Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20919
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 7e-33
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 5e-24
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 107 1e-23
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 98 7e-21
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 98 7e-21
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 97 1e-20
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 97 1e-20
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 92 3e-19
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 91 6e-19
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 91 6e-19
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 91 1e-18
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 88 7e-18
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 81 6e-16
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 75 7e-14
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 64 1e-10
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 64 1e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 62 3e-10
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 62 5e-10
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 59 4e-09
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 58 9e-09
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 56 3e-08
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 56 3e-08
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 54 1e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 52 3e-07
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 52 4e-07
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 50 2e-06
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 48 1e-05
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 47 2e-05
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 47 2e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 46 4e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 45 7e-05
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 43 3e-04
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 40 0.003
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 40 0.003
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 39 0.003
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 39 0.003
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 38 0.010
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 37 0.013
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 37 0.018
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 36 0.024
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.031
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 36 0.031
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 36 0.031
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 36 0.031
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 35 0.054
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 35 0.072
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.072
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 34 0.095
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 34 0.13
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 34 0.13
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.67
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 31 0.89
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 31 1.2
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 30 1.5
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 30 2.0
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 3.6
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_54213| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 28 8.3
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 137 bits (332), Expect = 7e-33
Identities = 62/80 (77%), Positives = 71/80 (88%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
+LVG+A VGKTCLVR+FT+G FPP QG TIGVDF IKTV+VDGEKVKLQIWDTAGQERFR
Sbjct: 11 ILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFR 70
Query: 435 SITQSYYRSAHALILVYDIS 494
SITQSYY +A +I+ YDI+
Sbjct: 71 SITQSYYHNADGVIVTYDIT 90
Score = 34.3 bits (75), Expect = 0.095
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 509 DCLPDWLREIEEYANNKVLRILVGNKTDRETER 607
