Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20910
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.009
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 35 0.080
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 34 0.14
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16) 30 1.7
SB_17357| Best HMM Match : IMS (HMM E-Value=0) 30 1.7
SB_53011| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.0
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_59271| Best HMM Match : LRR_1 (HMM E-Value=0.014) 29 4.0
SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.9
SB_22423| Best HMM Match : ASC (HMM E-Value=1.8e-05) 28 6.9
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 28 9.1
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 28 9.1
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 526 PHGGRSDHHRRV--GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYA 699
P G + H R+ GT+A G +PW L + G G L+HPQ V+T AH Y+
Sbjct: 129 PGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSNYGGQFCG-GTLVHPQWVITAAHCVYRRG 187
Query: 700 PGNLRARAG 726
P + + R G
Sbjct: 188 PNDFKIRMG 196
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +1
Query: 553 RRV--GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYA---PGNLRA 717
RRV G EA+ G+FPW +ALL + Y G G L+H + V+TGAH Y P +
Sbjct: 27 RRVVGGDEAKAGQFPWQIALL-FKRQQYCG-GALVHERWVVTGAHCFNPYTSEDPRDWNV 84
Query: 718 RAGEWD 735
GE++
Sbjct: 85 TLGEYN 90
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 562 GTEAQFGEFPWVVAL-LDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAGEW 732
G A+ GE+PW V++ L++ + + G +I P V+T AH N++ GEW
Sbjct: 549 GANAEHGEWPWQVSMKLNSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEW 606
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNL 711
GTEA +PW L A + G G LIHP+ V+T AH P ++
Sbjct: 263 GTEAPVNGWPWQAMLRSAGGSQFCG-GSLIHPEWVLTAAHCLENTQPSDI 311
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNL 711
GTEA +PW L A + G G LIHP+ V+T AH P ++
Sbjct: 223 GTEAPVNGWPWQAMLRSAGGSQFCG-GSLIHPEWVLTAAHCLENTQPSDI 271
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAG 726
GT A+ G++PW L Y G G LI PQ ++T H + ++ R G
Sbjct: 14 GTAAKHGDWPWQAQLRTTSGFPYCG-GSLIAPQWILTATHCVERKQASSIVIRLG 67
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAG 726
G A G++PW L Y G G LIH V+T AH P + R G
Sbjct: 394 GAAANPGDWPWQAQLRTTTGFPYCG-GSLIHSNWVLTAAHCISSKRPAEVVVRLG 447
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 386 GWGVLDVRFGEEDCQESVEICCTNPITEPVPKPQPEPLEVEG 511
GW + DV+F D E + P+ EP P+P P+P G
Sbjct: 312 GWTLEDVQFELIDMNEEKPV--DEPVAEPKPEPPPQPDSAPG 351
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAH 681
GTEA +PW LL + N G LI P V+T AH
Sbjct: 33 GTEAPINGWPWQAMLLRSPNGDQFCGGSLIDPGWVLTAAH 72
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -3
Query: 432 SWQSSSPNLTSSTPHPVTLALLTSTPSLFLLHK**GTHLQDSPFLSVNTLLLSVGLTMMF 253
S+ + P P+P T TPS + + ++ +PFLS +T LLS T++
Sbjct: 522 SYLPTQPYYPPPQPYPPTQPSYPPTPSSYPPTQ--PSYPPTAPFLSADTTLLSSDTTLLS 579
Query: 252 PGSPCRLRRR 223
P S + RR
Sbjct: 580 PDSTLLILRR 589
>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 595 PRGTRRTEPPYPPSGDGHSDPHGVPVAASFNFE 497
PRG ++ +P Y P+ D D +P+ ++NFE
Sbjct: 463 PRGHKKYQPYYLPTLDAKVDQRSLPLGYAWNFE 495
>SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16)
Length = 896
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -2
Query: 664 RLEDV--SGLLLQRTIRSKRPAEPQPRGT----RRTEP--PYPPSGDGHSDPHGVPVAA 512
R+E V GL L+ T S P P P+ + ++T P P+P + PH PVAA
Sbjct: 110 RVEQVPNEGLTLETTPHSTTPQHPTPQHSPPIRKQTPPSKPHPSPTPAQAPPHSRPVAA 168
>SB_17357| Best HMM Match : IMS (HMM E-Value=0)
Length = 990
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 248 VPRAGFAGVG-GVPKMFRSKAGSKVVSWARPTVTSTASKSERIALLLLKHSEKENRQNFT 72
