BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20911 (659 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY071419-1|AAL49041.1| 147|Drosophila melanogaster RE49992p pro... 51 1e-06 AE014298-2036|AAF48375.1| 147|Drosophila melanogaster CG12540-P... 51 1e-06 AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P... 31 1.8 AY069801-1|AAL39946.1| 766|Drosophila melanogaster SD03967p pro... 30 3.2 AE014134-294|AAN10460.1| 766|Drosophila melanogaster CG17646-PB... 30 3.2 AE014134-293|AAF51341.3| 766|Drosophila melanogaster CG17646-PA... 30 3.2 >AY071419-1|AAL49041.1| 147|Drosophila melanogaster RE49992p protein. Length = 147 Score = 51.2 bits (117), Expect = 1e-06 Identities = 19/26 (73%), Positives = 20/26 (76%) Frame = +1 Query: 178 PGAHPGCPLCDSSVYSYCSRKQAHDS 255 P PGCPLCDSSVYSYCS K HD+ Sbjct: 77 PAQQPGCPLCDSSVYSYCSHKMVHDA 102 Score = 46.4 bits (105), Expect = 3e-05 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +3 Query: 255 CCCD----NPSFHGYGCRKTDCKFLYANSCEEYQLISNCCC 365 CCCD P C DC LYA SC E+ LI NCCC Sbjct: 103 CCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143 >AE014298-2036|AAF48375.1| 147|Drosophila melanogaster CG12540-PA protein. Length = 147 Score = 51.2 bits (117), Expect = 1e-06 Identities = 19/26 (73%), Positives = 20/26 (76%) Frame = +1 Query: 178 PGAHPGCPLCDSSVYSYCSRKQAHDS 255 P PGCPLCDSSVYSYCS K HD+ Sbjct: 77 PAQQPGCPLCDSSVYSYCSHKMVHDA 102 Score = 46.4 bits (105), Expect = 3e-05 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +3 Query: 255 CCCD----NPSFHGYGCRKTDCKFLYANSCEEYQLISNCCC 365 CCCD P C DC LYA SC E+ LI NCCC Sbjct: 103 CCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143 >AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA protein. Length = 9196 Score = 30.7 bits (66), Expect = 1.8 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 477 TGIQSKQMEQIVKLKCSIM-LRLMEPRQACPRNSSEDPHSSSWRSTDILHK 328 T +K QI K K SI ++ +PR R S D S +STD L+K Sbjct: 8741 TSALTKSTSQITKQKNSIAEMKQAQPRSQIKRGSQSDSKESLIKSTDRLYK 8791 >AY069801-1|AAL39946.1| 766|Drosophila melanogaster SD03967p protein. Length = 766 Score = 29.9 bits (64), Expect = 3.2 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511 K YFL++ + I+ +IG++F + NV N S+L Y++L Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547 >AE014134-294|AAN10460.1| 766|Drosophila melanogaster CG17646-PB, isoform B protein. Length = 766 Score = 29.9 bits (64), Expect = 3.2 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511 K YFL++ + I+ +IG++F + NV N S+L Y++L Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547 >AE014134-293|AAF51341.3| 766|Drosophila melanogaster CG17646-PA, isoform A protein. Length = 766 Score = 29.9 bits (64), Expect = 3.2 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 645 KYQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFL 511 K YFL++ + I+ +IG++F + NV N S+L Y++L Sbjct: 506 KRNYFLLLAR---IFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,601,803 Number of Sequences: 53049 Number of extensions: 486864 Number of successful extensions: 1191 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1191 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2827453950 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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