Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20905
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 59 3e-09
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 58 8e-09
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 29 2.6
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 29 2.6
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 29 2.6
01_06_0031 + 25760878-25761342 29 2.6
12_02_0502 - 19746100-19746185,19746745-19750474 29 3.4
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 29 3.4
09_04_0554 + 18495073-18495175,18495794-18496032 29 3.4
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 29 3.4
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 29 3.4
06_03_1149 + 28018932-28020529,28020989-28021067 29 3.4
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 29 3.4
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 29 3.4
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 29 3.4
05_01_0438 + 3475017-3475484 29 3.4
04_04_1238 + 31997671-31998816 29 3.4
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 29 3.4
02_01_0464 - 3340642-3342015,3342403-3342405 29 3.4
01_03_0108 - 12628711-12629178 29 3.4
11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151... 28 5.9
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 28 5.9
06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,155... 28 5.9
03_05_1129 - 30595580-30595771,30596119-30597162 28 5.9
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 28 5.9
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 59.3 bits (137), Expect = 3e-09
Identities = 22/38 (57%), Positives = 34/38 (89%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQM+D++ RNP+++H+LN+P +LRQT+E ARNP
Sbjct: 194 MIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEAARNP 231
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
L+ NP ++LM N ++ M NPE +RQ
Sbjct: 426 LLNFNPNTRNLMESNTQLREMFQNPEFIRQ 455
>03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 57.6 bits (133), Expect = 8e-09
Identities = 21/38 (55%), Positives = 34/38 (89%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQM++++ RNP+++H+LN+P +LRQT+E ARNP
Sbjct: 895 IIMNNPQMREIVDRNPDLAHVLNDPSILRQTVEAARNP 932
Score = 31.5 bits (68), Expect = 0.63
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
L+ NP ++++M N ++ M NPE +RQ
Sbjct: 1103 LLNINPNVRNMMESNTQLREMFQNPEFVRQ 1132
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK ++D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDD 52
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE I R+KE + K P Q LI+AGK + D
Sbjct: 90 EIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLAD 128
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE I R+KE + K P Q LI+AGK + D
Sbjct: 118 EIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLAD 156
>01_06_0031 + 25760878-25761342
Length = 154
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLED 52
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 117 FNCDRNFFRVVLSLCHFGNSRMTMYFGGK 31
F+CD++ R +L LCH ++ YF GK
Sbjct: 653 FSCDKSHIRSILKLCHLQVFKL-KYFTGK 680
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 395 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 471 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 508
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 55 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 92
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 31 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 68
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 482 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 519
>05_01_0438 + 3475017-3475484
Length = 155
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>04_04_1238 + 31997671-31998816
Length = 381
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 16 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 53
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 92 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 168 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 205
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 244 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 281
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 320 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 357
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 396 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 433
>01_03_0108 - 12628711-12629178
Length = 155
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I +K + K P+Q LIFAGK + D
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>11_01_0191 +
1508509-1508749,1508852-1509204,1509860-1510002,
1510195-1510256,1510406-1510479,1510812-1510864,
1511072-1513550
Length = 1134
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 584 CICGLEVMSYAYSQDHSSSAAPMDCQDLSEHIRV 483
CI G+ V++ S DH S A MD LS + V
Sbjct: 297 CILGMFVLAIYSSSDHLSKTATMDAPFLSTSLAV 330
>08_02_0076 + 11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 585 LHLWVGGDELRIFSGSFIICCTNGLSRLV*AYQ 487
LHLWV GDE FS + C +S L+ AY+
Sbjct: 1536 LHLWVDGDEEDFFSQN---CSDEEISELMFAYR 1565
>06_01_0203 +
1555471-1555523,1555743-1555863,1556340-1556651,
1556806-1556910,1557009-1557466,1557886-1558187,
1558300-1558481,1558893-1559083,1559248-1559381,
1559487-1559725
Length = 698
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 400 GWRVLKAWALVRVLLWISRLECNR 471
GW + AW L V LWIS E NR
Sbjct: 414 GWVMAVAWLLYLVWLWISFKEPNR 437
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK 240
Q+ + EED D KR+ E + +S P Q +I G+
Sbjct: 315 QEADGEEDDDYKRMTEEMCRIYSHAPRQFTIIDRGR 350
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E + +K + K P+Q LIFAGK + D
Sbjct: 15 LEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,236,109
Number of Sequences: 37544
Number of extensions: 322956
Number of successful extensions: 831
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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