Sbjct: 465 MGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANK 524
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ Q+ D K LL LL
Sbjct: 525 CVIQEFELCDRTSKVDKLLKLL 546
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/92 (35%), Positives = 54/92 (58%)
Frame = +2
Query: 233 FIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRERED 412
F+ + N L A + ++I +FV++K AD L +G +HG R+Q +RE
Sbjct: 321 FLRVCEIVNFLTAAHGQNYKMI-IFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREM 379
Query: 413 ALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+L R+G+ ILVAT +A+RG+D+P + HV+
Sbjct: 380 SLNMLRSGEVQILVATDLASRGIDVPDITHVL 411
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
N+D P D+EEYVHR+GRTGR G G A SF +R L+++L +++Q+VP+ L
Sbjct: 412 NYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRD 471
Query: 688 A 690
A
Sbjct: 472 A 472
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
I++FV KKGAD L + L G+ T +HG + Q +RE AL+ + G + ILVAT VA R
Sbjct: 576 IIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGR 635
Query: 476 GLDIPHVRHVI 508
G+D+ V V+
Sbjct: 636 GIDVKDVSLVL 646
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEA 654
N+D+ +E+Y HRIGRTGR G G A +F + + DL ++LVE+
Sbjct: 647 NYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 69 RQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFLLDLL 248
RQT+MF+AT I+ LA+ +L + +G G +E + Q V V E KR L+++L
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVL 568
Query: 249 NAQ 257
+Q
Sbjct: 569 ESQ 571
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T++ D L + + + V+S+HGD Q++R++ ++ FR G T +L++T V ARG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 479 LDIPHVRHVI 508
LD+P V VI
Sbjct: 329 LDVPQVSLVI 338
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR+GR G GVA +F + + RD+ + ++P
Sbjct: 339 NYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMP 392
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T++ D L + + + V+S+HGD Q++R++ ++ FR G T +L++T V ARG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 479 LDIPHVRHVI 508
LD+P V VI
Sbjct: 329 LDVPQVSLVI 338
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
N+DLP++ E Y+HRIGR+GR G GVA +F + + RD+ + ++P
Sbjct: 339 NYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMP 392
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T++ D L E + + V+ +HGD +Q ER+ +R FR+G + +L+ T + ARG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 332 IDVQQVSLVI 341
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVEL 642
N+DLPS+ E Y+HRIGR+GR G GVA +F + + AR L E+
Sbjct: 342 NYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND---ARQLKEI 383
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F T++ D L E + + V+ +HGD +Q ER+ +R FR+G + +L+ T + ARG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 479 LDIPHVRHVI 508
+D+ V VI
Sbjct: 332 IDVQQVSLVI 341
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVEL 642
N+DLPS+ E Y+HRIGR+GR G GVA +F + + AR L E+
Sbjct: 342 NYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND---ARQLKEI 383
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 EDQLILVFVETKKGADQLEEYLYSQGY-PVTSIHGDRNQREREDALRRFRTGQTPILVAT 460
E+ +VFV+ ++ AD + + L GY V +HG +Q +R+ ++ F+TG +LVAT
Sbjct: 550 EEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVAT 609
Query: 461 AVAARGLDIPHVRHVI 508
+VAARGLD+ ++ V+
Sbjct: 610 SVAARGLDVKNLILVV 625
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
D GFEPQI K+V + P ++QT++FSATFP+ ++ LA+ L V + VG
Sbjct: 468 DKGFEPQIMKVVN-NIRP---DKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCS 523
Query: 183 NITQKVVWVDEMDKRSFLLDLL 248
+ITQ V E K LL+LL
Sbjct: 524 DITQNAVICAEHQKFLKLLELL 545
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSF 597
N+D P+ E+YVHR+GRTGR G G A +F
Sbjct: 626 NYDCPNHYEDYVHRVGRTGRAGRKGYAYTF 655
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/94 (35%), Positives = 49/94 (52%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
+ +G + T L P E Q L+FV + K D L + S G S+H +NQ +R
Sbjct: 982 YKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQR 1041
