Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20927
(676 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5598F Cluster: PREDICTED: similar to CG14813-PA... 83 8e-15
UniRef50_Q7ZU89 Cluster: Archain 1 like; n=2; Bilateria|Rep: Arc... 70 5e-11
UniRef50_P48444 Cluster: Coatomer subunit delta; n=40; Eumetazoa... 70 5e-11
UniRef50_Q9W555 Cluster: CG14813-PA; n=5; Diptera|Rep: CG14813-P... 64 3e-09
UniRef50_A7T498 Cluster: Predicted protein; n=1; Nematostella ve... 62 2e-08
UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Re... 54 2e-06
UniRef50_Q6BLD4 Cluster: Similar to ca|CA4136|CaRET2 Candida alb... 53 7e-06
UniRef50_P43621 Cluster: Coatomer subunit delta; n=7; Saccharomy... 52 1e-05
UniRef50_A3LVB0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 49 9e-05
UniRef50_Q4PBN7 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q93Y22 Cluster: Coatomer subunit delta; n=24; Eukaryota... 48 2e-04
UniRef50_UPI00006A1DC9 Cluster: UPI00006A1DC9 related cluster; n... 43 0.008
UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.055
UniRef50_Q6C3S2 Cluster: Yarrowia lipolytica chromosome E of str... 40 0.055
UniRef50_P09619 Cluster: Beta-type platelet-derived growth facto... 36 1.2
UniRef50_Q53913 Cluster: Beta-ketoacyl synthase homologue; n=1; ... 35 2.1
UniRef50_Q7WJA7 Cluster: Putative uncharacterized protein; n=3; ... 34 2.7
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 34 3.6
UniRef50_Q89BE3 Cluster: Bll8212 protein; n=2; Alphaproteobacter... 33 4.8
UniRef50_A6PQ87 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q4QEP9 Cluster: Coatomer delta subunit-like protein; n=... 33 6.3
UniRef50_A7F3Q7 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.3
UniRef50_UPI0000DA3977 Cluster: PREDICTED: hypothetical protein;... 33 8.4
UniRef50_Q92LC8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q8IBY1 Cluster: 50S ribosomal protein L1, putative; n=5... 33 8.4
>UniRef50_UPI0000D5598F Cluster: PREDICTED: similar to CG14813-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG14813-PA - Tribolium castaneum
Length = 529
Score = 82.6 bits (195), Expect = 8e-15
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 HNADSFVSRLRSEGD-VTAPVASPAQHDAGKP--VPADHKDVHLRFEERLNLIAGRDGDI 421
H+ +SFV +L+SEG+ V APV + K + +D DVHLR EE+L + GRDG +
Sbjct: 250 HDVESFVDQLKSEGENVIAPVNNSISQGGMKTPAIKSDINDVHLRLEEKLIVRMGRDGGV 309
Query: 422 QTFELSGLLTLRISNEQFGRIHVXVDNKD 508
Q FEL GL+TL I +E++GRI V ++NKD
Sbjct: 310 QQFELLGLVTLHIGDEKWGRIRVQLENKD 338
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPNVDKE F+ IGLKQ +PFP+H+DVGVLKWRL +T D+ L PL
Sbjct: 346 THPNVDKELFKLRSQIGLKQPSKPFPLHTDVGVLKWRLQST-DESLVPL 393
>UniRef50_Q7ZU89 Cluster: Archain 1 like; n=2; Bilateria|Rep:
Archain 1 like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 512
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 260 DSFVSRLRSEGD-VTAPVASPAQHDAGKPV--PADHKDVHLRFEERLNLIAGRDGDIQTF 430
D FV +L+SEG+ + A +A K + P + + VHLR EE+++L GRDG +Q
Sbjct: 235 DFFVDKLKSEGENIVTTSAGRKASEASKVLQPPVNMESVHLRVEEKISLTCGRDGGLQNM 294
Query: 431 ELSGLLTLRISNEQFGRIHVXVDNKDR 511
E+ G++TL++++E+ GRI + V+N D+
Sbjct: 295 EVLGMITLKVADEKNGRIIIVVNNNDK 321
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THP+VDK+ F + +IGLK ++ FP++SD+GVLKWRL +T D+ L PL
Sbjct: 328 THPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQST-DESLIPL 375
>UniRef50_P48444 Cluster: Coatomer subunit delta; n=40;
Eumetazoa|Rep: Coatomer subunit delta - Homo sapiens
(Human)
Length = 511
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 260 DSFVSRLRSEGD-VTAPVASPAQHDAGK--PVPADHKDVHLRFEERLNLIAGRDGDIQTF 430
