Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20917
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 101 6e-22
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid tr... 93 3e-19
AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid tr... 84 1e-16
U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid tran... 75 6e-14
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid tr... 73 3e-13
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 73 3e-13
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 73 3e-13
U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid tran... 69 3e-12
AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical ... 65 6e-11
AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical ... 65 6e-11
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 4.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 4.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 4.8
U97009-8|AAC69032.1| 534|Caenorhabditis elegans Udp-glucuronosy... 29 4.8
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 4.8
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 8.4
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 28 8.4
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 101 bits (242), Expect = 6e-22
Identities = 46/99 (46%), Positives = 69/99 (69%)
Frame = +2
Query: 218 NSKQTAQRMRQRIKLKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTV 397
N K+ + Q IKLK + LF+ +I+GV+IGSGIFVSP L +GS + L+IW +
Sbjct: 2 NEKEEEVSLNQ-IKLKPRISLFNGCTIIIGVIIGSGIFVSPKGVLLEAGSAGMSLLIWLL 60
Query: 398 SGIISLLGALSFAELGTVVGKSGAEYAYFQEAFGKIHNF 514
SG+ +++GA+ ++ELGT++ KSG +YAY EAFG + +F
Sbjct: 61 SGVFAMIGAVCYSELGTLIPKSGGDYAYIYEAFGPLPSF 99
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 WGPLPSFSCAWIYVMILRPAEVAIVVMTFAEYAIQPITIDVHPDYKDNAIKLASLAAL 687
+GPLPSF W+ ++I+ P +AI+ +T A YA+QP PD N +A L
Sbjct: 93 FGPLPSFLFLWVALVIINPTSLAIIAITCATYALQPFYSCPVPDVVVNLFAGCIIAVL 150
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +2
Query: 260 LKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAE 439
L++ L LF+ V++I+G +IGSGIFVSP E +GSV L LI+W +SGI + +GA +AE
Sbjct: 28 LEKSLTLFNGVSMIVGCIIGSGIFVSPTGVQEQAGSVGLSLIVWLISGIFTAIGAYCYAE 87
Query: 440 LGTVVGKSGAEYAYFQEAFG 499
LGT++ KSG +YAY EAFG
Sbjct: 88 LGTLIKKSGGDYAYIMEAFG 107
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 514 WGPLPSFSCAWIYVMILRPAEVAIVVMTFAEYAIQPITIDVHP 642
+GP +F WI +++RP V IV +TFA Y ++P D P
Sbjct: 106 FGPFVAFIRLWIEAIVVRPCTVTIVALTFAIYGLRPFFPDCAP 148
>AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid
transporter protein 3 protein.
Length = 493
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/80 (50%), Positives = 59/80 (73%)
Frame = +2
Query: 260 LKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAE 439
L++ + LF+ V++I+G +IGSGIF+SP +GSV L LI+W +SG+ + +GA +AE
Sbjct: 28 LEKTMTLFNGVSIIVGCIIGSGIFISPTGIQAQAGSVGLSLIVWVLSGLFAGIGAFCYAE 87
Query: 440 LGTVVGKSGAEYAYFQEAFG 499
LGT++ KSG +YAY EAFG
Sbjct: 88 LGTLIRKSGGDYAYIMEAFG 107
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 514 WGPLPSFSCAWIYVMILRPAEVAIVVMTFAEYAIQPITIDVHPDYKDNAIKLASLAAL 687
+GP +F WI +++RP IV +TFA Y ++P +PD + +AAL
Sbjct: 106 FGPFLAFLRLWIESIVVRPCTATIVALTFAIYMLKPF----YPDCDSPPLSTELIAAL 159
>AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid
transporter protein 7 protein.
Length = 506
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +2
Query: 254 IKLKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSF 433
I K +GL +A++ +G ++GSGIF+SP S L ++GSV L L +W + ISL GALS+
Sbjct: 8 IPQKHTIGLITAISYTVGDIVGSGIFISPTSILNHAGSVGLSLCLWALCACISLFGALSY 67
Query: 434 AELGTVVGKSGAEYAYFQEAFG 499
ELGT + KSG ++AY FG
Sbjct: 68 VELGTSIRKSGCDFAYLSH-FG 88
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 514 WGPLPSFSCAWIYVMILRPAEVAIVVMTFAEYAI 615
W PL S S W+ + PA +AI ++F EY +
Sbjct: 89 WRPLAS-SFMWVSTCLSYPAVLAIQAISFGEYIV 121
>U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid
transporter protein 8 protein.
