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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20925
         (546 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39921| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.27 
SB_43651| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)                  31   0.81 
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)              30   1.4  
SB_22833| Best HMM Match : ATP-synt_8 (HMM E-Value=5.9)                30   1.4  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_22050| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)                      29   2.5  
SB_20444| Best HMM Match : F-box (HMM E-Value=5.2)                     29   2.5  
SB_51094| Best HMM Match : VWA (HMM E-Value=0)                         25   3.4  
SB_15843| Best HMM Match : VWA (HMM E-Value=4.1e-35)                   25   3.6  
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)                 28   4.3  
SB_25690| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.3  
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)          28   5.7  
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)          28   5.7  
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)                  28   5.7  
SB_7889| Best HMM Match : VWC (HMM E-Value=2.6)                        28   5.7  

>SB_39921| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 210

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 127 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           T     T   P+++ A P+ + A PE + A PE++   P+
Sbjct: 26  TAAPMETTAAPDATTAAPDATTAAPEATTAAPEATTAAPE 65



 Score = 31.9 bits (69), Expect = 0.35
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 127 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCP 243
           T     T   P+++ A PE + A PE + A PE++   P
Sbjct: 33  TAAPDATTAAPDATTAAPEATTAAPEATTAAPEATTAAP 71



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 127 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCP 243
           T     T   PE++ A PE + A PE + A P  +   P
Sbjct: 40  TAAPDATTAAPEATTAAPEATTAAPEATTAAPVETTAGP 78


>SB_43651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 274

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE + A PE +   PE +  CPE +   P+
Sbjct: 84  EGNSTSPEGNSASPEGNSTSPEGNSTCPEGNSTSPE 119



 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE + A PE + A PE + A PE +   P+
Sbjct: 133 EGNSTSPEGNSASPEGNSASPEGNSASPEGNSTSPE 168



 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE +  CPE +   PE +   PE +   P+
Sbjct: 98  EGNSTSPEGNSTCPEGNSTSPEGNSTSPEGNSTSPE 133



 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   TCPE +   PE +   PE +   PE +   P+
Sbjct: 105 EGNSTCPEGNSTSPEGNSTSPEGNSTSPEGNSTSPE 140



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 136 SQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           ++   T PE + A PE +   PE + A PE +   P+
Sbjct: 69  TEGNSTSPEGNSASPEGNSTSPEGNSASPEGNSTSPE 105



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +     PE +   PE + A PE +   PE +  CP+
Sbjct: 77  EGNSASPEGNSTSPEGNSASPEGNSTSPEGNSTCPE 112



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE + A PE +   PE + A PE +   P+
Sbjct: 10  EGNSTSPEGNSASPEGNSTSPEGNSASPEGNSTSPE 45



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE +   PE + A PE + A PE +   P+
Sbjct: 126 EGNSTSPEGNSTSPEGNSASPEGNSASPEGNSASPE 161



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE + A PE +   PE + A PE +   P+
Sbjct: 196 EGNSTSPEGNSASPEGNSTSPEGNSASPEGNSTSPE 231



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 139 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 246
           +   T PE + A PE +   PE + A PE +   P+
Sbjct: 210 EGNSTSPEGNSASPEGNSTSPEGNSASPEGNSTSPE 245


>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
          Length = 1536

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 130  CVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQT 249
            C++ N   C + +  C + +  C   S  CP+ S LCP +
Sbjct: 991  CLNDNV-MCLKDNVMCSKDAVTCQNRSVTCPKYSVLCPDS 1029



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 130  CVSQNTGTCPESSCACPEISCACPETSCACPESS 231
            C+  N   C + +  C   S  CP+ S  CP+S+
Sbjct: 998  CLKDNV-MCSKDAVTCQNRSVTCPKYSVLCPDSN 1030



 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 136  SQNTGTCPESSCACPEISCACPETSCACPESS 231
            S++  TC   S  CP+ S  CP+++    E+S
Sbjct: 1006 SKDAVTCQNRSVTCPKYSVLCPDSNVEPNETS 1037


>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
          Length = 1250

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
 Frame = +1

Query: 127 TCVSQNTGTCPES-----SCACPEISCACPETSCACPESSCLCPQT 249
           T V  N GTC  +     SC      C  P  SC  P   C C QT
Sbjct: 40  TTVESNGGTCTYALNETKSCGSDNGGCTGPGASCDEPTGVCSCNQT 85


>SB_22833| Best HMM Match : ATP-synt_8 (HMM E-Value=5.9)
          Length = 117

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLCP 243
           CP +  ACP     CP T   CP +   CP
Sbjct: 4   CPLTLLACPLTLFTCPLTPFTCPLTPFTCP 33



 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 151 TCPESSCACPEISCACPETSCACPESSCLCP 243
           TCP +   CP     CP T   CP     CP
Sbjct: 24  TCPLTPFTCPLPPFTCPLTLLTCPLDMLSCP 54



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLCPQT 249
           CP +   CP     CP T   CP     CP T
Sbjct: 11  CPLTLFTCPLTPFTCPLTPFTCPLPPFTCPLT 42



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 172 ACPEISCACPETSCACPESSCLCPQT 249
           ACP    ACP T   CP +   CP T
Sbjct: 3   ACPLTLLACPLTLFTCPLTPFTCPLT 28