+ LP WL + Y + VL +VGNK+D T R
Sbjct: 96 ESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNR 128
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 110 bits (264), Expect = 1e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
++VG +GVGK+ L+ RFT F P GATIGVDF +KT+ V+G K KL IWDTAGQERFR
Sbjct: 12 LIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFR 71
Query: 435 SITQSYYRSAHALILVYDISCQPT 506
++T SYYR A +ILVYD + + T
Sbjct: 72 TLTPSYYRGAQGVILVYDTNSRET 95
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 509 DCLPDWLREIEEYANNK-VLRILVGNKTDRET 601
D L +WL E+E Y+ K ++++LVGNK D+ +
Sbjct: 97 DKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS 128
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 108 bits (259), Expect = 5e-24
Identities = 49/96 (51%), Positives = 70/96 (72%)
Frame = +3
Query: 219 DRDGRLQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKL 398
+ D + S ++VG+ GVGKT L+RRFT+G F +T+GVD + +++ G++VKL
Sbjct: 3 ENDDNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKL 62
Query: 399 QIWDTAGQERFRSITQSYYRSAHALILVYDISCQPT 506
Q WDTAGQE+FR ITQSYYR+A A+ILV+DI+ + T
Sbjct: 63 QCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGT 98
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTD-RETERSPST-LARIFAQRHGMYFLETSAKEAEN 688
+P WL +++Y N +L++LVGNKTD + R +T A A+ + +LETSAK +N
Sbjct: 102 IPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFEELLYLETSAKWDDN 161
Query: 689 V 691
V
Sbjct: 162 V 162
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 107 bits (256), Expect = 1e-23
Identities = 46/86 (53%), Positives = 66/86 (76%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
+L+G++GVGK+ L+ RF F +TIGVDF I+T+ VDG+ +KLQIWDTAGQERFR
Sbjct: 12 LLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFR 71
Query: 435 SITQSYYRSAHALILVYDISCQPTLI 512
++T +YYRSAH ++L+YD++ T +
Sbjct: 72 TLTTAYYRSAHGIVLIYDVNESETFL 97
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDR-ETERSPSTLARIFAQRHGMYFLETSAKEAENV 691
L WL E+ EYA V ILVGNK D + + A+ FA++ + F+ETSAK++ NV
Sbjct: 99 LSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNV 158
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/84 (50%), Positives = 64/84 (76%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL+G++GVGK+ L+ RFT+ F +TIGV+F ++++V+G+ +K Q+WDTAGQER+R
Sbjct: 16 VLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERYR 75
Query: 435 SITQSYYRSAHALILVYDISCQPT 506
+IT +YYR A +LVYD++ Q T
Sbjct: 76 AITSAYYRGAVGAVLVYDLTKQKT 99
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERS-PSTLARIFAQRHGMYFLETSAKEAE 685
WL E+ E+A+ ++ +LVGNK D + R+ S A+ + HG+ F+E SA +A+
Sbjct: 106 WLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGDEHGLAFIEASALDAK 160
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/87 (48%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGE-KVKLQIWDTAGQERF 431
+L+G++ VGK+ L+R+FT+G F T+GVDF ++ +E+ G+ ++KLQIWDTAGQERF
Sbjct: 17 ILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERF 76
Query: 432 RSITQSYYRSAHALILVYDISCQPTLI 512
RSIT SYYR+ +++YDI+ + + +
Sbjct: 77 RSITYSYYRNTVGCLIIYDITNRDSFV 103
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 521 DWLREIEEYANN-KVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
DW +E ++ +V+ +LVG+K D+E++R ST FA+ H M F+ETSAK N+
Sbjct: 107 DWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFAEAHNMMFIETSAKVLCNI 165
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL G+A VGK+ + R + F +T+GVDF +KT+ VDG+ LQ+WDTAGQERFR
Sbjct: 446 VLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFR 505
Query: 435 SITQSYYRSAHALILVYDISCQPTLI 512
SI +SY+R A ++L+YD++C+ + +
Sbjct: 506 SIAKSYFRKADGVLLLYDVTCETSFL 531
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 497 STYIDCLPDWLREIEEYANNKVLRILVGNKTDRETERSPSTLARI-------FAQRHGMY 655
++++D + DW+ IEE + V +L GNK D + I A+ HG
Sbjct: 528 TSFLD-VRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKTVITAESGSRLAKEHGAL 586
Query: 656 FLETSAKEAENV 691
F+ETS+KE +N+
Sbjct: 587 FIETSSKENKNI 598
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 97.1 bits (231), Expect = 1e-20
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V +G++GVGK+ + RF + P ATIGVDF IKT+ V+G+ + +Q+WDTAGQERFR
Sbjct: 900 VFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQERFR 959