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ L FR G+ +VA+ V ARGL+I + HV+
Sbjct: 1042 DRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVV 1075
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 NFDLP--SDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P + +EYV+RIGRTGR G G +T+F + + + + LV +L EAK++VP WL
Sbjct: 1076 NYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKKEVPEWL 1135
Query: 679 TSTA 690
T A
Sbjct: 1136 TEGA 1139
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 63 GER--QTLMFSATFPKQIQL--LAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRS 230
GER QT++FSA+F + +Q L + Y L V + G+ +E I QK++ V +KR
Sbjct: 920 GERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRD 979
Query: 231 FLLDLL 248
+ LL
Sbjct: 980 AIYKLL 985
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/94 (35%), Positives = 49/94 (52%)
Frame = +2
Query: 227 FLFIGFTKCTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQRER 406
+ +G + T L P E Q L+FV + K D L + S G S+H +NQ +R
Sbjct: 982 YKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQR 1041
Query: 407 EDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ L FR G+ +VA+ V ARGL+I + HV+
Sbjct: 1042 DRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVV 1075
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 NFDLP--SDVEEYVHRIGRTGRMGNLGVATSFFN-DTNRGLARDLVELLVEAKQDVPNWL 678
N+D+P + +EYV+RIGRTGR G G +T+F + + + + LV +L EAK++VP WL
Sbjct: 1076 NYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKKEVPEWL 1135
Query: 679 TSTA 690
T A
Sbjct: 1136 TEGA 1139
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 63 GER--QTLMFSATFPKQIQL--LAQDFLYNYVFLAVGRVGSTSENITQKVVWVDEMDKRS 230
GER QT++FSA+F + +Q L + Y L V + G+ +E I QK++ V +KR
Sbjct: 920 GERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRD 979
Query: 231 FLLDLL 248
+ LL
Sbjct: 980 AIYKLL 985
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+L+FV K ++ + + L + + + +HGD Q ER + L +FR ++ ILVAT VAAR
Sbjct: 514 VLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQILVATDVAAR 572
Query: 476 GLDIPHVRHVI 508
GLDI +R VI
Sbjct: 573 GLDISEIRTVI 583
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSE 182
DMGFE Q++ I + H P +RQ LMFSATF ++++ LA+D L + V + G VG +
Sbjct: 427 DMGFEAQVKSISD-HVRP---DRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANA 482
Query: 183 NITQKVVWVDEMD 221
+I QKV + D
Sbjct: 483 DIEQKVFVMQNQD 495
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWLTST 687
NFD+ D++ +VHRIGRTGR G+ G A + + + + LV+ L Q+VP L
Sbjct: 584 NFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDL 643
Query: 688 A 690
A
Sbjct: 644 A 644
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF TK+ D +E +L +HGDR+ ER+ +L F+ G LV + V ARG
Sbjct: 509 IVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARG 568
Query: 479 LDIPHVRHVI 508
LD+ V VI
Sbjct: 569 LDVQGVPFVI 578
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 517 LPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
LP + YVHRIGR GR +G++ S ++
Sbjct: 582 LPDEKSMYVHRIGRVGRAERMGLSISLVSE 611
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVPNWL 678
N+DLP+ + Y+HR+GRTGR G G A ++F D + + + ++ ++ DVP +L
Sbjct: 449 NYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYL 505
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYS--QGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAA 472
LVFV++K A QL + L + V SI+ ++ +ER++ + RFR G+ +LV T +
Sbjct: 377 LVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELLG 436
Query: 473 RGLDIPHVRHVI 508
RGLD+ V VI
Sbjct: 437 RGLDLSDVGLVI 448
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VF T Q+ L G +HG +Q +R +L +F++ ILV T VAARG
Sbjct: 287 IVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARG 346
Query: 479 LDIPHVRHVI 508
LDIPHV VI
Sbjct: 347 LDIPHVDMVI 356
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVA 588
N+D+PS ++YVHR+GRT R G G+A
Sbjct: 357 NYDMPSQSKDYVHRVGRTARAGRSGIA 383
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F +T + L G+ V S+H Q++R AL FR+ +++ T VA+R
Sbjct: 340 VMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASR 399
