Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20907
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3690|AAX52768.1|  271|Drosophila melanogaster CG14457-P...    30   2.5  
DQ231604-1|ABA71710.1|  412|Drosophila melanogaster male accesso...    28   9.9  
AE014134-1923|ABI31306.1|  412|Drosophila melanogaster CG17097-P...    28   9.9  

>AE014296-3690|AAX52768.1|  271|Drosophila melanogaster CG14457-PB,
           isoform B protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 141 DDIDCLRRGLRTFFNLMDSGHYGMTPV---DPIYINSVAIAYPSSN 269
           D ++C    ++  F+ ++ G  G+T +   DP Y+N + I   +SN
Sbjct: 41  DFVNCSTHSIQQLFDKLNDGIPGLTSIRSFDPFYLNRIRITQGNSN 86


>DQ231604-1|ABA71710.1|  412|Drosophila melanogaster male accessory
           gland protein protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 173 NILQPHGFRSLRNDARGPDLHKQCRHRVPE--QQLSFLLRKVIVTGISWTKLVDK 331
           ++++ +G+ S  N     D ++ C HR+P    +   L+  ++ +  SW +L  K
Sbjct: 53  DLIEKYGYPSETNYVTSEDGYRLCLHRIPRPGAEPVLLVHGLMASSASWVELGPK 107


>AE014134-1923|ABI31306.1|  412|Drosophila melanogaster CG17097-PC
           protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 173 NILQPHGFRSLRNDARGPDLHKQCRHRVPE--QQLSFLLRKVIVTGISWTKLVDK 331
           ++++ +G+ S  N     D ++ C HR+P    +   L+  ++ +  SW +L  K
Sbjct: 53  DLIEKYGYPSETNYVTSEDGYRLCLHRIPRPGAEPVLLVHGLMASSASWVELGPK 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,668,027
Number of Sequences: 53049
Number of extensions: 618567
Number of successful extensions: 1447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)