Query: 435 SITQSYYRSAHALILVYDISCQ 500
SIT+ Y+R A +++ YD++ +
Sbjct: 960 SITKQYFRKADGILIFYDVTAE 981
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTD---RETERSPSTL-ARIFAQRHGMYFLETSAKEA 682
L W+ +EE A V ++++GNKTD E R T+ + A ++ ++ETSAK
Sbjct: 987 LKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTIDGKNLANQYDALYMETSAKTG 1046
Query: 683 ENV 691
N+
Sbjct: 1047 NNI 1049
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/81 (53%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
+++G++ VGKTCL R G FP TIGVDF K++E++GE VKLQ+WDTAGQERFR
Sbjct: 50 IIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFR 109
Query: 435 -SITQSYYRSAHALILVYDIS 494
S+ YYR+ +A++ +YDI+
Sbjct: 110 KSMVCHYYRNVNAVVFMYDIT 130
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 94.7 bits (225), Expect = 6e-20
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 21/103 (20%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGL---------------------FPPGQGATIGVDFMIKTV 371
+L+G++GVGK+CL+ RF L + +TIGVDF I+T+
Sbjct: 12 LLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIRTI 71
Query: 372 EVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQ 500
E+DG+ +KLQIWDTAGQERFR+IT SYYR AH +I+VYD++ Q
Sbjct: 72 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 114
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAKEAENV 691
WL+EI+ YA V ++LVGNK D T++ T A+ +A+ G+ FLETSAK A NV
Sbjct: 123 WLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNV 179
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 92.3 bits (219), Expect = 3e-19
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +3
Query: 339 TIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTLI 512
TIGVDF I+T+ +DGEKVKLQIWDTAGQERFR+IT +YYR H +I+VYD++ T +
Sbjct: 9 TIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFV 66
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
WL EI++ ++ V+RILVGNK D +++ T + F ++ + ETSAKE NV
Sbjct: 71 WLHEIDQNCDD-VIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSAKENINV 126
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 91.5 bits (217), Expect = 6e-19
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL+G AGVGKT L R + F PG+ TIG+D K V++ ++V L +WDTAG ERFR
Sbjct: 15 VLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVERFR 74
Query: 435 SITQSYYRSAHALILVYDISCQPTLIVYL 521
++T++YYR AHA IL++++ P + YL
Sbjct: 75 TVTKNYYRGAHACILMFNVD-DPGSLQYL 102
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
+++GN+ VGKT + R+ F +T+G+DF +KTV + ++VKLQIWDTAGQER+R
Sbjct: 25 LIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYR 84
Query: 435 SITQSYYRSAHALILVYDIS 494
+IT +YYR A IL+YDI+
Sbjct: 85 TITTAYYRGAMGFILMYDIT 104
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL+G + VGK+ LV RF +G F Q +TIG F+ +TV +D VK +IWDTAGQER+
Sbjct: 25 VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYH 84
Query: 435 SITQSYYRSAHALILVYDISCQPT 506
S+ YYR A A I+VYDI+ Q T
Sbjct: 85 SLAPMYYRGAQAAIVVYDITNQDT 108
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
W++E++ A+ ++ L GNK D ++R A+ +A+ +G+ F+ETSAK A NV
Sbjct: 115 WVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQSYAEDNGLLFMETSAKTAMNV 171
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 88.2 bits (209), Expect = 6e-18
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V +G+ GVGK+ L RF +F TIG+DFM KTV +D +V+LQIWDTAGQERFR
Sbjct: 167 VFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFR 226
Query: 435 SITQSYYRSAHALILVYDIS 494
+ SY R + A ++V+DI+
Sbjct: 227 CLIHSYIRDSEAALIVFDIT 246
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 500 TYIDCLPDWLREIEEYANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAK 676
T + + DW++ + + K + I+VGNK D R S +A A+R G+ ++ETSAK
Sbjct: 249 TSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERLGLSYVETSAK 308
Query: 677 EAENV 691
NV
Sbjct: 309 SGYNV 313
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/80 (46%), Positives = 59/80 (73%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
+++G+ VGK+ L+RRF F TIGVDF I ++DG+KVKLQ+WDTAG+E++R
Sbjct: 14 LVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEKYR 73
Query: 435 SITQSYYRSAHALILVYDIS 494
++++S++R A +LV+D+S
Sbjct: 74 ALSRSFFRGADGALLVFDVS 93
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPSTLARIFAQRHGMYFLETSAKEAENV 691