D+FV +L+SEG+ + + +A K P + + VH++ EE++ L GRDG +Q
Sbjct: 236 DNFVDKLKSEGETIMSSSMGKRTSEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNM 295
Query: 431 ELSGLLTLRISNEQFGRIHVXVDNKDR 511
EL G++ LRIS++++GRI + V+N+D+
Sbjct: 296 ELHGMIMLRISDDKYGRIRLHVENEDK 322
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPNVDK+ F + +IGLK ++ FP++SDVGVLKWRL TT ++ PL
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTT-EESFIPL 376
>UniRef50_Q9W555 Cluster: CG14813-PA; n=5; Diptera|Rep: CG14813-PA -
Drosophila melanogaster (Fruit fly)
Length = 532
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPNVDKE F+S IGLK +PFP+++DVGVLKWR + D+ PL
Sbjct: 349 THPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRF-VSQDESAVPL 396
Score = 60.5 bits (140), Expect = 4e-08
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Frame = +2
Query: 254 NADSFVSRLRSEGDVTAPVASPAQHDAGKPVPAD-------------HKD-VHLRFEERL 391
+ DSFV +L++EG+ A +A PA G A HK+ VHL+ E++L
Sbjct: 244 DVDSFVDQLKNEGEKIANLA-PAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIEDKL 302
Query: 392 NLIAGRDGDIQTFELSGLLTLRISNEQFGRI 484
+ GRDG +Q FE SGLLTLRI++E +GRI
Sbjct: 303 VVRLGRDGGVQQFENSGLLTLRITDEAYGRI 333
>UniRef50_A7T498 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 381
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPNVDK++F ++ LKQA + FP +SD+G+L+WR+ TT D+ L PL
Sbjct: 236 THPNVDKKSFAQDNILVLKQAGKSFPTNSDIGLLRWRMQTT-DESLMPL 283
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +2
Query: 365 VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRIHVXVDNKDRDRYSCRPIQTW 544
VHL+ EE++ L AGRDG +Q E+ G++ LRIS+ QF +I + V+N D + +
Sbjct: 181 VHLKTEEKITLTAGRDGGLQNMEIRGIVLLRISDSQFAQIKLAVENNDDKGFQIQTHPNV 240
Query: 545 TKKRSAR 565
KK A+
Sbjct: 241 DKKSFAQ 247
>UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 424
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPN+DK + ++GLK RPFP S +GVLKWR +T D+ PL
Sbjct: 242 THPNIDKALHANEKILGLKDPNRPFPCGSALGVLKWRF-STKDESALPL 289
Score = 41.5 bits (93), Expect = 0.018
Identities = 29/113 (25%), Positives = 44/113 (38%)
Frame = +2
Query: 272 SRLRSEGDVTAPVASPAQHDAGKPVPADHKDVHLRFEERLNLIAGRDGDIQTFELSGLLT 451
S ++ GD + P A P A + V L EE+LN+ R+G ++ +L G +
Sbjct: 156 SAMQRSGDFGIEPSRPEMPVAAAPAAAPTESVSLVVEEKLNVTLNRNGGLEQMDLQGNML 215
Query: 452 LRISNEQFGRIHVXVDNKDRDRYSCRPIQTWTKKRSARPA*LG*SRLNAPSRC 610
L + NE I V + + + K A LG N P C
Sbjct: 216 LEVRNEDDALIRVVTKAGENAGFQFKTHPNIDKALHANEKILGLKDPNRPFPC 268
>UniRef50_Q6BLD4 Cluster: Similar to ca|CA4136|CaRET2 Candida
albicans CaRET2 Coatomer complex delta chain; n=3;
Saccharomycetales|Rep: Similar to ca|CA4136|CaRET2
Candida albicans CaRET2 Coatomer complex delta chain -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 551
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMH-SDVGVLKWRLATTNDD-KLAPL 675
THPNVD+ F VIGLK +PFP + +GVL+WR NDD L P+
Sbjct: 351 THPNVDRNLFTQQNVIGLKDKTKPFPSNDQSLGVLRWRAVGKNDDSSLLPI 401
>UniRef50_P43621 Cluster: Coatomer subunit delta; n=7;
Saccharomycetales|Rep: Coatomer subunit delta -
Saccharomyces cerevisiae (Baker's yeast)
Length = 546
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMH-SDVGVLKWR-LATTNDDKLAPL 675
THPN+DK++F ST +I L+ + FP + +GVL+WR +A DD L PL
Sbjct: 349 THPNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLRWRKVAPAEDDSLIPL 399
>UniRef50_A3LVB0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 551
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSD-VGVLKWRLATTNDD-KLAPL 675
THP VD+ F S GVI LK +PFP + +GVL+WR DD L P+
Sbjct: 350 THPKVDRNLFTSQGVISLKDKTKPFPANDHALGVLRWRAVGKKDDLSLIPI 400
Score = 33.1 bits (72), Expect = 6.3