Query: 476 GLDIPHVRHVI 508
GLDIPHV V+
Sbjct: 400 GLDIPHVDLVV 410
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD 663
N ++P + Y+HR+GR+ R G G A SF + L + VE ++ K D
Sbjct: 411 NHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQ-AVEQVIGKKLD 461
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++F +T + L G+ V S+H Q++R AL FR+ +++ T VA+R
Sbjct: 340 VMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASR 399
Query: 476 GLDIPHVRHVI 508
GLDIPHV V+
Sbjct: 400 GLDIPHVDLVV 410
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQD 663
N ++P + Y+HR+GR+ R G G A SF + L + VE ++ K D
Sbjct: 411 NHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQ-AVEQVIGKKLD 461
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK L E + ++G+ V +HGD ER D + F+ G +L+ T V ARG
Sbjct: 459 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 518
Query: 479 LDIPHVRHVIILIYHLTWKNT 541
+D+ V +++ Y L K T
Sbjct: 519 IDVAQVS--VVINYDLPIKYT 537
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 526 DVEEYVHRIGRTGRMGNLGVATSFFN 603
D E Y+HRIGRTGR G G+A + +
Sbjct: 552 DCETYLHRIGRTGRFGKTGIAINLID 577
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK L E + ++G+ V +HGD ER D + F+ G +L+ T V ARG
Sbjct: 484 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 543
Query: 479 LDIPHVRHVIILIYHLTWKNT 541
+D+ V +++ Y L K T
Sbjct: 544 IDVAQVS--VVINYDLPIKYT 562
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 526 DVEEYVHRIGRTGRMGNLGVATSFFN 603
D E Y+HRIGRTGR G G+A + +
Sbjct: 577 DCETYLHRIGRTGRFGKTGIAINLID 602
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++F TK L E + ++G+ V +HGD ER D + F+ G +L+ T V ARG
Sbjct: 868 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 927
Query: 479 LDIPHVRHVIILIYHLTWKNT 541
+D+ V +++ Y L K T
Sbjct: 928 IDVAQVS--VVINYDLPIKYT 946
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 526 DVEEYVHRIGRTGRMGNLGVATSFFN 603
D E Y+HRIGRTGR G G+A + +
Sbjct: 961 DCETYLHRIGRTGRFGKTGIAINLID 986
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +2
Query: 362 YPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ V+ +HGD +Q ER+ +R FR+G + +L+ T + ARG+D+ V VI
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVI 54
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVEL 642
N+DLPS+ E Y+HRIGR+GR G GVA +F + + AR L E+
Sbjct: 55 NYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND---ARQLKEI 96
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
L+F T++ QL E L S V+ HG+ ERED ++ F + T +LV T + ARG
Sbjct: 231 LIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARG 290
Query: 479 LDI 487
++I
Sbjct: 291 MNI 293
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTN 612
N+D+ ++E Y+ R GR G G+ G+ SFF + +
Sbjct: 300 NYDVSGNMENYMLRNGRQGNFGSKGLPISFFTEND 334
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQ---GYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVA 469
LVFV + K A L E +SQ G PV + G NQ++R + +F + +L+AT VA
Sbjct: 324 LVFVSSCKQARFLTE-AFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVA 382
Query: 470 ARGLDIPHVRHVI 508
+RGLD H+ VI
Sbjct: 383 SRGLDFEHIDWVI 395
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGS--T 176
DMGF Q+ I+ + +P ERQTL+FSAT + ++ L + + VF++V S T
Sbjct: 236 DMGFSKQLNSII--NNLP--AERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAAT 291
Query: 177 SENITQKVVWVDEMDKRSFLLDLLNA 254
+N+ Q V V+E K + L + A
Sbjct: 292 PDNLKQSYVIVEEEHKINALWSFIEA 317
Score = 33.1 bits (72), Expect = 0.21
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 514 DLPSDVEEYVHRIGRTGRMGNLG 582
D P+ +++Y+HR+GR+ RM + G
Sbjct: 398 DCPAQIDDYIHRVGRSARMDDSG 420
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
++FV+ K D L S G ++HGDR+Q RE + F++ + +LV T + +RG
Sbjct: 650 IIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRG 709
Query: 479 LDIPHVRHVI 508
+D+ + VI
Sbjct: 710 IDVSDLDRVI 719
Score = 35.1 bits (77), Expect = 0.053
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Frame = +1
Query: 508 NFDLPSD-----VEEYVHRIGRTGRMGNL--GVATSFF---NDTNRGLARDLVELLVEAK 657
NFDLP + ++HR GRTGR G G+ SF +D + LA LVEL++