+P F G+G V K+ S AGSK + STA K E+ + S+KE++Q +
Sbjct: 575 IPAHDFRGLGIQVSKLTNSSAGSKTLFDFMRCEDSTAEKPEKDEIRTA--SDKEDKQPYV 632
Query: 71 SLYYEN 54
+ EN
Sbjct: 633 NAVGEN 638
>SB_53011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 619 SKRPAEPQPRGTRRTEPPYPPSGDGHSDPHGVPVAASFNFEGFRL 485
S+ A P P GT+ PP GDG DP G+ + FR+
Sbjct: 386 SEEGAPPNP-GTKSPGPPKQSGGDGKLDPTGMKLLEPEGISTFRV 429
>SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 457 ISAADLHALLAVFFAE-PDIQHSPPRHAGVINVHPFIVLVTQIVGDAFARFPVLIRKHAV 281
+ +A L ++VFF PDI ++++ ++ +VGD A F VL + +
Sbjct: 240 VPSAPLVGGISVFFLNRPDIDFDLTNLLNILDIPGLSDILRGVVGDVVASFVVLPNRICI 299
Query: 280 ALRRLNDDVSRFPVP 236
L ++ ++P+P
Sbjct: 300 PLTDVDPYKLKYPLP 314
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAH 681
G+EA GE+PW A L + + G L+ P V+T AH
Sbjct: 35 GSEALLGEWPW-QAWLHLQHTGFICGGSLVAPGWVLTAAH 73
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 631 RTIRSKRPAEPQPRGTRRT-EPPYPPSGDGHSDPHGVP 521
R +R P P P T T +PP P D H+ P VP
Sbjct: 1522 RDLRIFLPTSPGPPATDHTHQPPAPSHMDDHTHPTSVP 1559
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 568 PYPPSGDGHSDPHGVPVAA 512
P PP GDG S GVP+AA
Sbjct: 359 PLPPIGDGESGTSGVPLAA 377
>SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 631 RTIRSKRPAEPQPRGTRRT-EPPYPPSGDGHSDPHGVP 521
R +R P P P T T +PP P D H+ P VP
Sbjct: 194 RDLRIFLPTSPGPPATDHTHQPPAPSHMDDHTHPTSVP 231
>SB_59271| Best HMM Match : LRR_1 (HMM E-Value=0.014)
Length = 897
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 446 CCTNPITEPVP-KPQPEPLEVEGCGYRN 526
CC + + VP + QP P+E+ GC N
Sbjct: 575 CCKTSVYKDVPAEDQPSPVEIAGCSKMN 602
>SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 613 RPAEPQPRGTRRTEPPYPPSGDGHSDPHG 527
RP P R E P PP + DPHG
Sbjct: 367 RPPPPSARPLTGNEEPLPPGWEQRVDPHG 395
>SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 640 LLQRTIRSKRPAEPQPRGTRRTEPPYPPS 554
L+QR++ +R P PR R PP PPS
Sbjct: 298 LMQRSLLQRRGHPPLPRLRLRLTPPPPPS 326
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGV--GVLIHPQVVMTGAH 681
G +A GE+PW L+ Y G L+H V+T +H
Sbjct: 214 GNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASH 255
>SB_22423| Best HMM Match : ASC (HMM E-Value=1.8e-05)
Length = 348
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 209 KMFRSKAGSKVVSWARPTVTSTASKSE---RIALLLLKHSEKENRQNFTSL--YYE 57
K+ + A S + P VTS +KSE R+ L ++ EK R+N SL YYE
Sbjct: 261 KLSYANAVGNAFSQSLPPVTSEGAKSESYKRLLNLTVEKREKYFRENVVSLDVYYE 316
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAH 681
G A+ ++PW L L+++ G LI+ + V+T AH
Sbjct: 436 GQTAKVEDWPWQAGLKKGLDDTIVCGGSLINREWVVTAAH 475
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +1
Query: 562 GTEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAGEW 732
GT+A GE+PW V+L G G L+ + V+T A RAGEW
Sbjct: 261 GTDAAVGEWPWQVSLYLTHYGPVCG-GTLLTSEWVLTAARCFRD------NKRAGEW 310
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = -2
Query: 631 RTIRSKRPAEPQ-PRGTRRTEPPYPPSGDGHSDPHGVPVAASFNFEGFRLRLWHGFRYGI 455
+++ K PA Q P+ R+ E S H ++ ++ F GF+
Sbjct: 2740 KSVDYKLPAGSQDPQNVRQQETDPKESTSTPKSEHVFGSTSATSYASFGDVAGQGFKAKD 2799
Query: 454 SAADLHALLAVFFAEPDIQHSPPRHAGVINVHPFIVL 344
S A + FAEP SP A I+ P + L
Sbjct: 2800 SKATFAGQGSQLFAEPQCNDSPETEADGIDFAPLVSL 2836
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 419 EDCQ-ESVEICCTNPITEPVPKPQPEPLEVEGCGYRNP 529
+ C+ S +I T P T PV +P P + C NP
Sbjct: 1173 QSCKPSSSQINATEPSTHPVSQPGSSPSQTSTCSQVNP 1210
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,729,830
Number of Sequences: 59808
Number of extensions: 567494
Number of successful extensions: 2371
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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