Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20905
(672 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 29 0.026
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 29 0.026
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 29 0.026
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 27 0.14
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 5.3
AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of act... 21 6.9
AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity mod... 21 6.9
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 55 TLSDYNIQKESTLHLVLR 72
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 623 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q IFAGK + D
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLED 432
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 55 TLSDYNIQKESTLHLVLR 72
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 131 TLSDYNIQKESTLHLVLR 148
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 207 TLSDYNIQKESTLHLVLR 224
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 283 TLSDYNIQKESTLHLVLR 300
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 359 TLSDYNIQKESTLHLVLR 376
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 435 TLSDYNIQKESTLHLVLR 452
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 511 TLSDYNIQKESTLHLVLR 528
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 587 TLSDYNIQKESTLHLVLR 604
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 663 TLSDYNIQKESTLHLVLR 680
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 29.5 bits (63), Expect = 0.026
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q IFAGK + D
Sbjct: 63 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLED 100
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 184 LSSKFSTEPEQLCLIFAGKIMND 252
+ K P+Q LIFAGK + D
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLED 24
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 258 TLKQHNIKDGLTVHLVIK 311
TL +NI+ T+HLV++
Sbjct: 27 TLSDYNIQKESTLHLVLR 44
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 430 PRPKLSRPASPPS 392
PRP+ +RP S PS
Sbjct: 408 PRPEWARPPSTPS 420
>AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of
activity of ets genes protein.
Length = 108
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 172 LKEVLSSKFSTEPEQLCLIFAGKIMN 249
L EV SS+F + LCL+ G ++
Sbjct: 57 LPEVPSSRFLMNGKALCLMSLGMFLS 82
>AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity
modulator protein.
Length = 108
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 172 LKEVLSSKFSTEPEQLCLIFAGKIMN 249
L EV SS+F + LCL+ G ++
Sbjct: 57 LPEVPSSRFLMNGKALCLMSLGMFLS 82
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,866
Number of Sequences: 336
Number of extensions: 2945
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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