Length = 483
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/75 (42%), Positives = 53/75 (70%)
Frame = +2
Query: 257 KLKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFA 436
K ++GL A + I+G +IGSGIF++P +E++GSV L LIIW +++++ A+++
Sbjct: 4 KEDNKIGLIGATSYIVGSIIGSGIFIAPKGIVEHAGSVGLSLIIWVFCALLNMITAINYI 63
Query: 437 ELGTVVGKSGAEYAY 481
ELGT + +SGA+ AY
Sbjct: 64 ELGTSIPESGADLAY 78
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 514 WGPLPSFSCAWIYVMILRPAEVAIVVMTFAEYAIQPI 624
W P+ +FS W+ ++I + A++ +TF +Y +Q +
Sbjct: 84 WTPI-AFSLLWLSLLIQSSSSAAVLYLTFGKYLVQAL 119
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +2
Query: 266 RELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAELG 445
+++GL A++ I+G ++GSGIF++P S +E SV L L IW ++ IS+LG+ + ELG
Sbjct: 18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELG 77
Query: 446 TVVGKSGAEYAY 481
T + SG ++AY
Sbjct: 78 TSIRLSGGDFAY 89
>AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid
transporter protein5, isoform c protein.
Length = 278
Score = 72.5 bits (170), Expect = 3e-13
Identities = 29/71 (40%), Positives = 50/71 (70%)
Frame = +2
Query: 269 ELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAELGT 448
++G A + ++G +IGSGIF++PAS L S+ L L+IW + +I++LGA+ + ELGT
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGT 65
Query: 449 VVGKSGAEYAY 481
+ ++G ++AY
Sbjct: 66 SIREAGCDFAY 76
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 72.5 bits (170), Expect = 3e-13
Identities = 29/71 (40%), Positives = 50/71 (70%)
Frame = +2
Query: 269 ELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAELGT 448
++G A + ++G +IGSGIF++PAS L S+ L L+IW + +I++LGA+ + ELGT
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGT 65
Query: 449 VVGKSGAEYAY 481
+ ++G ++AY
Sbjct: 66 SIREAGCDFAY 76
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 72.5 bits (170), Expect = 3e-13
Identities = 29/71 (40%), Positives = 50/71 (70%)
Frame = +2
Query: 269 ELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAELGT 448
++G A + ++G +IGSGIF++PAS L S+ L L+IW + +I++LGA+ + ELGT
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGT 65
Query: 449 VVGKSGAEYAY 481
+ ++G ++AY
Sbjct: 66 SIREAGCDFAY 76
>U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid
transporter protein 4 protein.
Length = 526
Score = 69.3 bits (162), Expect = 3e-12
Identities = 27/73 (36%), Positives = 50/73 (68%)
Frame = +2
Query: 263 KRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAEL 442
+ ++GL+S ++ ++ +IG+GIF++P L+Y+ S L L++W G+ISL+G + + EL
Sbjct: 17 RHQMGLWSCMSYVIANIIGAGIFITPGPILQYTFSNGLALLVWIGCGLISLIGGICYIEL 76
Query: 443 GTVVGKSGAEYAY 481
GT + G ++AY
Sbjct: 77 GTSIHDPGCDFAY 89
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 529 SFSCAWIYVMILRPAEVAIVVMTFAEYAI 615
+FS W+ V++ PA A+ +TF +Y +
Sbjct: 99 AFSFMWVGVIMSFPASAAVQALTFGQYIV 127
>AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical
protein Y53H1C.1b protein.
Length = 527
Score = 64.9 bits (151), Expect = 6e-11
Identities = 24/73 (32%), Positives = 50/73 (68%)
Frame = +2
Query: 263 KRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAEL 442
+ ++GL+S ++ ++ +IG+GIF++P + L+ + + + L++W G+ISL+G + + EL
Sbjct: 17 RHQMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIEL 76
Query: 443 GTVVGKSGAEYAY 481
GT + G ++AY
Sbjct: 77 GTSIRDPGCDFAY 89
>AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical
protein Y53H1C.1a protein.