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 311 ASPAQHDAGKPVPADHK----DVHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFG 478
A+P + PVP + K + + E+++++ R+G + E+ G L LRI+N +
Sbjct: 272 ATPPISQSASPVPTNLKVPNNGILITVNEKVSVVLSREGAAVSSEVKGDLQLRINNVELA 331
Query: 479 RIHVXVDNKDR 511
+ ++ DR
Sbjct: 332 HSKILLETGDR 342
>UniRef50_Q4PBN7 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 554
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
T+P +DK A+ S ++ + A++PFP++ +GVL+WR+ T D+ PL
Sbjct: 368 TNPQIDKAAWSSDRIVAPRDARKPFPVNQSLGVLRWRM-VTKDETALPL 415
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 302 APVASPAQHDAGKPV-PADHKDVHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFG 478
AP AS A D + P + VH+ +ER+++ RDG +++ E+ G L L+I++
Sbjct: 284 APAASVAAIDPLDLLEPVQQEPVHVVVKERISITGNRDGGLESLEIKGDLLLKITDPSLA 343
Query: 479 RIHV 490
++ +
Sbjct: 344 KVRL 347
>UniRef50_Q93Y22 Cluster: Coatomer subunit delta; n=24;
Eukaryota|Rep: Coatomer subunit delta - Arabidopsis
thaliana (Mouse-ear cress)
Length = 527
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 DSFVSRLRSEG-DVTAPVASPAQHDAGKPVPADHKDVHLRFEERLNLIAGRDGDIQTFEL 436
+ + L++EG DV V Q A P P D L EE+LN+ RDG + +F++
Sbjct: 251 NQLMESLKAEGEDVIEDVKPTGQSKAAAPPPTD--PFTLTVEEKLNVALRRDGGLSSFDM 308
Query: 437 SGLLTLRISNEQFGRIHVXV 496
G L+L+I N++ G + V +
Sbjct: 309 QGTLSLQILNQEDGFVQVQI 328
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPM---HSDVGVLKWRLATTNDDKLAPL 675
THPN++++ F + ++GLK+ +PFP VG+L+WR+ D+ + PL
Sbjct: 340 THPNINRDMFNNENILGLKRPDQPFPTGQGGDGVGLLRWRMQRA-DESMVPL 390
>UniRef50_UPI00006A1DC9 Cluster: UPI00006A1DC9 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A1DC9 UniRef100 entry -
Xenopus tropicalis
Length = 513
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THP VDK + S V+ L+ +PFP S V L+W L T D+ + PL
Sbjct: 332 THPKVDKRLYDSESVLALRDPTKPFPT-SRVAFLRWSL-KTQDESMLPL 378
>UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 540
Score = 39.9 bits (89), Expect = 0.055
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
THPN+DK F V+ L+ + FP G+LKWR TN + + P+
Sbjct: 363 THPNIDKALFGEQSVLRLRDGGKGFP---SGGILKWR-CKTNQESMMPI 407
>UniRef50_Q6C3S2 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 519
Score = 39.9 bits (89), Expect = 0.055
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQAQRPFPMH-SDVGVLKW 636
THPNVDK F S +IGLK R FP + + +GVL++
Sbjct: 332 THPNVDKALFSSRQIIGLKDPSRGFPSNGAALGVLRY 368
Score = 35.5 bits (78), Expect = 1.2
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = +2
Query: 260 DSFVSRLRSEGDVTAPV--ASPAQHDA-GKPVPADH----KDVHLRFEERLNLIAGRDGD 418
DS + L + D+ P + P Q A P+ + + VHL E + GRDG
Sbjct: 236 DSPSASLLANADIAVPTPKSKPQQQTAPAAAAPSAYNPEVQGVHLTVAEVVTATLGRDGS 295
Query: 419 IQTFELSGLLTLRISNEQFGRIHVXVD-NKDRDRYSCRP 532
+++ E+ G + LRI N +I + ++ N +Y P
Sbjct: 296 VKSAEVKGDVQLRIGNPDHTKIRIALEANAPGVKYRTHP 334
>UniRef50_P09619 Cluster: Beta-type platelet-derived growth factor
receptor precursor; n=25; Amniota|Rep: Beta-type
platelet-derived growth factor receptor precursor - Homo
sapiens (Human)
Length = 1106
Score = 35.5 bits (78), Expect = 1.2
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -1
Query: 262 VRVVPRLPSFMAERPTVRVSLAGVVGIFSAID-SDGDDEDIVELPKPLPKDICERG---G 95
+R RLP F R + S +++A+ ++GD++ I+ LP P P ++ + G G
Sbjct: 986 LRSQARLPGFHGLRSPLDTSSV----LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEG 1040
Query: 94 WPRLAASNLSRCNSLGVRACGS 29
P LA+S L+ N+ +C S
Sbjct: 1041 SPSLASSTLNEVNTSSTISCDS 1062
>UniRef50_Q53913 Cluster: Beta-ketoacyl synthase homologue; n=1;
Streptomyces coriofaciens|Rep: Beta-ketoacyl synthase
homologue - Streptomyces coriofaciens
Length = 527