WL E + + + + ILVGNK D++ ++ + + + + +LETSAK+ NV
Sbjct: 105 WLHEFHKVSGSDTITILVGNKCDKKDKKVSEEDIQNLSSCYNLSWLETSAKDNTNV 160
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +3
Query: 252 SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERF 431
+ L + GVGK+ L+ RF G F TIGV+F+ K V++DGE LQIWDTAGQERF
Sbjct: 214 NTLSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERF 273
Query: 432 RSITQSYYRSAHALILVYDI 491
+S+ +YR + +LVY +
Sbjct: 274 KSLRTPFYRGSDLCLLVYAV 293
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3
Query: 339 TIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPT 506
TIGV+F K V V G+ VKLQIWDTAGQERFRS+T+SYYR A +LVYDIS + T
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRET 182
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
L +WL + A+ ++ ILVGNK D + +R + L A FAQ + + FLETSA ENV
Sbjct: 186 LTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENV 245
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 74.9 bits (176), Expect = 5e-14
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVE-VDGEKVKLQIWDTAGQERF 431
++VG+ GK V+R+ ++ P TIGVDF +KT++ ++LQIW AGQERF
Sbjct: 22 LVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQERF 81
Query: 432 RSITQSYYRSAHALILVYDISCQPTL 509
S+T+ YY+ A A ++++D+ Q TL
Sbjct: 82 SSMTRVYYKGADACVVLFDLERQTTL 107
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 74.5 bits (175), Expect = 7e-14
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 11/95 (11%)
Frame = +3
Query: 261 VGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTV-----------EVDGEKVKLQIW 407
+G++GVGKT L+ ++T F P TIG+DF K V G+++ LQ+W
Sbjct: 112 LGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIHLQLW 171
Query: 408 DTAGQERFRSITQSYYRSAHALILVYDISCQPTLI 512
DTAGQERFRS+T +++R A +LV+D++ + + +
Sbjct: 172 DTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFV 206
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 554 NKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
N +L+GNK D E +R AR A G+ + ETSA +NV
Sbjct: 465 NVTSAVLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 511
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 384 EKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDIS 494
+ VKLQIWDTAGQERFR+ITQSYYRS + +I+ YDI+
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDIT 129
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPSTLARI-FAQRHGMY-FLETSAKEAENV 691
W ++++YA +++LVGNK D E ER S + A +GM LETSAK+A N+
Sbjct: 140 WGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNI 197
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 SVLVGNAGVGKTCLVRRFTQGLFP-PGQGATIGV-DFMIKTVEVDGEKVKLQIWDTAGQE 425
++++GN+GVGK+CLV + F +T+ + D + D +K+KL I DTAGQE
Sbjct: 353 TLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQE 412
Query: 426 RFRSITQSYYRSAHALILVYDISCQPTLI 512
R+ SI +Y+R + LV+DI+ + T +
Sbjct: 413 RYFSILPAYFRGVQGVFLVFDITVEITFL 441
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 548 ANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAKEAENV 691
A++ + ILVGNK D E R+ + + A+ FA +G ++ETSAK+ +++
Sbjct: 456 ADSNIQLILVGNKKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKDVDSL 504
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +3
Query: 381 GEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDIS 494
G+K+KLQIWDTAGQERF +IT +YYR A ++LVYD++
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVT 39
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAKEAENV 691
WL++I+++AN V R+LVGNK D +R S T A +G+ F+ETSA NV
Sbjct: 50 WLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINV 106
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +3
Query: 216 GDRDGRLQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVK 395
G +D VL+G++GVGK+ L+ RFT+ F +TIGV+F ++++VDG+ +K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 396 LQIWDT 413
QIWDT
Sbjct: 62 AQIWDT 67
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTA 416
VL+G++GVGK+ L+ R+T+ F G ATIGV+ + VE++G+ V+ QIWDTA
Sbjct: 22 VLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +3
Query: 261 VGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSI 440
VG+ G GKT V+R G F AT+GV+ +K +WDTAGQE+F +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 441 TQSYYRSAHALILVYDISCQPT 506
YY I+++D++ + T
