Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20919
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 187 ILVSYAQLNRTFYVTT 140
           +L+ Y  LN+ FYV T
Sbjct: 590 VLLRYPDLNKIFYVQT 605


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 132 KRYCILNDYITII 94
           +R+ ILN+Y+TI+
Sbjct: 181 RRFTILNNYLTIV 193


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 190 LILVSYAQLNRTFYVTTRFEKILYLKRL 107
           LIL  Y Q + T    T+ + +LY K++
Sbjct: 64  LILAKYRQQDVTLLQITKAKNLLYSKQI 91


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 132 KRYCILNDYITII 94
           +R+ ILN+Y+TI+
Sbjct: 177 RRFTILNNYLTIV 189


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 77 DRQLKMICLEKKNLIILSKTTEW 9
          DR +   C EK N + +S   +W
Sbjct: 7  DRLMTQRCKEKLNTLAISVMNQW 29


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 617 CLGISLSLCLFYYQLISLALCY 552
           CLG +++  ++Y+Q+   A  Y
Sbjct: 328 CLGGTITRTMWYFQICGSAFSY 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,533
Number of Sequences: 336
Number of extensions: 3791
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)