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 670 EPACHRW*WPAST*GLRRRCASGRGVEPASAQSRRSSGTLLCP 542
+PA W WP + RR C RG SA+S R+ G L P
Sbjct: 277 QPASSPWRWPCTACWSRRACRRSRGPVTPSARSARARGRGLLP 319
>UniRef50_Q7WJA7 Cluster: Putative uncharacterized protein; n=3;
Bordetella|Rep: Putative uncharacterized protein -
Bordetella bronchiseptica (Alcaligenes bronchisepticus)
Length = 423
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 302 APVASPAQHDAGKPVPADHKDVHLRFEERLNLIAGR 409
AP PA H G PVP H+D L ++L+++A +
Sbjct: 280 APPGQPATHTPGAPVPGIHQDATLLVRQQLDVLANQ 315
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 529 THPNVDKEAFRSTGVIGLKQA-QRPFPMHSDVGVLKWR 639
THPN++KE F+ G++ LK P+++ + ++KWR
Sbjct: 365 THPNLNKEKFQDCGILELKDGINCTLPVNTLMPLVKWR 402
>UniRef50_Q89BE3 Cluster: Bll8212 protein; n=2;
Alphaproteobacteria|Rep: Bll8212 protein -
Bradyrhizobium japonicum
Length = 377
Score = 33.5 bits (73), Expect = 4.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 140 DDVLVVSI*IYCREDSNDTGQRYSYSGSFCHEARQPRHNADSFVSRLR 283
+D L ++ YCR G+ Y + + C E R+P H D + LR
Sbjct: 320 NDDLETALKTYCRRREERVGRVYDIAYAICREERKPEHGRDYSMGLLR 367
>UniRef50_A6PQ87 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 389
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 223 RPTVRVSLAGVVGIFSAIDSDGDDEDIVELPKPLPKDICERGGWPRLAASNL-SRC 59
+P + +AG GIF + D E ++ +P+ + R GW +LA NL +RC
Sbjct: 241 KPLNHLEIAGKDGIFHQAEGTIDHERLIIASPLVPEPVSVRFGWHKLANPNLVNRC 296
>UniRef50_Q4QEP9 Cluster: Coatomer delta subunit-like protein; n=7;
Trypanosomatidae|Rep: Coatomer delta subunit-like
protein - Leishmania major
Length = 536
Score = 33.1 bits (72), Expect = 6.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 532 HPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPL 675
H V+K F S V+ + +PFP+ V +L+WRL +N AP+
Sbjct: 356 HAKVNKTLFASDQVLTMADG-KPFPVQQPVTILRWRL--SNSSVTAPI 400
>UniRef50_A7F3Q7 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 95
Score = 33.1 bits (72), Expect = 6.3
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 182 DSNDTGQRYSYSGSFCHEARQPRHNADSFVSRLRSEGDVTAPVASPAQHDAG---KPVPA 352
D+N+T SY+ S EA+ N + R +E D P ASPA HD G +P A
Sbjct: 19 DTNNTTDHRSYNTSPT-EAKGFSANR---IERYLAENDSPVPYASPAHHDGGNLERPSTA 74
Query: 353 DHKDVHLRFEE 385
HK ++L+ ++
Sbjct: 75 THK-MNLKLQQ 84
>UniRef50_UPI0000DA3977 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 202
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -2
Query: 333 ASCCAGDATGAVTSPSLRSRDTNESALCRG 244
ASCC G +GA+T P LRSR LC G
Sbjct: 24 ASCCRGRRSGALTGPGLRSRHVR--LLCCG 51
>UniRef50_Q92LC8 Cluster: Putative uncharacterized protein; n=1;
Sinorhizobium meliloti|Rep: Putative uncharacterized
protein - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 93
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 622 RRRCASGRGVEPASAQSRRSSGTLLCPRL 536
+RRCA+GRG SA+++R+ L PRL
Sbjct: 63 KRRCAAGRGYGQGSARAQRTRSWYLLPRL 91
>UniRef50_Q8IBY1 Cluster: 50S ribosomal protein L1, putative; n=5;
Plasmodium|Rep: 50S ribosomal protein L1, putative -
Plasmodium falciparum (isolate 3D7)
Length = 399
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 341 PVPADHKDVHLRFEERLNLIAGRDGDIQTFELSGLLT 451
P+ A HK + EE++NL D Q+F L G +T
Sbjct: 340 PITAKHKKQKINIEEKINLFHKNDDSSQSFILGGYIT 376
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,911,740
Number of Sequences: 1657284
Number of extensions: 12389686
Number of successful extensions: 46999
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 44270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46967
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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