Sbjct: 720 NFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDSLLAPKLVELII--S 777
Query: 658 QDVPN 672
Q++P+
Sbjct: 778 QNLPD 782
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV TKK +++ L G V + Q +R ++L +F+ + +LV+T +A+RG
Sbjct: 421 IVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRG 480
Query: 479 LDIPHVRHVI 508
LDI V+ VI
Sbjct: 481 LDIEGVQTVI 490
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLV 636
N ++P +++Y+HR+GRT R G G + S + R L +++V
Sbjct: 491 NMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEIV 533
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELLVEAKQDVP 669
NFD P + E Y+HRIGR+GR G+LGVA + +R R + + L + +P
Sbjct: 354 NFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTRIEPIP 407
Score = 34.7 bits (76), Expect = 0.070
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 251 CTNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFR 430
C N L R + + +Q I +F + + + L + + GY IH Q R FR
Sbjct: 270 CLNTLFR-KLQINQSI-IFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFR 327
Query: 431 TGQTPILVATAVAARGLDIPHVRHVI 508
G LV + + RG+DI V VI
Sbjct: 328 QGNCRNLVCSDLLTRGIDIQAVNVVI 353
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++FV+ K + L + L Q +P +IH Q ER + F+ Q ILVAT + R
Sbjct: 286 VVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGR 345
Query: 476 GLDIPHVRHV 505
G+DI V V
Sbjct: 346 GMDIERVNIV 355
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTN 612
N+D+P D + Y+HR+ R GR G G+A +F +D N
Sbjct: 357 NYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEN 391
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 ERQTLMFSATFPKQIQLLAQDFLYNYVFLAV-GRVGSTSENITQKVVWVDEMDKRSFLLD 242
++Q +MFSAT PK+++ + + F+ + + + V T + Q V + E +K LL+
Sbjct: 217 QKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLN 276
Query: 243 LLNA 254
LL+A
Sbjct: 277 LLDA 280
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
+++FV+ K + L + L Q +P +IH Q ER + F+ Q ILVAT + R
Sbjct: 278 VVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGR 337
Query: 476 GLDIPHVRHV 505
G+DI V V
Sbjct: 338 GMDIERVNIV 347
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTN 612
N+D+P D + Y+HR+ R GR G G+A +F +D N
Sbjct: 349 NYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEN 383
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 RQTLMFSATFPKQIQLLAQDFLYNYVFLAV-GRVGSTSENITQKVVWVDEMDKRSFLLDL 245
+Q +MFSAT PK+++ + + F+ + + + V T + Q V + E +K LL+L
Sbjct: 210 KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNL 269
Query: 246 LNA 254
L+A
Sbjct: 270 LDA 272
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAAR 475
++VF + E L P SIHG + Q++R +F +T IL+ T VAAR
Sbjct: 317 VMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAAR 376
Query: 476 GLDIPHVRHVI 508
GLDIP V ++
Sbjct: 377 GLDIPAVDWIV 387
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + A +L L S +H Q++R L +F + +L+AT VAARG
Sbjct: 277 IVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARG 336
Query: 479 LDIPHVRHVI 508
LDI + HVI
Sbjct: 337 LDIQGIDHVI 346
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
++ +P VE Y+HR GRT R + G+ + +R
Sbjct: 347 HYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSR 382
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+VFV + A +L L S +H Q++R L +F + +L+AT VAARG
Sbjct: 444 IVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARG 503
Query: 479 LDIPHVRHVI 508
LDI + HVI
Sbjct: 504 LDIQGIDHVI 513
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 615
++ +P VE Y+HR GRT R + G+ + +R
Sbjct: 514 HYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSR 549
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
L R E++ +VF T K + + L+ G + ++ + R+ +++F Q
Sbjct: 257 LCRRMDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQN 316
Query: 443 PILVATAVAARGLDIPHVRHVIIL 514
ILV T VAARG+DIP + VI L
Sbjct: 317 NILVVTDVAARGVDIPLLDTVINL 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQI 110
+MGF+ Q+ + ++ +P++ RQTL+FSAT PK +
Sbjct: 181 EMGFQDQLTETLK--RIPES--RQTLLFSATLPKML 212