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVT 119
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 237 QVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTA 416
Q+ I +LVG++ GKT L+ + + F AT+ + + VEVDGE+++L +WDT+
Sbjct: 230 QIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTS 288
Query: 417 GQERFRSITQSYYRSAHALILVYDIS 494
G E + + Y + +++ +DIS
Sbjct: 289 GHEDYDHVRPLSYNNVDIVLICFDIS 314
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V+VG+ GKTCL+ F++ FP T+ ++ + +EVDG++V+L +WDTAGQE +
Sbjct: 5933 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYD 5991
Query: 435 SITQSYYRSAHALILVYDISCQPTL 509
+ Y +++ + I +L
Sbjct: 5992 RLRPLSYPDTDVILMCFSIDSPDSL 6016
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V++G+ GVGK+ L +F G F TI DF K +EVD L+I DTAG E+F
Sbjct: 7 VVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTEQFA 65
Query: 435 SITQSYYRSAHALILVYDI 491
S+ Y ++ +LVY +
Sbjct: 66 SMRDLYIKNGQGFLLVYSL 84
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +3
Query: 375 VDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPT 506
V+ + K IWDTAGQERF+S+ YYR A A ILVYDI+ + T
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIEST 47
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 491 ILSTYIDCLPDWLREIEEYANNKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLET 667
I ST+ P W+RE++ Y ++ + GNK D+ +R A+ FA F ET
Sbjct: 44 IESTFHSLRP-WIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAET 102
Query: 668 SAKEAENV 691
SA ++NV
Sbjct: 103 SALTSKNV 110
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVD-FMIKTVEVDGEKVKLQIWDTAGQERFR 434
L G GVGKT + R + FP + + +D I V + +K+K+ +WDT G E +
Sbjct: 13 LCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGMEEYE 72
Query: 435 SITQSYYRSAHALILVYDISCQPTL 509
S+T+++Y ++ +++VY + +L
Sbjct: 73 SLTRNHYSNSKVVLVVYSLDLPDSL 97
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDRETERS-PSTLARIFAQRHGMYFLETSAKEAENV 691
L WL E+E YA+ V ILVGNK D +T+R A+ +A H M F+ETSAK A+NV
Sbjct: 410 LHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNV 469
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3
Query: 405 WDTAGQERFRSITQSYYRSAHALILVYDIS 494
W+ AGQERFR+IT SYYR AH +++VYDI+
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDIT 402
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V+VG GVGK+ L +F Q F TI D K +D L I DTAGQE F
Sbjct: 15 VVVGGGGVGKSALTIQFIQSHFVSDYDPTIE-DSYRKQCVIDERVAHLDILDTAGQEEFS 73
Query: 435 SITQSYYRSAHALILVYDIS 494
++ + Y RS +LV+ ++
Sbjct: 74 AMREQYMRSGEGFLLVFSVT 93
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGE-KVKLQIWDTAGQERF 431
V++G+ GVGKT LV+RF G F T+G D K+V + + L+I DTAG F
Sbjct: 111 VVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAGSYPF 169
Query: 432 RSITQSYYRSAHALILVYDISCQPTL 509
++ + ++A A +LVY + + +L
Sbjct: 170 PAMKKLTIQNADAFVLVYSVDEKASL 195
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 DCLPDWLREIEEYANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAKEAE 685
D + WLR IEE+AN V ++++GNK D + R S A+ HG+ FLETSAK
Sbjct: 141 DNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNI 200
Query: 686 NV 691
N+
Sbjct: 201 NI 202
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLF 320
+L+G++GVGKTC++ RF+ F
Sbjct: 13 LLIGDSGVGKTCILFRFSDDAF 34
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRS 437
++G VGK+ L +F +G F TI F K ++ G++ L++ DTAGQ+ +
Sbjct: 11 VMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDEYSI 69
Query: 438 ITQSYYRSAHALILVYDIS 494
QSY H ILVY ++
Sbjct: 70 FPQSYSMGIHGYILVYAVT 88
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V+VG+ VGKTCL+ +T FP T+ ++ + TV + GE L ++DTAGQE +
Sbjct: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYD 65
Query: 435 SITQSYYRSAHALILVYDI 491
+ Y ++ + +
Sbjct: 66 RLRPLSYPQTDVFLVCFSV 84
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDR--ETERSPSTLARIFAQRHGMYFLETSA 673
+P WL +++E+ +++ +LVGNKTDR + + PS +A +A +G ++ETSA
Sbjct: 64 VPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIETSA 118
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 327 GQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYR 458
G GA +G MI++ +GE ++L +WDTAGQE F +IT++YYR
Sbjct: 16 GNGA-VGKSSMIQSA--NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDRETERS-PSTLARIFAQRHGMYFLETSAKEAENV 691
