BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20926 (674 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 157 2e-38 AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 157 2e-38 AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 157 2e-38 D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 151 8e-37 BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 30 3.3 AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 30 3.3 AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 30 3.3 AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 7.7 AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 7.7 AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 7.7 >BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p protein. Length = 261 Score = 157 bits (380), Expect = 2e-38 Identities = 71/86 (82%), Positives = 79/86 (91%) Frame = +3 Query: 3 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182 LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68 Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIRR 260 L+KVDGKVRTDPTYPAG+MDV+++ + Sbjct: 69 LVKVDGKVRTDPTYPAGYMDVITLEK 94 Score = 142 bits (343), Expect = 5e-34 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 257 KTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPL 436 KT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPL Sbjct: 94 KTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPL 153 Query: 437 IKVNDSIQLDIATTKIMDFIKFESG 511 I NDS+Q+DIA+ KI D+IKF+SG Sbjct: 154 IHANDSVQVDIASGKITDYIKFDSG 178 Score = 108 bits (259), Expect = 8e-24 Identities = 48/53 (90%), Positives = 50/53 (94%) Frame = +1 Query: 511 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 669 NLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG Sbjct: 179 NLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKG 231 >AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB, isoform B protein. Length = 261 Score = 157 bits (380), Expect = 2e-38 Identities = 71/86 (82%), Positives = 79/86 (91%) Frame = +3 Query: 3 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182 LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68 Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIRR 260 L+KVDGKVRTDPTYPAG+MDV+++ + Sbjct: 69 LVKVDGKVRTDPTYPAGYMDVITLEK 94 Score = 142 bits (343), Expect = 5e-34 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 257 KTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPL 436 KT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPL Sbjct: 94 KTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPL 153 Query: 437 IKVNDSIQLDIATTKIMDFIKFESG 511 I NDS+Q+DIA+ KI D+IKF+SG Sbjct: 154 IHANDSVQVDIASGKITDYIKFDSG 178 Score = 108 bits (259), Expect = 8e-24 Identities = 48/53 (90%), Positives = 50/53 (94%) Frame = +1 Query: 511 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 669 NLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG Sbjct: 179 NLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKG 231 >AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA, isoform A protein. Length = 261 Score = 157 bits (380), Expect = 2e-38 Identities = 71/86 (82%), Positives = 79/86 (91%) Frame = +3 Query: 3 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182 LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68 Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIRR 260 L+KVDGKVRTDPTYPAG+MDV+++ + Sbjct: 69 LVKVDGKVRTDPTYPAGYMDVITLEK 94 Score = 142 bits (343), Expect = 5e-34 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 257 KTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPL 436 KT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPL Sbjct: 94 KTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPL 153 Query: 437 IKVNDSIQLDIATTKIMDFIKFESG 511 I NDS+Q+DIA+ KI D+IKF+SG Sbjct: 154 IHANDSVQVDIASGKITDYIKFDSG 178 Score = 108 bits (259), Expect = 8e-24 Identities = 48/53 (90%), Positives = 50/53 (94%) Frame = +1 Query: 511 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 669 NLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG Sbjct: 179 NLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKG 231 >D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein S4 protein. Length = 261 Score = 151 bits (366), Expect = 8e-37 Identities = 69/86 (80%), Positives = 77/86 (89%) Frame = +3 Query: 3 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182 LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV QR Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQR 68 Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIRR 260 L+KV GKVRTDPTYPAG+MDV+++ + Sbjct: 69 LVKVYGKVRTDPTYPAGYMDVITLEK 94 Score = 142 bits (343), Expect = 5e-34 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 257 KTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPL 436 KT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPL Sbjct: 94 KTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPL 153 Query: 437 IKVNDSIQLDIATTKIMDFIKFESG 511 I NDS+Q+DIA+ KI D+IKF+SG Sbjct: 154 IHANDSVQVDIASGKITDYIKFDSG 178 Score = 108 bits (259), Expect = 8e-24 Identities = 48/53 (90%), Positives = 50/53 (94%) Frame = +1 Query: 511 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 669 NLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG Sbjct: 179 NLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKG 231 >BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p protein. Length = 1098 Score = 29.9 bits (64), Expect = 3.3 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 14 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 190 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611 >AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p protein. Length = 561 Score = 29.9 bits (64), Expect = 3.3 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 14 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 190 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74 >AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA protein. Length = 1098 Score = 29.9 bits (64), Expect = 3.3 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 14 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 190 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611 >AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B protein. Length = 2077 Score = 28.7 bits (61), Expect = 7.7 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -2 Query: 415 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 257 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942 >AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF, isoform F protein. Length = 2077 Score = 28.7 bits (61), Expect = 7.7 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -2 Query: 415 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 257 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942 >AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE, isoform E protein. Length = 2077 Score = 28.7 bits (61), Expect = 7.7 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -2 Query: 415 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 257 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 35,137,651 Number of Sequences: 53049 Number of extensions: 814447 Number of successful extensions: 2517 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2514 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2930645700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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