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N P + +VHR+GR R G G A S + DL L
Sbjct: 339 NLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFL 384
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 263 LQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT 442
L R E++ +VF T K + + L+ G + ++ + R+ +++F Q
Sbjct: 257 LCRRMDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQN 316
Query: 443 PILVATAVAARGLDIPHVRHVIIL 514
ILV T VAARG+DIP + VI L
Sbjct: 317 NILVVTDVAARGVDIPLLDTVINL 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 3 DMGFEPQIRKIVECHTMPKTGERQTLMFSATFPKQI 110
+MGF+ Q+ + ++ +P++ RQTL+FSAT PK +
Sbjct: 181 EMGFQDQLTETLK--RIPES--RQTLLFSATLPKML 212
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVELL 645
N P + +VHR+GR R G G A S + DL L
Sbjct: 339 NLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFL 384
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF + + + +L S G VT + +Q++R+ A+ + R + ILV++ + ARG
Sbjct: 263 LVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARG 322
Query: 479 LDIPHVRHVI 508
+D +V V+
Sbjct: 323 IDADNVNLVV 332
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N D ++ E Y HRIGR R G G A + D
Sbjct: 333 NIDAAANEETYFHRIGRAARFGAHGAAVTLLED 365
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
LVF + + + +L S G VT + +Q++R+ A+ + R + ILV++ + ARG
Sbjct: 263 LVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARG 322
Query: 479 LDIPHVRHVI 508
+D +V V+
Sbjct: 323 IDADNVNLVV 332
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 606
N D ++ E Y HRIGR R G G A + D
Sbjct: 333 NIDAAANEETYFHRIGRAARFGAHGAAVTLLED 365
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+V+ ++ Q+ + L G P + H +++R + ++ + P++ AT G
Sbjct: 418 IVYCRSRNECGQVAKMLEIAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMG 477
Query: 479 LDIPHVRHVI 508
+D P VR VI
Sbjct: 478 IDKPDVRAVI 487
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVE 639
NFD P + Y+HR+GRT R N G A SF + R + E
Sbjct: 382 NFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 425
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVE 639
NFD P + Y+HR+GRT R N G A SF + R + E
Sbjct: 449 NFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 492
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 514 DLPSDVEEYVHRIGRTGRMGNLGVAT------SFFNDTNRGLARDLVELLVEAKQDVPNW 675
++ +D Y+HRIGR GR G G AT F + L ++E ++ +PNW
Sbjct: 450 EMSTDFPSYMHRIGRVGRDGCGGRATVLIDEHHLFGGPMSNIIEQLCSFMLECEETLPNW 509
Query: 676 L 678
L
Sbjct: 510 L 510
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +1
Query: 514 DLPSDVEEYVHRIGRTGRMGNLGVATSF--FNDTNRGLARDLVELLV----EAKQDVPNW 675
++ +D + Y HRIGR GR G G +T + G A +++E L E+K+D+P W
Sbjct: 452 EMSADFDTYKHRIGRVGRDGCGGKSTVLVEHHQLQGGPASNVIEQLYNFMKESKEDIPQW 511
Query: 676 L 678
+
Sbjct: 512 M 512
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
++ I +F ET + Q+ L GY + + ++ + + +V T +
Sbjct: 376 NETIAIFCETVQRVTQVTMALRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNI 435
Query: 467 AARGLDIPHVRHVIIL 514
ARG+D+ V+H II+
Sbjct: 436 LARGIDVSSVKHTIIM 451
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGAD----QLEEYLYSQGYPVTSIHGDR-----------N 394
+L + D ++FV TKK AD L + L+ G + G + +
Sbjct: 274 ILDQNEQTSDFRAIIFVRTKKEADFLNYVLNDRLHELGIKSDWMSGQKKSTASSADISAS 333
Query: 395 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
++++ + L+ F G+ ILV+T+VA GLDIP VI
Sbjct: 334 KQKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVI 371
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 LLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRF-RTG 436
LL + R ++ +L+F + K D LEE+L S YP I G+ R+ A+ RF +
Sbjct: 1519 LLPKLR-KDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKEN 1577
Query: 437 QTPILVATAVAARGLDIPHVRHVIILIYHLTW 532
+ A GL I ++I+ W
Sbjct: 1578 SDRFVFLLCTRAGGLGINLTAADTVIIFDSDW 1609
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + D LE++ +GY I G ++R+DA+ R+ G + + A
Sbjct: 959 VLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRA 1018
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++IY W
Sbjct: 1019 GGLGINLATADTVIIYDSDW 1038