L W+ E+ ++A++ + IL+GNK+D + R + + FA HGM F+ETSA ++ NV
Sbjct: 34 LNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNV 93
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 420 QERFRSITQSYYRSAHALILVYDIS 494
QER+R+IT +YYR A +LVYDI+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIA 26
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V+VG+ GVGKT L+ + FP T D TVEV+ + ++ DTAGQE F
Sbjct: 22 VIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQEDFD 80
Query: 435 SITQSYYRSAHALILVYDI 491
++ Y SA I+ + +
Sbjct: 81 ALRPLCYSSADVFIVCFSV 99
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +3
Query: 234 LQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDT 413
L +I V VG+ VGKT + T FP G A+I D KT+E+DG++ + + DT
Sbjct: 6 LDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDT 64
Query: 414 AGQERFRSITQSYYRSAHALILVYDIS 494
G R Q +++ A +L +DI+
Sbjct: 65 PGTMHPRIPPQHWFQYASVFLLCFDIA 91
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V+VG+ GVGK+ + T FP G+ D + +DG+ + +WDTAGQE +
Sbjct: 9 VVVGDGGVGKSAFLITATTNAFP-GEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDYD 67
Query: 435 SITQSYYRSAHALILVYDI 491
+ Y ++ +DI
Sbjct: 68 RLRPLSYPMTDVFLVCFDI 86
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 402 IWDTAGQERFRSITQSYYRSAHALILVYDISCQP 503
IWDTAGQERF+S+ ++YR A +LV+D++ QP
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVT-QP 33
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 569 ILVGNKTDRETERSPSTLARIFAQ-RHGMYFLETSAKEAENV 691
+++GNK D E + A+ + ++ + + ETSAKEA NV
Sbjct: 61 VVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINV 102
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
V G + VGKT L+ RF F TI DF IK V + E +LQI DT+G F
Sbjct: 32 VFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTYEFP 90
Query: 435 SITQSYYRSAHALILVY 485
++ + A +LVY
Sbjct: 91 AMRKVDIAKGDAFVLVY 107
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTDRETER-SPSTLARIFAQRHGMYFLETSAKEAENV 691
+ WL+ IE+ A+ V ++L+GNK D E ER + R + + + F E SA+ ENV
Sbjct: 20 ISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGEDNNLEFYEASARTGENV 79
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRS 437
LVG GKT V G F T+G + +V V +++WD GQ RFRS
Sbjct: 25 LVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR----KVSKGNVTIKVWDIGGQPRFRS 80
Query: 438 ITQSYYRSAHALILVYD 488
+ + Y R + ++ + D
Sbjct: 81 MWERYCRGVNCIVYMVD 97
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/98 (28%), Positives = 50/98 (51%)
Frame = +3
Query: 195 LCLSMIFGDRDGRLQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVE 374
L +S +F G+ Q+ I ++VG GKT ++ + G TIG F +++VE
Sbjct: 3 LTISSLFTRLFGKKQMRI--LMVGLDAAGKTTILYKLKLGEIVTTI-PTIG--FNVESVE 57
Query: 375 VDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
+ + +WD GQ++ R + + Y+++ LI V D
Sbjct: 58 Y--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVD 93
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/93 (27%), Positives = 47/93 (50%)
Frame = +3
Query: 210 IFGDRDGRLQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEK 389
+F G+ ++ I ++VG GKT ++ + G TIG F ++TVE +
Sbjct: 8 LFAGLFGKKEMRI--LMVGLDAAGKTTILYKLKLGEIVTTI-PTIG--FNVETVEY--KN 60
Query: 390 VKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
+ +WD GQ++ R + + Y+++ LI V D
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRS 437
++G GVGKT L++ F F T+ D+ I +V +DG I DTAG F
Sbjct: 17 ILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTYAFPV 75
Query: 438 ITQSYYRSAHALILVYDISCQ 500
+ + + A I+V+ I+ +
Sbjct: 76 MRRLAIHTCQAFIVVFAINSE 96
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +3
Query: 330 QGATIGVDFMIKTVE---VDGEK---VKLQIWDTAGQERFRSITQSYYRSAHALILVY 485
Q TIGVDF + +E D +K VKLQ WD A ERF +T Y R+ ++ +
Sbjct: 82 QKPTIGVDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFW 139
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL G+ VGKT + TQ A + + EV +K L +WDT G +
Sbjct: 10 VLTGDNNVGKTSFLINLTQNELEGTPTAFANYELGL---EVGSQKFLLDLWDTEGTTEYD 66
Query: 435 SITQSYYRSAHALILVYDISCQPT 506
+ Y+ + ++L +DIS + T
Sbjct: 67 RLRPLTYQGSDIILLCFDISNRQT 90
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVD-----GEKVKLQIWDTAGQ 422
+VG++GVGKT LV TIG +K + G+ L+ WD G
Sbjct: 11 VVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDIGGS 70
Query: 423 ERFRSITQSYYRSAHALILVYDIS 494
