BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20909 (706 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 83 2e-16 Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 47 2e-05 AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 47 2e-05 U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 40 0.002 U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 38 0.009 L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 38 0.009 AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 35 0.049 AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 35 0.049 AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 35 0.065 Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.086 AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 34 0.086 Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.15 U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 30 1.4 U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 30 1.9 U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 30 1.9 AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 30 1.9 Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 29 2.4 L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 29 2.4 AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 29 2.4 AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormo... 29 2.4 Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 28 7.5 Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.5 X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 28 7.5 AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 28 7.5 Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 27 9.9 AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 9.9 >Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical protein F30A10.1 protein. Length = 311 Score = 83.0 bits (196), Expect = 2e-16 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 6/87 (6%) Frame = +1 Query: 13 FTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTY------PEL 174 FT E+L +Y+D T+FT+K+++ +++F AL P KV N P LT+ PEL Sbjct: 130 FTREQLDEYQDCTFFTRKDIIRLYKRFYALNPHKVPTNMQGNRPAITTLTFEEVEKMPEL 189 Query: 175 KVNPFKDRICKVFSSSNDGDCTFEDFL 255 K NPFK RIC+VFS G+ +F+DFL Sbjct: 190 KENPFKRRICEVFSEDGRGNLSFDDFL 216 Score = 77.0 bits (181), Expect = 1e-14 Identities = 36/86 (41%), Positives = 57/86 (66%) Frame = +3 Query: 252 LDMMSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLV 431 LDM SVFSEMAP +K ++AFRI+D+DGD+++G DL ++I+ L E LSD E++ ++ Sbjct: 216 LDMFSVFSEMAPLQLKLKYAFRIYDYDGDELLGHDDLSKMIRSLTRDE--LSDVEVEFII 273 Query: 432 QNVXXXXXXXXXXXXSFAEFEHIIDK 509 + + +FAEFEH++ + Sbjct: 274 ERIIEEADLDGDSSINFAEFEHVVSR 299 >Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical protein F55C10.1 protein. Length = 171 Score = 46.8 bits (106), Expect = 2e-05 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +3 Query: 261 MSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 +S FS K K + AFRI+D D D I +L +V++ + G LK DS++QQ+V Sbjct: 79 ISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGNNLK--DSQLQQIVDKT 136 Query: 441 XXXXXXXXXXXXSFAEFEHIID 506 SF EF +++ Sbjct: 137 ILFHDKDGDGKISFQEFCDVVE 158 Score = 34.7 bits (76), Expect = 0.065 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 109 EKVGHNKNAKLPMAKVLTYPELKVNPFKDRICKVFSSSNDGDCTFEDFLT-*CQFSVR 279 +K+ + + L + + ++ PEL+ NP R+ +F +G+ F +F+ QFSV+ Sbjct: 28 KKLDVDGSGSLSVEEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFREFIQGISQFSVK 85 >AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. Length = 171 Score = 46.8 bits (106), Expect = 2e-05 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +3 Query: 261 MSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 +S FS K K + AFRI+D D D I +L +V++ + G LK DS++QQ+V Sbjct: 79 ISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGNNLK--DSQLQQIVDKT 136 Query: 441 XXXXXXXXXXXXSFAEFEHIID 506 SF EF +++ Sbjct: 137 ILFHDKDGDGKISFQEFCDVVE 158 Score = 34.7 bits (76), Expect = 0.065 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 109 EKVGHNKNAKLPMAKVLTYPELKVNPFKDRICKVFSSSNDGDCTFEDFLT-*CQFSVR 279 +K+ + + L + + ++ PEL+ NP R+ +F +G+ F +F+ QFSV+ Sbjct: 28 KKLDVDGSGSLSVEEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFREFIQGISQFSVK 85 >U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium sensor familyprotein 3 protein. Length = 199 Score = 39.9 bits (89), Expect = 0.002 Identities = 26/95 (27%), Positives = 43/95 (45%) Frame = +1 Query: 10 QFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVNPF 189 + T EE+Q E +TYFTKKE+ ++ F P G K + +P + F Sbjct: 17 KLTTEEVQTLEQVTYFTKKELKKWYKDFVRDCPS--GELKMEEFQGIYKQFFPNGDPSKF 74 