Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20918
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 145 2e-35
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 145 2e-35
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 145 2e-35
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 145 3e-35
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 144 6e-35
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 143 1e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 142 2e-34
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 142 2e-34
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 141 3e-34
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 77 1e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 77 1e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 76 3e-14
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 76 3e-14
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 76 3e-14
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 76 3e-14
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 75 4e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 67 9e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 67 9e-12
At4g37190.1 68417.m05265 expressed protein 32 0.41
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 32 0.41
At4g20080.1 68417.m02937 C2 domain-containing protein contains I... 31 0.95
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 30 1.7
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 30 1.7
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.2
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 29 2.9
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 3.8
At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A... 28 6.7
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 6.7
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.9
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 145 bits (352), Expect = 2e-35
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 121 bits (292), Expect = 4e-28
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 145 bits (352), Expect = 2e-35
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 124 bits (299), Expect = 6e-29
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (267), Expect = 4e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 145 bits (352), Expect = 2e-35
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 122 bits (293), Expect = 3e-28
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (267), Expect = 4e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 145 bits (351), Expect = 3e-35
Identities = 62/67 (92%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 129 DCLQGFQ 135
Score = 126 bits (304), Expect = 1e-29
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 231
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 232 VPRAILVDWSP 264
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 154 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 213
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 144 bits (348), Expect = 6e-35
Identities = 61/67 (91%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 129 DCLQGFQ 135
Score = 130 bits (315), Expect = 6e-31
Identities = 56/71 (78%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 231
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 232 VPRAILVDWSP 264
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 154 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 213
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 61/67 (91%), Positives = 67/67 (100%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 128 bits (309), Expect = 3e-30
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 235 PRAILVDWSP 264
PRAIL+D P
Sbjct: 61 PRAILMDLEP 70
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 2e-34
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 127 bits (306), Expect = 8e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 2e-34
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 127 bits (306), Expect = 8e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (266), Expect = 6e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 141 bits (342), Expect = 3e-34
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 435 DCLQGFQ 455
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 126 bits (305), Expect = 1e-29
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 234
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 235 PRAILVDWSP 264
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 111 bits (267), Expect = 4e-25
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 688
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 228
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 228
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 228
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 228
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 228
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 512 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 228
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 434
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 435 DCLQGF 452
LQGF
Sbjct: 130 TGLQGF 135
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 228
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 229 YVPRAILVDWSP 264
+VPRA+ +D P
Sbjct: 61 HVPRAVFLDLEP 72
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +2
Query: 551 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 685
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDIC 213
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 9e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 58 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 237
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 238 RAILVDWSP 264
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 428
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 429 SCDCLQGF 452
D L+GF
Sbjct: 128 GSDSLEGF 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 515 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 673
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 9e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 58 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 237
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 238 RAILVDWSP 264
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 428
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 429 SCDCLQGF 452
D L+GF
Sbjct: 128 GSDSLEGF 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 515 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 673
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 55 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 222
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 223 GKYVPRAILVDWSPAPWTLSA 285
Y PR + V+ A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 431 LRLPTG-LPTYTFPRWRHRVRYGHPPH-----SKIREEYPDRIMNTYSVVPSPKVSDTVV 592
L LPT L + W +R R HPPH S+ +PD + + P+ + +D V
Sbjct: 872 LILPTVFLYLFVIGMWNYRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVR 931
Query: 593 EPYNATLSV 619
Y+ SV
Sbjct: 932 MRYDRLRSV 940
>At4g20080.1 68417.m02937 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 774
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 458 YTFPRWRHRVRYGHPPH-----SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 604
+ F +R +R HPPH SK PD + + V PS K D + Y+
Sbjct: 626 FVFGLYRFGLRPRHPPHMDIKLSKADSALPDELDEEFDVFPSSKSGDVLKRRYD 679
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 473 WRHRVRYGHPPHSKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 619
W +R R HPPH R +PD + + P+ + SD V Y+ S+
Sbjct: 631 WYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 473 WRHRVRYGHPPHSKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 619
W +R R HPPH R +PD + + P+ + SD V Y+ S+
Sbjct: 634 WYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 387 LVDSVLDVVRKESESCDCLQGF 452
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 49 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNEASGG 225
YK E V L C N++G IS HG + +G ++ +L+ +N+ Y +A+
Sbjct: 213 YKFHEKVQLDYSICSNELGDP--NAISKVHGREDINYLNGLTNNAKLKFLNLMY-DATPS 269
Query: 226 KYVPRAILVDWSPAPWT 276
Y+ I+ D+ P T
Sbjct: 270 DYI-SMIITDYGMVPPT 285
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 54 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 140
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A26)
identical to Cytochrome P450 71A26 (SP:Q9STK7)
{Arabidopsis thaliana}
Length = 489
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 160 YHGDSDLQ--LERINVYYNEASGGKYVPRAILVDW 258
Y G++D + +ER+N S G YVP +DW
Sbjct: 189 YGGETDFKELMERLNKLLGTFSVGSYVPWLAWIDW 223
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 401 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 285
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 61 EIVHLQAGQCGNQIGAKFWEIISD 132
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,161
Number of Sequences: 28952
Number of extensions: 314959
Number of successful extensions: 950
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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