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + D LE++ +GY I G ++R+DA+ R+ G + + A
Sbjct: 959 VLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRA 1018
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++IY W
Sbjct: 1019 GGLGINLATADTVIIYDSDW 1038
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
+++ +TK+ D + L G H + +RE A F + +VAT G
Sbjct: 450 IIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRDKITTIVATVAFGMG 509
Query: 479 LDIPHVRHVI 508
+D P VR+VI
Sbjct: 510 IDKPDVRNVI 519
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFF 600
++ P+++E Y IGR GR G+ + F+
Sbjct: 520 HYGCPNNIESYYQEIGRAGRDGSPSICRVFW 550
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + D LE++ +GY I G ++R+DA+ R+ G + + A
Sbjct: 959 VLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRA 1018
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++IY W
Sbjct: 1019 GGLGINLATADTVIIYDSDW 1038
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 508 NFDLPSDVEEYVHRIGRTGRMGNLGVATS 594
N++LP+D + +VHR GRTGR G G S
Sbjct: 473 NYNLPADDKLFVHRAGRTGRAGQDGYVIS 501
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 KCTNLLQRA--RPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+CT + + R Q +++ ++ +++ + L S G H +R A +
Sbjct: 294 ECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQ 353
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ +G+ ++VAT G+D P+VR VI
Sbjct: 354 GWISGKIQVIVATVAFGMGIDKPNVRFVI 382
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 KCTNLLQRA--RPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALR 421
+CT + + R Q +++ ++ +++ + L S G H +R A +
Sbjct: 317 ECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQ 376
Query: 422 RFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ +G+ ++VAT G+D P+VR VI
Sbjct: 377 GWISGKIQVIVATVAFGMGIDKPNVRFVI 405
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT--PILVATAVA 469
+L+F + D LE YL +GY + G +R++ + F + L++T
Sbjct: 772 VLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAG 831
Query: 470 ARGLDIPHVRHVII 511
G+++ H+II
Sbjct: 832 GLGINLTSANHIII 845
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 365 PVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI--ILIYHLTW 532
P+ ++HG + R ++ F ++++T V ARG+DI + VI L H +W
Sbjct: 285 PLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSW 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 511 FDLPSDVEEYVHRIGRTGRMGNLGVA 588
FDLP +VHR GRT R G G A
Sbjct: 334 FDLPKHSSWFVHRAGRTARCGREGNA 359
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQT--PILVATAVA 469
+L+F + D LE YL +GY + G +R++ + F + L++T
Sbjct: 772 VLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAG 831
Query: 470 ARGLDIPHVRHVII 511
G+++ H+II
Sbjct: 832 GLGINLTSANHIII 845
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 392 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+++++ + L+ F G+ ILV+T+VA GLD+P VI
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVI 789
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 392 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+++++ + L+ F G+ ILV+T+VA GLD+P VI
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVI 789
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + + D +E+ +GY I G + R+DA+ R+ G + + A
Sbjct: 945 VLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRA 1004
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++IY W
Sbjct: 1005 GGLGINLATADTVIIYDSDW 1024
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + + D +E+ +GY I G + R+DA+ R+ G + + A
Sbjct: 945 VLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRA 1004
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++IY W
Sbjct: 1005 GGLGINLATADTVIIYDSDW 1024
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 296 ILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT-GQTPILVATAVAA 472
+L+F + D L+EYL + +P + G R+ AL + G T + A
Sbjct: 730 VLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRA 789
Query: 473 RGLDIPHVRHVIILIYHLTW 532
GL I ++I+ W
Sbjct: 790 GGLGINLATADTVIIFDSDW 809
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 287 DQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAV 466
++ I +F ET + Q+ L GY + + ++ + + +V T +
Sbjct: 223 NETIAIFCETVQRVTQVTMTLRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNI 282
Query: 467 AARGLDIPHVRHVIIL 514
ARG+D+ V+H II+
Sbjct: 283 LARGIDVSSVKHTIIM 298
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 290 QLILVFVETKKGADQLEEYLYSQ-GYPV-TSIHG--DRNQREREDALRRFRTGQTPILVA 457
Q + F+ K DQ Y GY + T+ G + +E++ L +F G+ ++VA
Sbjct: 774 QRVSDFLNESKVLDQFGNYGEQMVGYVLGTNKQGAVQQTSQEQQLTLDKFNNGRLKVIVA 833
Query: 458 TAVAARGLDI 487
T+V GLD+
Sbjct: 834 TSVVEEGLDV 843
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/81 (19%), Positives = 30/81 (37%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
L+F + K D L+ +L GY + G +R+ + RF + + G
Sbjct: 1208 LIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGG 1267
Query: 479 LDIPHVRHVIILIYHLTWKNT 541
+ + ++ Y W T
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPT 1288
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/81 (19%), Positives = 30/81 (37%)
Frame = +2
Query: 299 LVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRTGQTPILVATAVAARG 478
L+F + K D L+ +L GY + G +R+ + RF + + G
Sbjct: 1208 LIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGG 1267
Query: 479 LDIPHVRHVIILIYHLTWKNT 541
+ + ++ Y W T
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPT 1288
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/30 (33%), Positives = 22/30 (73%)
Frame = +3
Query: 66 ERQTLMFSATFPKQIQLLAQDFLYNYVFLA 155
++Q +MFSAT PK+++ + + F+ + F++
Sbjct: 217 QKQVMMFSATLPKELRTVCKRFMQDVRFIS 246
>Z75954-3|CAB00108.1| 323|Caenorhabditis elegans Hypothetical
protein F58H1.5 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +1
Query: 484 HTARTSRNNFDLPSDVEEYVHRIGRTGRMG------NLGVATSFFNDTNR 615
HT SR N PS+V E + IG G +G N+G T N NR
Sbjct: 192 HTVSVSRQNGCPPSEVYEEIAPIGTMGHVGYMTTRPNMGNMTPMNNMNNR 241
>Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical
protein ZK666.8 protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 309 WKLRKVRIN*KNIYIPKATR*HRSME-TVTNVNVKMLYDVFELDKHQYLWQQLSLQEA 479
W+ +V+ + +TR HR +E T T+ V +LY + EL + W+ + +A
Sbjct: 227 WRTHRVKAGFRGTQRYVSTRVHRRLEQTPTDDMVSLLYTLIELLAGELPWRNIENSDA 284
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 690 CGASKPIRYVLFSLDEQFDEVSCQTTVCVIK 598
CG SK IRY L + DE + TVC+ K
Sbjct: 569 CGNSKRIRYSLQNQDEHLTVDTMSGTVCIQK 599
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 254 TNLLQRARPEEDQLILVFVETKKGADQLEEYLYSQGYPVTSIHGDRNQREREDALRRFRT 433
++LL+ + + L+ + ++ + + + + V H ERE FR
Sbjct: 164 SSLLEILKERANGLLFIKHGLERNGCKDRNVMSTLAWGVAYHHAGLTMEERECIELGFRE 223
Query: 434 GQTPILVATAVAARGLDIPHVRHVI 508
ILVAT+ A G+++P R +I
Sbjct: 224 KNIVILVATSTLASGVNLPAERVLI 248
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 398 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVI 508
+ + + LRRF + L+AT+V G+D+ VI
Sbjct: 440 KRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVI 476
>AF099920-10|AAO91710.1| 1051|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 2, isoform b protein.
Length = 1051
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 27 RKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVW 206
R + CHT+ ++ L++ A P + L + + YVF A T ++IT +V+
Sbjct: 224 RLLALCHTVMPERDKGQLVYQAQSPDEHALTSAARNFGYVFRA-----RTPQSITIEVMG 278
Query: 207 VDEMDKRSFLLDLLN 251
+E + +LD N
Sbjct: 279 NEETHELLAILDFNN 293
>AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 2, isoform a protein.
Length = 1222
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 27 RKIVECHTMPKTGERQTLMFSATFPKQIQLLAQDFLYNYVFLAVGRVGSTSENITQKVVW 206
R + CHT+ ++ L++ A P + L + + YVF A T ++IT +V+
Sbjct: 395 RLLALCHTVMPERDKGQLVYQAQSPDEHALTSAARNFGYVFRA-----RTPQSITIEVMG 449
Query: 207 VDEMDKRSFLLDLLN 251
+E + +LD N
Sbjct: 450 NEETHELLAILDFNN 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,731,380
Number of Sequences: 27780
Number of extensions: 319769
Number of successful extensions: 1095
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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