Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20910
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 37 0.017
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 32 0.49
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 32 0.49
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 30 1.5
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 4.6
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 28 6.0
U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical pr... 28 6.0
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z82263-4|CAB62794.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 8.0
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 28 8.0
U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin... 28 8.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 520 QEPHGGRSDHHRRVG-TEAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAH-IAYK 693
QEP + HR +G +E+ +PW V LL L G G LI P V+T AH A
Sbjct: 46 QEPADYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHRCG-GSLIDPNFVLTAAHCFAKD 104
Query: 694 YAPGNLRARAG 726
P + R G
Sbjct: 105 RRPTSYSVRVG 115
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 634 QRTIRSKRPAEPQPRGTRRTEPPYPPSGD 548
Q+ ++ K P+ P R R+ PPYPP D
Sbjct: 285 QQHMKRKTPSSPSRRSRSRSPPPYPPGHD 313
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 376 GVINVHPFIVLVTQIVGDAF-ARFPVLIRKHAVALRRLNDDVSRFPVP 236
G+ ++P V ++GDA A PV+ K A+ L DDV R VP
Sbjct: 1042 GLNQIYPTPPSVQMLLGDAAQAHSPVMHTKSRYAMNTLEDDVERIAVP 1089
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 376 GVINVHPFIVLVTQIVGDAF-ARFPVLIRKHAVALRRLNDDVSRFPVP 236
G+ ++P V ++GDA A PV+ K A+ L DDV R VP
Sbjct: 1042 GLNQIYPTPPSVQMLLGDAAQAHSPVMHTKSRYAMNTLEDDVERIAVP 1089
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 376 GVINVHPFIVLVTQIVGDAF-ARFPVLIRKHAVALRRLNDDVSRFPVP 236
G+ ++P V ++GDA A PV+ K A+ L DDV R VP
Sbjct: 1042 GLNQIYPTPPSVQMLLGDAAQAHSPVMHTKSRYAMNTLEDDVERIAVP 1089
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 610 PAEPQPRGTRRTEPPYPPSGDGHSDPHGVPVAASFNF 500
P PQ R EP PP G+ HG+P A S NF
Sbjct: 338 PPPPQQRSLLG-EPSGPPMGEMQPIVHGIPSAQSVNF 373
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 610 PAEPQPRGTRRTEPPYPPSGDGHSDPHGVPVAASFNF 500
P PQ R EP PP G+ HG+P A S NF
Sbjct: 338 PPPPQQRSLLG-EPSGPPMGEMQPIVHGIPSAQSVNF 373
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 634 QRTIRSKRPAEPQPRGTRRTEPPYPPSGDGH 542
QR ++ P P TR+ P PP+ DGH
Sbjct: 294 QRVPPTQTRNPPNPTNTRQPSRPVPPTSDGH 324
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 440 EICCTNPITEPVPKPQPEPL 499
++ T P+ EPVP+P PEP+
Sbjct: 107 KVAVTLPVPEPVPEPVPEPV 126
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 607 AEPQPRGTRRTEPPYPPSGDGHSDPHG 527
A+P P GT PP PP DG + P G
Sbjct: 256 AQPSPAGT--PGPPGPPGKDGEAGPDG 280
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 634 QRTIRSKRPAEPQPRGTRRTEPPYPPSGDGHSDP 533
QR RS +P+EP T T PP PP + P
Sbjct: 383 QRNSRSMKPSEPD-YNTYSTHPPRPPPSSSMNYP 415
>U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical
protein T10E9.4 protein.
Length = 649
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 IVKPTESNSVFTDKNGESCKCVPYYLCNKNNE-GVDVNNASVTGWGVLDVRFGEEDCQES 436
+ PT N F D++G + + C K + D+ + V G+ + E DC
Sbjct: 193 VYNPTFKNHRFLDRSGPKESSLQF--CYKQPDLKPDLKHVKVD-LGLKLCHYNE-DCGNE 248
Query: 437 VEICCTNPITEPVPKPQPEPLEVEG 511
EIC + IT QPE + V G
Sbjct: 249 TEICHIDNITVYANVTQPEKIAVPG 273
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 622 RSKRPAEPQPRGTRRTEPPYPPS 554
R P+ P P G RR+ PP PP+
Sbjct: 59 RRSLPSTPLPNGHRRSLPPTPPT 81
>Z82263-4|CAB62794.1| 316|Caenorhabditis elegans Hypothetical
protein C47A4.3 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 507 STSRGSGCGFGTGSVMGLVQQ 445
+ RG+GCGFG SV+ L +
Sbjct: 218 NNQRGAGCGFGRDSVLNLCSE 238
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 706 CPGRTCKRCERQS*RLEDVSGLLLQRTIRSK-RPAEPQPRGTR-RTEPPYPPSGDG 545
CPG C + + +L I + +P PQP TR R PP PP+ DG
Sbjct: 390 CPGGFCAPVPQAPQQERPTPPPVLAPVINTATQPPLPQPYPTRYRPAPPPPPACDG 445
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 458 PITEPVPKPQPEP 496
P+ EP PKP+PEP
Sbjct: 63 PVPEPEPKPEPEP 75
>U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
b protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 458 PITEPVPKPQPEP 496
P+ EP PKP+PEP
Sbjct: 63 PVPEPEPKPEPEP 75
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 492 SGCGFG-TGSVMGLVQQISTLSWQSSSPNLTSSTPHPVTLALLTST 358
SG GF TG + QI L SS+P++ P P T A TST
Sbjct: 1173 SGTGFSFTGDTQQVADQIG-LKMASSNPSVYCPPPVPSTAAPSTST 1217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,765,000
Number of Sequences: 27780
Number of extensions: 407481
Number of successful extensions: 2018
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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