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 151 TCPESSCACPEISCACPETSCACPESSCLCP 243
           TCP +   CP     CP     CP +   CP
Sbjct: 17  TCPLTPFTCPLTPFTCPLPPFTCPLTLLTCP 47


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 160  ESSCACPEISCACPETSC---ACPESSCLCPQTCS 255
            E S +CP+I     + SC    C E S  CPQ CS
Sbjct: 1282 EHSQSCPKICFTSCKPSCPVHCCSEHSNACPQECS 1316



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +1

Query: 151  TCPESSCA--CPEISCACPETSCACPESSCLCPQTC 252
            TC   SC   CP I C+    +C+       CP  C
Sbjct: 1672 TCSPDSCRPECPLICCSVCPPNCSAQSCGNFCPPKC 1707


>SB_22050| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 130 CVSQNTGTCPESSCACPEISCACPETSC 213
           CVS      P  + ACP ++ AC   SC
Sbjct: 80  CVSYRYDRVPYLTSACPNVTSACQRVSC 107


>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
          Length = 451

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 151 TCPESSCACPEISCACPETSCACPESSCLCPQTC 252
           +C  + C+C  +  +C    C+C  + C C   C
Sbjct: 145 SCRVACCSCRVVCYSCRVACCSCRVACCSCRVVC 178



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 151 TCPESSCACPEISCACPETSCACPESSCLCPQTC 252
           +C  + C+C  +  +C    C+C  + C C   C
Sbjct: 187 SCRVACCSCRVVCYSCRVVFCSCRVACCSCRVVC 220



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 151 TCPESSCACPEISCACPETSCACPESSCLCPQTC 252
           +C  + C+C  +  +C    C+C  + C C   C
Sbjct: 124 SCRIACCSCRVVCYSCRVVFCSCRVACCSCRVVC 157


>SB_20444| Best HMM Match : F-box (HMM E-Value=5.2)
          Length = 332

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLCP 243
           CP +    P   C CP      P   CLCP
Sbjct: 60  CPSAFALLPLPYCLCPNAFALLPLPYCLCP 89



 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLCP 243
           CP +    P   C CP      P   CLCP
Sbjct: 74  CPNAFALLPLPYCLCPSAFALLPLPYCLCP 103


>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3544

 Score = 24.6 bits (51), Expect(2) = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 139  QNTGTCPESSCACP 180
            Q+ G C ES C CP
Sbjct: 1524 QHGGVCTESGCMCP 1537



 Score = 22.2 bits (45), Expect(2) = 3.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 217  CPESSCLCPQT 249
            C ES C+CP +
Sbjct: 1529 CTESGCMCPSS 1539


>SB_15843| Best HMM Match : VWA (HMM E-Value=4.1e-35)
          Length = 1686

 Score = 24.6 bits (51), Expect(2) = 3.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 139  QNTGTCPESSCACP 180
            Q+ G C ES C CP
Sbjct: 1266 QHGGVCTESGCMCP 1279



 Score = 22.2 bits (45), Expect(2) = 3.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 217  CPESSCLCPQT 249
            C ES C+CP +
Sbjct: 1271 CTESGCMCPSS 1281


>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
          Length = 1421

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 130 CVSQNTGTCPESSCACPEISCACPETSCAC 219
           C   +TG  P ++C C  I    P+T+C C
Sbjct: 892 CCLMDTGL-PHTACQCCLIGTGLPQTACQC 920



 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
 Frame = +1

Query: 130  CVSQNTGTCPESSCACPEISCACPETSCAC-------PESSCLC 240
            C   +TG  P ++C C  I    P T+C C       P ++C C
Sbjct: 962  CRLMDTGL-PHTACQCRLIDTGLPHTACQCRLMDTGIPHTACQC 1004



 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
 Frame = +1

Query: 130  CVSQNTGTCPESSCACPEISCACPETSCAC-------PESSCLC 240
            C   +TG  P ++C C  I    P T+C C       P ++C C
Sbjct: 1004 CRLMDTGL-PHTACQCRLIDTGLPHTACQCRLMDTGLPHTACQC 1046


>SB_25690| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = +1

Query: 148 GTCPES---SCACPEISCA----CPETSCACPESSCLCPQTC 252
           G CP S   SCA PE SCA    CP     C      C ++C
Sbjct: 103 GKCPPSPPPSCADPEDSCALDSDCPGDGQKCCAGGAGCGRSC 144


>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
          Length = 351

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 160 ESSCACPEISCACPETSCACPESSCLCPQTCS 255
           E +CAC      CP+  C  P   C     C+
Sbjct: 69  ERNCACRSAEFKCPDGKCVHPSKFCNGESDCT 100


>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
          Length = 147

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 160 ESSCACPEISCACPETSCACPESSCLCPQTCS 255
           E +CAC      CP+  C  P   C     C+
Sbjct: 69  ERNCACRSAEFKCPDGKCVHPSKFCNGESDCT 100


>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLCPQ 246
           C    CA   + CA P   CA P   C  P+
Sbjct: 830 CTSVICAISHVICAIPCMMCAIPRVICAIPR 860


>SB_7889| Best HMM Match : VWC (HMM E-Value=2.6)
          Length = 203

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 154 CPESSCACPEISCACPETSCACPESSCLC 240
           CP+    CPE          A PES+C C
Sbjct: 31  CPQMMIKCPENQRVAYHEGPAVPESTCTC 59


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,168,177
Number of Sequences: 59808
Number of extensions: 75949
Number of successful extensions: 562
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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