Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20930
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...   163   7e-42
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.6  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score =  163 bits (395), Expect = 7e-42
 Identities = 73/86 (84%), Positives = 82/86 (95%)
 Frame = +2

Query: 506 LDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKAPAINVNDSVTKSK 685
           LDDGGDLTNLVH ++P+LLK+++G++EETTTGVHNLYKMFREG L  PAINVNDSVTKSK
Sbjct: 129 LDDGGDLTNLVHAEHPELLKEIRGLSEETTTGVHNLYKMFREGRLGMPAINVNDSVTKSK 188

Query: 686 FDNLYGCRESLLDGIKRATDIMIAGK 763
           FDNLYGCRESLLDGIKRATD+MIAGK
Sbjct: 189 FDNLYGCRESLLDGIKRATDVMIAGK 214



 Score =  160 bits (389), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = +3

Query: 255 KGARIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGE 434
           +GARIAG LHMT+QTAVLIETLIELGAEVQWSS NI+STQD AAAA+V  G+P+YAWKGE
Sbjct: 45  RGARIAGCLHMTIQTAVLIETLIELGAEVQWSSCNIFSTQDHAAAAMVKAGVPVYAWKGE 104

Query: 435 TDDEYIWCIEQTLIFPDGKPLNMIL 509
           TD+EY+WCI QTLIFPDGKPLNMIL
Sbjct: 105 TDEEYMWCIRQTLIFPDGKPLNMIL 129



 Score = 72.5 bits (170), Expect = 1e-14
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 130 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILK 258
           KP YK+AD  LAE+GRKEI+LAE EMPGLMACR+KY P KIL+
Sbjct: 3   KPAYKVADISLAEFGRKEIVLAENEMPGLMACRQKYGPLKILR 45



 Score = 30.7 bits (66), Expect = 0.054
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +1

Query: 760 EVCVVAGYGDVGK 798
           +VCVVAGYGDVGK
Sbjct: 214 KVCVVAGYGDVGK 226


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 272  GYSGTFSILAGAYFRRHAIRPGISFSANI 186
            G  G    + G Y RR+A+RP I   ANI
Sbjct: 1802 GLPGKEYTVLGKYKRRYAMRPEIKVLANI 1830


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,470
Number of Sequences: 2352
Number of extensions: 18541
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)