Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20927
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    27   0.19 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    25   0.57 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 266 FVSRLRSEGDVTAPVASPAQHDAGKPVPA 352
           FV +++ E D T+P+ +P  + A  P P+
Sbjct: 4   FVRQVKQEADSTSPLLTPPHNPAYSPPPS 32


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 299 TAPVASPAQHDAGKPV 346
           T  +A PAQHD G PV
Sbjct: 263 TFQLADPAQHDLGAPV 278


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 130 KPLPKDICERGGWPRLAASNLSRCNSLGVR 41
           +P+   +  R G     A  +SRCN++GVR
Sbjct: 79  QPVSYILNTRSGDEAALADMISRCNAVGVR 108


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 130 KPLPKDICERGGWPRLAASNLSRCNSLGVR 41
           +P+   +  R G     A  +SRCN++GVR
Sbjct: 80  QPVSYILNTRSGDETALADMISRCNAVGVR 109


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 130 KPLPKDICERGGWPRLAASNLSRCNSLGVR 41
           +P+   +  R G     A  +SRCN++GVR
Sbjct: 80  QPVSYILNTRSGDEAALADMISRCNAVGVR 109


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 157 DDEDIVELPKPLPKDICE 104
           DDED +E P P+   + E
Sbjct: 479 DDEDAIEKPAPVKISVQE 496


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 73  WRRPNVASRRAHRCPS 120
           +R P+  +  AH CPS
Sbjct: 335 FRMPHKCNGNAHNCPS 350


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 73  WRRPNVASRRAHRCPS 120
           +R P+  +  AH CPS
Sbjct: 342 FRMPHKCNGNAHNCPS 357


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 231 WQNDPLYEYLWPVSLESS 178
           WQN  + ++LW   L +S
Sbjct: 183 WQNKVIQKFLWTGGLVTS 200


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 231 WQNDPLYEYLWPVSLESS 178
           WQN  + ++LW   L +S
Sbjct: 416 WQNKVIQKFLWTGGLVTS 433


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 231 WQNDPLYEYLWPVSLESS 178
           WQN  + ++LW   L +S
Sbjct: 416 WQNKVIQKFLWTGGLVTS 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,036
Number of Sequences: 336
Number of extensions: 2594
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)