Query: 190 KDRICKVFSSSNDGDCTFEDFLT*CQFSVRWLLKQ 294 + VF ++DG +F +F+ + R L + Sbjct: 75 AAFVFNVFDDNHDGHISFSEFIAALSITSRGTLDE 109 >U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium sensor familyprotein 1 protein. Length = 191 Score = 37.5 bits (83), Expect = 0.009 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +1 Query: 1 GKSQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKV 180 G S+ +++D + TYFT+KE+ ++ F P G A +P+ Sbjct: 4 GNSKLKSSQIRDLAEQTYFTEKEIKQWYKGFVRDCPN--GMLTEAGFQKIYKQFFPQGDP 61 Query: 181 NPFKDRICKVFSSSNDGDCTFEDFL 255 + F + KVF + DG F +F+ Sbjct: 62 SDFASFVFKVFDENKDGAIEFHEFI 86 >L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium binding protein protein. Length = 191 Score = 37.5 bits (83), Expect = 0.009 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +1 Query: 1 GKSQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKV 180 G S+ +++D + TYFT+KE+ ++ F P G A +P+ Sbjct: 4 GNSKLKSSQIRDLAEQTYFTEKEIKQWYKGFVRDCPN--GMLTEAGFQKIYKQFFPQGDP 61 Query: 181 NPFKDRICKVFSSSNDGDCTFEDFL 255 + F + KVF + DG F +F+ Sbjct: 62 SDFASFVFKVFDENKDGAIEFHEFI 86 >AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin protein. Length = 149 Score = 35.1 bits (77), Expect = 0.049 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +3 Query: 252 LDMMSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLV 431 L MM+ + + AFR+FD DG+ I ++LR V + L KL+D E+ +++ Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV---MTNLGEKLTDEEVDEMI 126 Query: 432 Q 434 + Sbjct: 127 R 127 >AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin protein 1 protein. Length = 149 Score = 35.1 bits (77), Expect = 0.049 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +3 Query: 252 LDMMSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLV 431 L MM+ + + AFR+FD DG+ I ++LR V + L KL+D E+ +++ Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV---MTNLGEKLTDEEVDEMI 126 Query: 432 Q 434 + Sbjct: 127 R 127 >AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical protein Y73B3A.12 protein. Length = 116 Score = 34.7 bits (76), Expect = 0.065 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = +3 Query: 309 AFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQ 434 AFR+FD DG+ I ++LR V + L KL+D E+ ++++ Sbjct: 38 AFRVFDKDGNGFISAAELRHV---MTNLGEKLTDEEVDEMIR 76 >Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical protein ZK673.7 protein. Length = 160 Score = 34.3 bits (75), Expect = 0.086 Identities = 14/44 (31%), Positives = 30/44 (68%) Frame = +3 Query: 309 AFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 AFR++D +G+ I VSDLR++++ L+ +S+ E+ +++ + Sbjct: 100 AFRLYDKEGNGYINVSDLRDILR---ALDDNVSEEELDEMIAEI 140 >AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C protein. Length = 160 Score = 34.3 bits (75), Expect = 0.086 Identities = 14/44 (31%), Positives = 30/44 (68%) Frame = +3 Query: 309 AFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 AFR++D +G+ I VSDLR++++ L+ +S+ E+ +++ + Sbjct: 100 AFRLYDKEGNGYINVSDLRDILR---ALDDNVSEEELDEMIAEI 140 >Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical protein ZK856.8 protein. Length = 195 Score = 33.5 bits (73), Expect = 0.15 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +1 Query: 19 EEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVNPFKDR 198 +EE+++ T F + +++ + +F +L + G L L PEL VNP DR Sbjct: 11 DEEIEEIMSETEFNRNQIVRLYSRFLSLDKKGQGF-----LSRDDFLNVPELAVNPLGDR 65 Query: 199 ICKVF--SSSNDGD 234 I F +S++GD Sbjct: 66 IVDAFFTLASSNGD 79 >U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical protein F12A10.5 protein. Length = 145 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/41 (34%), Positives = 27/41 (65%) Frame = +3 Query: 312 FRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQ 434 F +FD +GD +I + DL I +C L KL+++E +++++ Sbjct: 86 FNVFDKNGDGVISIDDL---IFVMCQLGEKLTETEAKEMIK 123 >U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger protein protein 1 protein. Length = 381 Score = 29.9 bits (64), Expect = 1.9 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -1 Query: 439 TFCTSCCISESDSFNSSPHRRCITSRKSDTPIMSSPSKSNILNACSAFTAL 287 TFCT C I ++ +SPH C T R + +KSNI N F+ + Sbjct: 44 TFCTEC-IRNVQNYGNSPHLECPTCR--------AETKSNIENVAPNFSIM 85 >U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vitellogenin-linkedtranscript protein 2 protein. Length = 156 Score = 29.9 bits (64), Expect = 1.9 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +3 Query: 267 VFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 V ++ P ++ + F D DGD I S+LR QR + LSD +I+ + ++V Sbjct: 81 VIAKANPLSLSLKAVFEELDVDGDGYITRSELRTAFQR---MGHSLSDQDIKAIYRHV 135 >AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical protein F59D6.7 protein. Length = 213 Score = 29.9 bits (64), Expect = 1.9 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +1 Query: 61 KKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVNPFKDRICKVFSSSNDGD 234 K ++L + +F +L G+ L L PEL VNP DRI F + D D Sbjct: 43 KHQILRLYTRFASLDKNGQGY-----LSRDDFLNVPELAVNPLGDRIIDAFFTLGDSD 95 >Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical protein F10G8.5 protein. Length = 190 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/84 (21%), Positives = 39/84 (46%) Frame = +1 Query: 4 KSQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVN 183 K + ++E+L+ + T FT++++ ++ F P+ GH + +P Sbjct: 7 KPKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPK--GHLTKEQFIKVYKDFFPSGSAE 64 Query: 184 PFKDRICKVFSSSNDGDCTFEDFL 255 F + + + F + N G F++FL Sbjct: 65 GFCEHVFRTFDTDNSGFIDFKEFL 88 >L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium binding protein protein. Length = 190 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/84 (21%), Positives = 39/84 (46%) Frame = +1 Query: 4 KSQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVN 183 K + ++E+L+ + T FT++++ ++ F P+ GH + +P Sbjct: 7 KPKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPK--GHLTKEQFIKVYKDFFPSGSAE 64 Query: 184 PFKDRICKVFSSSNDGDCTFEDFL 255 F + + + F + N G F++FL Sbjct: 65 GFCEHVFRTFDTDNSGFIDFKEFL 88 >AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical protein Y48C3A.3 protein. Length = 321 Score = 29.5 bits (63), Expect = 2.4 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 8/99 (8%) Frame = +1 Query: 7 SQFTEEELQDYEDLTYFTKKEV-------LYAHQKFKALAPEKVGHNKNAKLPMAKVLTY 165 + FTEE Q E L + K V +Y KF A P K N+N K + + + Sbjct: 5 TNFTEEITQWVESLPNWGKAAVAGGVALAVYIPYKFMATRPRKSPLNENWKPDVVYLYQF 64 Query: 166 PELKVNPFKDRIC-KVFSSSNDGDCTFEDFLT*CQFSVR 279 P ++ P C KV + D T+E + C S R Sbjct: 65 PRARLLPNLSPFCMKVETWLRMSDITYE--IPPCSLSTR 101 >AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormone receptor familyprotein 135 protein. Length = 362 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 331 SKSNILNACSAFTALGAISLKTDIMSRSLQRCNLHH 224 S+S I ACSAF +S K+ I R + C +H+ Sbjct: 20 SRSQICRACSAFFRRYVLSPKSAIKCRKDKSCRIHY 55 >Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical protein T23H4.1 protein. Length = 483 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +2 Query: 596 NILISNSIYILWLFYK--SIIFIADLLSYLFGS 688 NI +ILWL+Y S+I +LS++F S Sbjct: 302 NIFTEKIFFILWLWYTMLSLISFGSILSWIFAS 334 >Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical protein C13C12.1 protein. Length = 218 Score = 27.9 bits (59), Expect = 7.5 Identities = 12/44 (27%), Positives = 26/44 (59%) Frame = +3 Query: 309 AFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 AFR+FD DG+ +I + R + + ++ S+ E+ ++++ V Sbjct: 158 AFRVFDKDGNGVITAQEFRYF---MVHMGMQFSEEEVDEMIKEV 198 >X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. Length = 161 Score = 27.9 bits (59), Expect = 7.5 Identities = 12/44 (27%), Positives = 26/44 (59%) Frame = +3 Query: 309 AFRIFDFDGDDMIGVSDLREVIQRLCGLELKLSDSEIQQLVQNV 440 AFR+FD DG+ +I + R + + ++ S+ E+ ++++ V Sbjct: 101 AFRVFDKDGNGVITAQEFRYF---MVHMGMQFSEEEVDEMIKEV 141 >AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical protein Y71H2AL.1 protein. Length = 196 Score = 27.9 bits (59), Expect = 7.5 Identities = 19/69 (27%), Positives = 29/69 (42%) Frame = +1 Query: 7 SQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVNP 186 SQ E EL+ + ++ +L + +F +LA + L + ELK NP Sbjct: 6 SQIPEHELEHLSIESGLSRGGILKLYGRFISLATHRDKTTNEYFLTKGDFQSIAELKQNP 65 Query: 187 FKDRICKVF 213 DRI F Sbjct: 66 LGDRIIDAF 74 >Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical protein F53C11.2 protein. Length = 693 Score = 27.5 bits (58), Expect = 9.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +2 Query: 86 KNSKLWHLRKLVTIKMLNYLWPKCSHIQNLK*IHSKIG 199 K K H+R L I+ L LW +H N K ++ +G Sbjct: 253 KEHKPHHIRSLDCIRALTILWIVFAHTYNFKFPYNNVG 290 >AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical protein T20H9.6 protein. Length = 758 Score = 27.5 bits (58), Expect = 9.9 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 25 ELQDYEDLTYFTKKEVLYAHQKFKA 99 + Q +ED+ Y TKKE+L +K + Sbjct: 518 DFQAFEDMKYLTKKEILELEKKMSS 542 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,611,862 Number of Sequences: 27780 Number of extensions: 317142 Number of successful extensions: 1010 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 927 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1003 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -