Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20924
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.31 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 339 VLVTGLFMLENMTKPLL-YTMKQLKHAPQTVLSILLHFTKTALLVMKNEKCGNKLKKMHF 515
           +L   LF+L+N+ KP++ +  K +K    T+    + F +    +    K  +KLKKM +
Sbjct: 115 LLKHNLFLLDNIVKPIIAFYYKPIK----TLNGHEIKFIRKEEYISFESKVFHKLKKMKY 170

Query: 516 CIKT*RKVR 542
            ++   +V+
Sbjct: 171 LVEVQDEVK 179


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 14  VAKFFKTIKQY*LSYLRTNVRFNVCL 91
           V  FFK    Y  +Y+  N+ F +CL
Sbjct: 179 VEHFFKKQFHYIFTYMPYNIVFGLCL 204


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 298 LSSVFFIIQRYCRFCLSSDAFFFS 227
           L+ +  I+QRYC   L    +FF+
Sbjct: 66  LAKITTILQRYCSVLLVFLTYFFN 89


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 298 LSSVFFIIQRYCRFCLSSDAFFFS 227
           L+ +  I+QRYC   L    +FF+
Sbjct: 62  LAKITTILQRYCSVLLVFLTYFFN 85


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 517 QKCIFFNLFPHFSFFIT 467
           Q+C+ +N+FP ++  +T
Sbjct: 202 QQCVTYNVFPTYAHELT 218


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 517 QKCIFFNLFPHFSFFIT 467
           Q+C+ +N+FP ++  +T
Sbjct: 202 QQCVTYNVFPTYAHELT 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,549
Number of Sequences: 336
Number of extensions: 4428
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)