Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20912
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    29   4.5  
AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical ...    29   4.5  
U53337-6|AAA96188.2|  510|Caenorhabditis elegans Acetylcholine r...    28   6.0  
Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical
           protein T12D8.5 protein.
          Length = 135

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 512 KQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQ 658
           K++ +  K  + +    L  HN H +AP+  PE  +E     P+R+ ++
Sbjct: 59  KERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYMEAGQVPPMRKASR 107


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 554 PNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQS 700
           P+ L HH+ H  +P   P     +  P P  RT  P  +K      SQS
Sbjct: 314 PSSLQHHHHHRRSP---PLFHSPVYKPKPRSRTESPAALKAAAAAASQS 359


>Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical
           protein W02D9.3 protein.
          Length = 386

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +2

Query: 488 RKSLLEILKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDP 640
           +K   + L  +   +KN  K+   D     P+ + P PKP +   + +P+P
Sbjct: 202 QKKRAKFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEP 252


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 85  VCSCENVHGALEITEREMSGFVCVLILAGVASAQITLDGIRCGQLICQ 228
           + + EN+H    +T  EM GF+   +      A   LDG+   + +CQ
Sbjct: 295 IMNLENLHPDFCLTFHEMIGFLDAQVYFKNIHANYCLDGVSFSESLCQ 342


>AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK616.8 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 586 RSAETETRTQARNTKPGSPKTNEPTSQREGLRDQN 690
           + ++++T +  +NT+ G P    P+S  +G  D+N
Sbjct: 176 KKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKN 210


>U53337-6|AAA96188.2|  510|Caenorhabditis elegans Acetylcholine
           receptor protein 10 protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +2

Query: 593 PKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKKSRRNHAK 730
           P+PKP LK   R    + ++N  L  +    RTS S +KSRR ++K
Sbjct: 349 PRPKPLLKKMHRLVQHIHQSNFVLFKRS--RRTSSSRQKSRRRNSK 392


>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 220 ICQLDEYCSPETTD 261
           IC LDEYC+ ET D
Sbjct: 444 ICDLDEYCNGETND 457


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 220 ICQLDEYCSPETTD 261
           IC LDEYC+ ET D
Sbjct: 444 ICDLDEYCNGETND 457


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
            F57C7.1a protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 578  PHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKD 676
            P  +A KP+P  K   + P P ++   PL++ D
Sbjct: 1086 PKPQAKKPEPPQKKVAKKPAPQQKKKAPLSILD 1118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,197,221
Number of Sequences: 27780
Number of extensions: 321306
Number of successful extensions: 1031
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)