+ +Y + LILV+D++
Sbjct: 71 ANHENSRSIFYNGINGLILVHDLT 94
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 420 QERFRSITQSYYRSAHALILVYDIS 494
QER+R+IT +YYR A +LVYDI+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIA 26
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 515 LPDWLREIEEYANNKVLRILVGNKTD 592
L W+ E+ ++A++ + IL+GNK+D
Sbjct: 34 LNKWVEELRQHASDDLSIILIGNKSD 59
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
++VG GKT ++ P TIG F ++ VE + +K +WD GQ++ R
Sbjct: 94 LMVGLDAAGKTTILYHLKLDE-PVNTIPTIG--FNVEVVEY--KNIKFTVWDIGGQDKIR 148
Query: 435 SITQSYYRSAHALILVYD 488
+ + Y++ LI V D
Sbjct: 149 LLWRLYFQETQGLIFVVD 166
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 36.7 bits (81), Expect = 0.018
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 228 GRLQVSI*SVLVGNAGVGKTCLVRRF----TQGLFPPGQGATIGVDFMIKTVEVDGEKVK 395
G QV I V++G GKT ++ + T P TIG F ++T++ + V
Sbjct: 16 GNRQVRI--VMLGLDAAGKTTILYKLKLKETVSTIP-----TIG--FNVETLQPT-KNVT 65
Query: 396 LQIWDTAGQERFRSITQSYYRSAHALILVYDIS 494
L IWD GQ++ R + + Y++ L+ V D S
Sbjct: 66 LTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSS 98
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 36.3 bits (80), Expect = 0.024
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +3
Query: 396 LQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTL 509
+ +WDT G E + S+T+++Y ++ +++VY + +L
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSL 38
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTD-RETERSPSTLARIFAQ 640
WL+E+ ++A++ ++ +LVGNK+D R P+ A+ FA+
Sbjct: 27 WLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAE 66
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 545 YANNKVLRILVGNKTDRETERSPS-TLARIFAQRHGMYFLETSAKEAENV 691
+AN +V ILVGNK D E ER S + A + G+ F ETSAK+ NV
Sbjct: 10 WANAQV--ILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNV 57
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 354 FMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
F ++TVE + + +WD GQ++ R + + Y+++ LI V D
Sbjct: 500 FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 542
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 WLREIEEYANNKVLRILVGNKTDRETERS-PSTLARIFAQRHGMYFLETSAKEAENV 691
W+ ++ N V+ +LVGNKTD +R + A+ + F+ETSAK NV
Sbjct: 20 WIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKAGYNV 76
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFR 434
VL+G AGVGK+ L+ RF G F T+ + + + + +D + L I DTA
Sbjct: 131 VLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTAS----- 184
Query: 435 SITQSYYRSAHALILVYDIS 494
+ Y I+VY I+
Sbjct: 185 TYEPVYLSQNEGFIVVYSIN 204
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 527 LREIEEYANNKVLRILVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSA 673
+REI++ L +L GNK D + R+ S AR FA H F ETSA
Sbjct: 219 IREIKKQKALTTLIVLAGNKCDLKHCRAVSRQEAREFAAEHECVFHETSA 268
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 35.1 bits (77), Expect = 0.054
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 521 DWLREIEEYANNKVLRILVGNKTDRETERSPS 616
+W+R IEE+A+ V ++++GNK D E R S
Sbjct: 105 NWIRNIEEHASQDVEKMVLGNKCDMEDRRQVS 136
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 408 DTAGQERFRSITQSYYRSAHALILVYDISCQPTLIV 515
DTAG+E++ ++ Y R A A I+ YDI+ + +L V
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKV 313
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 34.7 bits (76), Expect = 0.072
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 500 TYIDCLPDWLREIEEYANNKVLRILVGNKTDRETERSPST-LARIFAQRHGMYFLETSAK 676
T+ D P + + + V +LVGNK+D ER S A+ A+ G F ETSAK
Sbjct: 73 TFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAEAWGCPFYETSAK 132
Query: 677 EAENV 691
NV
Sbjct: 133 TRSNV 137
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 264 GNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSIT 443
G AGVGKT +V+RF G F T+ D K + +G + L D++G +F ++
Sbjct: 15 GGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLNTTDSSGSYQFPAMR 73
Query: 444 Q 446
+
Sbjct: 74 E 74
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 348 VDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
V F ++T+ + + +WD GQ++ R + + Y++ A +I V D
Sbjct: 141 VAFNVETIS-PCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVD 186
