Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20928
(691 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 172 3e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 172 3e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 172 3e-43
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 2.6
BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p pro... 29 6.0
AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB... 29 6.0
AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA... 29 6.0
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 29 7.9
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 29 7.9
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 124 bits (300), Expect = 9e-29
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 683
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTS RGST
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGST 213
Query: 684 GT 689
GT
Sbjct: 214 GT 215
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 126 bits (303), Expect = 4e-29
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 683
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTS RGST
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
Query: 684 GT 689
GT
Sbjct: 214 GT 215
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 126 bits (303), Expect = 4e-29
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 683
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTS RGST
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
Query: 684 GT 689
GT
Sbjct: 214 GT 215
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 126 bits (303), Expect = 4e-29
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 683
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTS RGST
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
Query: 684 GT 689
GT
Sbjct: 214 GT 215
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 126 bits (303), Expect = 4e-29
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSTRGST 683
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTS RGST
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
Query: 684 GT 689
GT
Sbjct: 214 GT 215
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 522 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 644
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p
protein.
Length = 925
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCTRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 233 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 267
>AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB,
isoform B protein.
Length = 725
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCTRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 33 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 67
>AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA,
isoform A protein.
Length = 925
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCTRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 233 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 267
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 161 LPCRAHDHGRDXDRVHEDRRGLYLHRVIRXRREN-RHVHRLEQRPPLLN 18
L C H D R+H ++GL + V+ REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 161 LPCRAHDHGRDXDRVHEDRRGLYLHRVIRXRREN-RHVHRLEQRPPLLN 18
L C H D R+H ++GL + V+ REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,338,309
Number of Sequences: 53049
Number of extensions: 733830
Number of successful extensions: 2253
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2253
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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