Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20911
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071419-1|AAL49041.1|  147|Drosophila melanogaster RE49992p pro...    51   1e-06
AE014298-2036|AAF48375.1|  147|Drosophila melanogaster CG12540-P...    51   1e-06
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    31   1.8  
AY069801-1|AAL39946.1|  766|Drosophila melanogaster SD03967p pro...    30   3.2  
AE014134-294|AAN10460.1|  766|Drosophila melanogaster CG17646-PB...    30   3.2  
AE014134-293|AAF51341.3|  766|Drosophila melanogaster CG17646-PA...    30   3.2  

>AY071419-1|AAL49041.1|  147|Drosophila melanogaster RE49992p
           protein.
          Length = 147

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 178 PGAHPGCPLCDSSVYSYCSRKQAHDS 255
           P   PGCPLCDSSVYSYCS K  HD+
Sbjct: 77  PAQQPGCPLCDSSVYSYCSHKMVHDA 102



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 255 CCCD----NPSFHGYGCRKTDCKFLYANSCEEYQLISNCCC 365
           CCCD     P      C   DC  LYA SC E+ LI NCCC
Sbjct: 103 CCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143


>AE014298-2036|AAF48375.1|  147|Drosophila melanogaster CG12540-PA
           protein.
          Length = 147

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 178 PGAHPGCPLCDSSVYSYCSRKQAHDS 255
           P   PGCPLCDSSVYSYCS K  HD+
Sbjct: 77  PAQQPGCPLCDSSVYSYCSHKMVHDA 102



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 255 CCCD----NPSFHGYGCRKTDCKFLYANSCEEYQLISNCCC 365
           CCCD     P      C   DC  LYA SC E+ LI NCCC
Sbjct: 103 CCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
            protein.
          Length = 9196

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 477  TGIQSKQMEQIVKLKCSIM-LRLMEPRQACPRNSSEDPHSSSWRSTDILHK 328
            T   +K   QI K K SI  ++  +PR    R S  D   S  +STD L+K
Sbjct: 8741 TSALTKSTSQITKQKNSIAEMKQAQPRSQIKRGSQSDSKESLIKSTDRLYK 8791


>AY069801-1|AAL39946.1|  766|Drosophila melanogaster SD03967p
           protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511
           K  YFL++ +   I+   +IG++F  +  NV  N  S+L  Y++L
Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547


>AE014134-294|AAN10460.1|  766|Drosophila melanogaster CG17646-PB,
           isoform B protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511
           K  YFL++ +   I+   +IG++F  +  NV  N  S+L  Y++L
Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547


>AE014134-293|AAF51341.3|  766|Drosophila melanogaster CG17646-PA,
           isoform A protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511
           K  YFL++ +   I+   +IG++F  +  NV  N  S+L  Y++L
Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,601,803
Number of Sequences: 53049
Number of extensions: 486864
Number of successful extensions: 1191
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)