Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20921
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 138 1e-32
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 138 1e-32
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 138 1e-32
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 138 1e-32
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 137 2e-32
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 136 4e-32
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 135 1e-31
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 130 4e-30
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 43 7e-04
AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens ... 31 3.2
DQ148484-1|AAZ77801.1| 101|Homo sapiens potassium channel inter... 30 5.5
AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens ... 30 5.5
AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens ... 30 7.3
BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E... 29 9.7
AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5... 29 9.7
AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E... 29 9.7
AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E... 29 9.7
AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E... 29 9.7
AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E... 29 9.7
AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens ... 29 9.7
AJ512612-1|CAD54757.1| 925|Homo sapiens ABCA5 transporter protein. 29 9.7
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 9.7
AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette pr... 29 9.7
AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degrad... 29 9.7
AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein. 29 9.7
AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degrad... 29 9.7
AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in ... 29 9.7
AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein. 29 9.7
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 138 bits (335), Expect = 1e-32
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 137 bits (332), Expect = 2e-32
Identities = 65/94 (69%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
G+ ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 91.9 bits (218), Expect = 2e-18
Identities = 43/64 (67%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 136 bits (330), Expect = 4e-32
Identities = 66/94 (70%), Positives = 74/94 (78%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 135 bits (327), Expect = 1e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSF QAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFSQALGITTKISR 149
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 60.5 bits (140), Expect = 5e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 130 bits (314), Expect = 4e-30
Identities = 64/94 (68%), Positives = 74/94 (78%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL +KV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 114
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 115 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 148
Score = 93.1 bits (221), Expect = 7e-19
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 43.2 bits (97), Expect = 7e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3
Query: 546 KPGDKVGASEATLLNMLNISP 608
K GDKVGASEATLLNMLNISP
Sbjct: 2 KTGDKVGASEATLLNMLNISP 22
>AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ43926 fis, clone TESTI4012556. ).
Length = 167
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 287 SRNCCHTSRATLA-SCSPAETSLRSVTNCWSTKSRLQLVPVPL--PHCQSSFPPTTPASV 457
SR+ C SR TL + SP TS R +T S+L++ P P C++ P++ A
Sbjct: 12 SRSSC--SRTTLRPAASPNTTSSRGLTVHPPCSSKLRMDPTPAWPASCEALMGPSSSAGP 69
Query: 458 QRKPLSSKLFPSLP 499
R L + SLP
Sbjct: 70 ARLRLPPRRHSSLP 83
>DQ148484-1|AAZ77801.1| 101|Homo sapiens potassium channel
interacting protein 2 protein.
Length = 101
Score = 30.3 bits (65), Expect = 5.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 290 RNCCHTSRATLASCSPAETSLRSVTNCWSTKSRLQLVPVPLPHCQSSFPPTTPASVQRKP 469
R+C SR + PAE S+R ++ ++ S L+ P P+P S P TP + R
Sbjct: 39 RSCTGASRTNV----PAELSMRRTSSRFTPSSFLKETPAPMPLFSSM--PLTPTMMARSV 92
Query: 470 L 472
L
Sbjct: 93 L 93
>AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ44650 fis, clone BRACE2039607. ).
Length = 182
Score = 30.3 bits (65), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 242 MMRKASKTTWTTIQPSRNCCHTSRATLAS-CSPAETSLRSVTNCWSTKSRLQLVPVPLPH 418
M R+ T T I PSR C ++ LAS C P + +R+ CW +L LV V
Sbjct: 1 MEREEEGGTGTVILPSRKCLSSTSPKLASGCCPWPSRMRACP-CWDAGIQL-LVLVSGGR 58
Query: 419 CQ 424
C+
Sbjct: 59 CR 60
>AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ46148 fis, clone TESTI4000600. ).
Length = 167
Score = 29.9 bits (64), Expect = 7.3
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 287 SRNCCHTSRATLA-SCSPAETSLRSVTNCWSTKSRLQLVPVPL--PHCQSSFPPTTPASV 457
SR+ C SR TL + SP TS R T S+L++ P P C++ P++ A
Sbjct: 12 SRSSC--SRTTLRPAASPNTTSSRGQTVHPPCSSKLRMDPTPAWPASCEALMGPSSSAGP 69
Query: 458 QRKPLSSKLFPSLP 499
R L + SLP
Sbjct: 70 ARLRLPPRRHSSLP 83
>BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E4B
protein.
Length = 1173
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5
protein.
Length = 1642
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 468 LFLPSSFHPYQNFKGTIEIINDVHILKPGDKVGASEATLL 587
+F+ H ++N I+++ D++ LKPGDK + +LL
Sbjct: 877 IFMFLVHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLL 916
>AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ31971 fis, clone NT2RP7008137, weakly similar to
ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 1. ).
Length = 865
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 468 LFLPSSFHPYQNFKGTIEIINDVHILKPGDKVGASEATLL 587
+F+ H ++N I+++ D++ LKPGDK + +LL
Sbjct: 100 IFMFLVHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLL 139
>AJ512612-1|CAD54757.1| 925|Homo sapiens ABCA5 transporter protein.
Length = 925
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 468 LFLPSSFHPYQNFKGTIEIINDVHILKPGDKVGASEATLL 587
+F+ H ++N I+++ D++ LKPGDK + +LL
Sbjct: 877 IFMFLVHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLL 916
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.5 bits (63), Expect = 9.7
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +2
Query: 263 TTWTTIQPSRNCCHTSRATLASCSPAETSLRSV----TNCWSTKSR---LQLVPVPLPHC 421
TT TT P+ + TS AT ++ S TS S T ST S+ L P P+P
Sbjct: 49 TTSTTSAPTTST--TSAATTSTISAPTTSTTSAPTTSTTSASTASKTSGLGTTPSPIPTT 106
Query: 422 QSSFPPTT 445
++ PPTT
Sbjct: 107 STTSPPTT 114
>AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette
protein protein.
Length = 1642
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 468 LFLPSSFHPYQNFKGTIEIINDVHILKPGDKVGASEATLL 587
+F+ H ++N I+++ D++ LKPGDK + +LL
Sbjct: 877 IFMFLVHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLL 916
>AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1173
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein.
Length = 186
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 22 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 67
>AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1302
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in
neuroblastoma-1/UFD2 protein.
Length = 1173
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 599 VQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGMERAWKKEVF 462
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1054 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1099
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,919,239
Number of Sequences: 237096
Number of extensions: 2387097
Number of successful extensions: 6161
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6130
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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