Length = 541
Score = 64.9 bits (151), Expect = 6e-11
Identities = 24/73 (32%), Positives = 50/73 (68%)
Frame = +2
Query: 263 KRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAEL 442
+ ++GL+S ++ ++ +IG+GIF++P + L+ + + + L++W G+ISL+G + + EL
Sbjct: 17 RHQMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIEL 76
Query: 443 GTVVGKSGAEYAY 481
GT + G ++AY
Sbjct: 77 GTSIRDPGCDFAY 89
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 LKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAE 439
L+R L F L +G MIG+GI+V S + + ++ ++ + ++G SLL AL +AE
Sbjct: 25 LRRCLSTFDITLLGVGHMIGAGIYVLTGSVVRNTAGPSI-ILSFLLAGFASLLSALCYAE 83
Query: 440 LGTVVGKSGAEYAYFQEAFGKIHNF--GVHYRLSHVLGS 550
G K+G+ Y Y G++ F G + L H+LG+
Sbjct: 84 FGARFPKAGSAYTYTYVGVGELWAFVIGWNIILEHMLGA 122
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 LKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFAE 439
L+R LGL L LG M+G+GI+V + + ++ + + ++GI +LL A S+AE
Sbjct: 25 LRRCLGLMDITFLALGQMMGAGIYVLTGTVVRNQAGPSI-IFSFALAGIAALLSAFSYAE 83
Query: 440 LGTVVGKSGAEYAYFQEAFGKIHNFGVHYR--LSHVLGS 550
G ++G+ Y Y FG++ F V + L +++G+
Sbjct: 84 FGARFPRAGSAYTYTYIGFGELWAFIVGWTIPLEYMIGN 122
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +2
Query: 257 KLKRELGLFSAVNLILGVMIGSGIFVSPASALEYSGSVALCLIIWTVSGIISLLGALSFA 436
++KR L + + + +G MIG+GI+V S + A+ ++ + SG +LL A S+A
Sbjct: 25 QMKRCLTILDVMFIAIGHMIGAGIYVLTGSVVRNQAGPAI-ILSFIFSGFAALLSAFSYA 83
Query: 437 ELGTVVGKSGAEYAYFQEAFGKIHNFGVHYR--LSHVLGS 550
E G ++G+ Y Y G+I F V + L +++G+
Sbjct: 84 EFGARFPRAGSAYTYSYVGMGEIWAFIVGWTVPLEYMIGN 123
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1304 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1351
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1595 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1642
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1610 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1657
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1304 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1351
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1595 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1642
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 453 TTVPNSANDNAPSKDIIPETVHIIRHSATDPE-YSNAEAGETNIPDPI 313
T++P A+DN ++++ ET I+ + +PE ++ +E + P+ +
Sbjct: 1610 TSIPVVASDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESEPEAV 1657
>U97009-8|AAC69032.1| 534|Caenorhabditis elegans
Udp-glucuronosyltransferase protein12 protein.
Length = 534
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 557 IT*IQAHEKDGNGPQNCEFSQRLPENMHTRLLIFQLQFLTQRTIMLLV 414
+T I +EKD + EF +RLP+N+H + I Q L + + L +
Sbjct: 336 VTFIWKYEKD-----DLEFQKRLPKNVHLKKWIPQPSLLADKRVKLFI 378
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 120 VHRFFLSNSVFRQRYFNSFTMSAQKAEISDRPETLSR 230
+HRFFL ++ F + +F F K ++ D+ L+R
Sbjct: 54 IHRFFLESNPFHREFF-GFAEKIHKKQLHDKIRELAR 89
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 121 CIDFFYLI-LYLGNGILTVSRCPLKKRKYLIDLKL*ADSTANAAAHKIKTRTRL 279
C+ F + LYL NGI T + K+++Y+ DL+ + + A +T RL
Sbjct: 11 CLGVFLTVSLYLYNGIETGAEALTKRQRYVDDLRRKIGNLEHVAEENGRTIDRL 64
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 309 TPRIRLTAENKPSSRFNFMRCRIRCAVCLEFQVYQIFPLF 190
TP + + E KPS +F+R +C+ C E ++ + LF
Sbjct: 10 TPLLPQSDEKKPSQICSFIRVVFKCSSCFEKFLFLLGVLF 49
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 160 GILTVSRCPLKKRKYLID 213
GILT+ CPL K KYL D
Sbjct: 185 GILTMGYCPLAKGKYLED 202
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 557 IT*IQAHEKDGNGPQNCEFSQRLPENMHTRLLIFQLQFLTQRTIMLLV 414
+T I +EKD + EF +RLP+N+H + + Q L + + L V
Sbjct: 335 VTFIWKYEKD-----DVEFQKRLPKNVHLKNWVPQPSLLADKRLKLFV 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,395,176
Number of Sequences: 27780
Number of extensions: 377885
Number of successful extensions: 1033
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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