Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20927
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    27   0.16 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   3.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   8.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   8.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   8.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 639 PPLEDSDVAV-HREGALSLLQPNHAGRAERFFVHVW 535
           PP+  S   V H+E AL  L+P++  +   +  HVW
Sbjct: 392 PPISGSATPVFHQEMALYYLKPSYDAQEPAWKTHVW 427


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 300 VTSPSLRSRDTNESALCRGCRASWQNDPLYE 208
           V  P    R++ ESA+C   + +    PLY+
Sbjct: 177 VEYPQNSKRNSEESAICAMLKENMPEFPLYQ 207


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 401 AGRDGDIQTFELSGLLTLRISNEQFGRI 484
           A +D DI TF +      RI +  FG+I
Sbjct: 83  AAKDADILTFVVPHQFIKRICSALFGKI 110


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 293 HPRCGVGTRTSPRC 252
           HP  G G RT  RC
Sbjct: 128 HPVTGCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 293 HPRCGVGTRTSPRC 252
           HP  G G RT  RC
Sbjct: 133 HPVTGCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 293 HPRCGVGTRTSPRC 252
           HP  G G RT  RC
Sbjct: 133 HPVTGCGERTEGRC 146


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -3

Query: 293 HPRCGVGTRTSPRCAAAAELHG 228
           HPRC V     P      EL G
Sbjct: 153 HPRCAVNNYNDPSNVRNCELVG 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,845
Number of Sequences: 438
Number of extensions: 3124
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)