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 354 FMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
F ++TV + + +WD GQ++ R++ + YY+ +I V D
Sbjct: 30 FNVETVTY--KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVD 72
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 258 LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRS 437
+VG+ VGKT L FP T VDG K + ++D+AG E F
Sbjct: 11 IVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGEDFDR 70
Query: 438 ITQSYYRSAHALILVYDIS 494
+ Y + ++ +DI+
Sbjct: 71 LRPLGYPNTDIFLVCFDIA 89
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +3
Query: 222 RDGRLQVSI*SVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGV---DFMIKTVEVDGEKV 392
R R S+ +LVG GKT L+ R AT G+ +F +K + E +
Sbjct: 544 RSARGYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFI 603
Query: 393 KLQIWDTAGQERFRSITQSYYRSAHALILVYDI 491
+IWD GQE + + Q + + ILV+++
Sbjct: 604 -FKIWDFGGQEDYYATHQCFISTLSLYILVWNL 635
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 DGRLQVSI*SV-LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKV 392
+G++QV + L+G GKT L + F PG+ +T G++ T EVD E+V
Sbjct: 74 EGKVQVYRGRIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVDVEQV 130
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIG 347
V++G AGVGKT LV RF G F T+G
Sbjct: 328 VVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 375 VDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDIS 494
+DG V L++WDT G + Y++AH ++L + I+
Sbjct: 78 IDGVSVSLRLWDTFGDHSMN--RRFAYQNAHVIVLCFAIN 115
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 390 VKLQIWDTAGQERFRSITQSYYRSAHALILVYD 488
++ ++WD G+E+ R + ++Y R A+I V D
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVD 98
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 572 LVGNKTDRETERSPSTL-ARIFAQRHGMYFLETSAKEAENV 691
L+GNK D E +R AR A G+ + ETSA +NV
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 42
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 387 KVKLQIWDTAGQERFRSITQSYYRSAHALILVYDIS 494
K K I DTAGQE + ++ Y R+ + V+ ++
Sbjct: 276 KSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVN 311
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 557 KVLRILVGNKTDRETERSPSTLARIFAQRHGMYFLETSAKEAENV 691
+V +LVGNK D ++ A+ A+ + + F ETSAK + V
Sbjct: 334 EVPMVLVGNKCDLPQRTVSTSDAQELAKSYNIPFQETSAKTRQGV 378
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 345 GVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYY 455
G F ++TVE +K IWD G ++ R + + YY
Sbjct: 220 GAGFNVETVE--HRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 255 VLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFM 359
+++G+ GVGKT L++R+ F AT+ + +
Sbjct: 675 LVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNIV 709
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 225 DGRLQVSI*SV-LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVK 395
+G++QV + L+G GKT L + F P + +T G++ T EVD ++VK
Sbjct: 352 EGKVQVYRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 DGRLQVSI*SV-LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKV 392
+G++QV + L+G GKT L + F P + +T G++ T EVD E+V
Sbjct: 283 EGKVQVYRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQV 339
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 361 IMKSTPMVAP*PGGNKPCVNRRTKQVFPTPAFPTSTL*IETCNLPS 224
+ K+TP P P P + TK P+P PTST +T P+
Sbjct: 15 LTKATPQTTPTPTKPTPTTHTPTK---PSPTTPTSTAPTQTTPTPT 57
>SB_54213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 217 PNIIERHNFLILVSYAQLNRTFYV-TTRFEKILYLKRLHYDHTLI 86
PN++ RH L Q N T +V F LKRLHY HT I
Sbjct: 124 PNLLTRHARRALT---QTNHTRFVFIAHFYFRSRLKRLHYSHTYI 165
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 614 LGISLSLCLFYYQLISLALCYSHTLQSPLASQVNNQCRLTRYVINKY 474
+ + L + +QL SL + ++ L P ASQ + RY++ +
Sbjct: 845 VAVDLKMVPMMFQL-SLFVTFNRVLHDPAASQYKEMVKFARYILGNF 890
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 225 DGRLQVSI*SV-LVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVK 395
+G++QV + L+G GKT L + F P + +T G++ EVD E+V+
Sbjct: 354 EGKVQVYRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,400,534
Number of Sequences: 59808
Number of extensions: 444286
Number of successful extensions: 1238
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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