Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20927
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    26   0.95 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    26   1.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.7  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   6.7  
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    23   6.7  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    23   6.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.7  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   8.8  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   8.8  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 55  SCSVRDWRRPNVASRRAHRC 114
           SC VR+  +P+  SRR  RC
Sbjct: 220 SCKVREAPKPSAESRRCFRC 239


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +2

Query: 500 NKDRDRYSCRPIQTWTKKRSARPA*LG*SRLNAPSRCTATSESSSGGW 643
           N   DRY   P  TW  + S R   +G       S  T  S SSS G+
Sbjct: 660 NGPADRYYTDPCATWRYEESPRKPDVG---AGTASAGTTNSTSSSSGY 704


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 546  QRSVPLDRRDWAEAGSTPLPDAQRRRSPQVEAGHY 650
            QRS P  +R   +AG   +PD    R   ++   Y
Sbjct: 1092 QRSTPTPQRSHTQAGPRVVPDPAHARPCDLKTDLY 1126


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 287 EGDVTAPVASPAQHDAGKPVPADHKDVH 370
           EGD TAP+  P +   G  V    K  H
Sbjct: 264 EGDYTAPIYEPTERVVGNNVDDKVKAWH 291


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 142 VELPKPLPKDICERGGW 92
           V   +P  KD+CER  W
Sbjct: 125 VRCTRPKGKDVCERAFW 141


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 142 VELPKPLPKDICERGGW 92
           V   +P  KD+CER  W
Sbjct: 125 VRCTRPKGKDVCERAFW 141


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 52  RSCSVRDWRRPNVASRRAHR 111
           R  S R WR P+VA+   HR
Sbjct: 193 RDDSARGWRVPDVATLSDHR 212


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
          responsive shortpeptide protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 79 ASNLSRCNSLGVRACG 32
          A   +RC S+G R CG
Sbjct: 26 APTCARCKSIGARYCG 41


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = +2

Query: 140 DDVLVVSI*IYCREDSNDTGQRYSYSGSFCHEARQPRHNADSFVSRLRSEGDVTAPVASP 319
           D   ++S+  YCR+  N    +YS + +  H       N  S VS    +     P   P
Sbjct: 104 DFATLMSVATYCRDRLNPVLFQYSLAVAVQHREDTKDVNIPSIVSLFPDQ--FVDPAVFP 161

Query: 320 AQHDAGKPVPADHKDV 367
              + G  V  +++ V
Sbjct: 162 KLREEGAAVQQENRMV 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,753
Number of Sequences: 2352
Number of extensions: 12022
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)