Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20921
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 30 1.5
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.6
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 2.6
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 28 4.5
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 28 4.5
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 4.5
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 27 7.9
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 125 bits (302), Expect = 2e-29
Identities = 59/94 (62%), Positives = 72/94 (76%)
Frame = +1
Query: 229 GKKHYDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGA 408
GK ++++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLE++ APA+ GA
Sbjct: 56 GKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +P NTG+GPEKTSFFQAL IPTKI+R
Sbjct: 116 IAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIAR 149
Score = 78.6 bits (185), Expect = 3e-15
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXXXXXXXXXXXXXXXXVLMGKNTM 244
M RED++TWK+NYF K+++L +EYPKC +VG DNVG +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 245 MRKA 256
+RKA
Sbjct: 61 IRKA 64
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 492 PYQNFKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
P + +GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 144 PTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 SKTTWTTIQPSRNCCHTSRATLASCSPAET-SLRSVTNCWSTKSRLQLVPVPLPHCQSSF 433
S+T + QP+ N R C+P ++S W T S+ +P P P+ +
Sbjct: 286 SRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPGTLPTPAPYVSTQA 345
Query: 434 P 436
P
Sbjct: 346 P 346
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 251 KASKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWSTKSRLQLVPVPLPHCQSS 430
K+S T + N C T + + +C + + WS+++ Q P PLP C+S+
Sbjct: 586 KSSHCTGNPVSIDCNGCPTPKRSGINCDNRMAEVNNQAGRWSSEATSQ--PAPLP-CKSA 642
Query: 431 FPPTTPASVQRKPLS 475
PT +S P S
Sbjct: 643 -NPTEDSSQDAPPTS 656
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 233 KNTMMRKASKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWS--TKSRLQLVPV 406
+ T +AS+ Q +N C ++ + S + S ++ ++C++ T + +Q P
Sbjct: 74 QQTYQIQASQCAPACQQSCQNQCQSAPSVSQCQSTCQQSCQT-SSCYTPTTPAPVQCQPS 132
Query: 407 PLPHCQSSFPPTTPASVQRKP 469
+P C+ S TPA+VQ P
Sbjct: 133 CMPACEQSCVVQTPAAVQCVP 153
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 405 TGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDV--WQQFLEGWIVVQVVFDALRI 244
TG+S LD V Q + + E +A++ +D+ WQ E W +Q + D +R+
Sbjct: 2465 TGSSGVLDPVAVQLTHTRHWLHDVERDASITVDLAQWQPARELWQSIQGIIDEIRL 2520
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 405 TGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDV--WQQFLEGWIVVQVVFDALRI 244
TG+S LD V Q + + E +A++ +D+ WQ E W +Q + D +R+
Sbjct: 2465 TGSSGVLDPVAVQLTHTRHWLHDVERDASITVDLAQWQPARELWQSIQGIIDEIRL 2520
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 405 TGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDV--WQQFLEGWIVVQVVFDALRI 244
TG+S LD V Q + + E +A++ +D+ WQ E W +Q + D +R+
Sbjct: 2465 TGSSGVLDPVAVQLTHTRHWLHDVERDASITVDLAQWQPARELWQSIQGIIDEIRL 2520
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 233 KNTMMRKASKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWS--TKSRLQLVPV 406
+ T +AS+ Q +N C ++ + S + S ++ ++C++ T + +Q P
Sbjct: 74 QQTYQIQASQCAPACQQSCQNQCQSAPSVSQCQSTCQQSCQT-SSCYTPTTPAPVQCQPS 132
Query: 407 PLPHCQSSFPPTTPASVQRKP 469
+P C+ S TPA VQ P
Sbjct: 133 CMPACEQSCVVQTPAPVQCVP 153
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEHKVQAPARPGAIAPLSVVIP 435
L K +KG G +FT EV + E + AR G +A +VV+P
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLP 139
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 401 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQ---GYY 517
P+P P Q S T A Q P + P + +FQ GYY
Sbjct: 386 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYY 427
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 401 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQ---GYY 517
P+P P Q S T A Q P + P + +FQ GYY
Sbjct: 770 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYY 811
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 401 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQ---GYY 517
P+P P Q S T A Q P + P + +FQ GYY
Sbjct: 749 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYY 790
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 401 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQ---GYY 517
P+P P Q S T A Q P + P + +FQ GYY
Sbjct: 749 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYY 790
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 20 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 133
L+ K S ++ +SR+ +EDK + SN+++K QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 305 TSRATLASCSPAETSLRSVTNCWSTKSRLQLVPVPLPHCQSSFPPT 442
TS + + P+ LR S + +LVP LP SS PPT
Sbjct: 81 TSNSQMIQSQPSPRVLRRTVKMASPAVQRRLVPQNLPTSSSSRPPT 126
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 428 TTDNGAMAPGRAGAWTLCSNSLSRTSTRSPRVNTKPT 318
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 389 LQLVPVPLPHCQSSFPPTTPASVQRKPL 472
L + P P S PPT P S RKP+
Sbjct: 377 LSTLATPSPVPSPSVPPTAPPSTPRKPM 404
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 371 WSTKSRLQLVPVPLP--HCQSSFPPTTPASVQRKP 469
W+ + LQ P+P P +SSF P P VQ+ P
Sbjct: 273 WTPPTLLQPNPIPPPPQRNESSFDPYIPIGVQQPP 307
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 317 TLASCSPAETSLRSVTNCWSTKSRLQL-VPVPL-PHCQSSFPPTTPASVQRKPLSSKLFP 490
T+ S P ++ T+S + L + VP P + FPP TP + P ++ L
Sbjct: 451 TVVSSEPNHIDFSAINQLSHTQSPVNLQIRVPQQPLGAAGFPPVTPGLFENNPQNTDLAD 510
Query: 491 SLPKF 505
L F
Sbjct: 511 LLQNF 515
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,380,391
Number of Sequences: 27780
Number of extensions: 336289
Number of successful extensions: 1109
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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