Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20905
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein. 73 7e-13
BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein. 73 7e-13
AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein. 73 7e-13
AK023354-1|BAB14539.1| 314|Homo sapiens protein ( Homo sapiens ... 73 7e-13
AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein. 73 7e-13
AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein... 73 7e-13
AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like... 73 7e-13
BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein. 69 1e-11
BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein. 69 1e-11
AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein. 69 1e-11
AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein. 69 1e-11
AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein. 69 1e-11
AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein. 69 1e-11
AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1 v... 69 1e-11
AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein. 69 1e-11
BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein. 67 5e-11
AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein pr... 67 5e-11
AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein. 67 5e-11
AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein. 67 5e-11
AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product ... 67 5e-11
BC036743-1|AAH36743.1| 655|Homo sapiens ubiquilin 3 protein. 59 2e-08
AF230481-1|AAF67143.1| 655|Homo sapiens ubiquilin 3 protein. 59 2e-08
AF137396-1|AAG41675.1| 670|Homo sapiens ubiquilin 3 protein. 59 2e-08
AB015344-1|BAA34801.1| 408|Homo sapiens HRIHFB2157 protein. 51 4e-06
AL355388-13|CAH72634.1| 226|Homo sapiens ubiquilin 4 protein. 40 0.006
BC034977-1|AAH34977.2| 475|Homo sapiens ubiquilin-like protein. 40 0.011
BC012183-1|AAH12183.2| 475|Homo sapiens ubiquilin-like protein. 40 0.011
AK127987-1|BAC87218.1| 630|Homo sapiens protein ( Homo sapiens ... 40 0.011
CR407662-1|CAG28590.1| 81|Homo sapiens NEDD8 protein. 35 0.23
D23662-1|BAA04889.1| 81|Homo sapiens ubiquitin-like protein pr... 35 0.30
BC104664-1|AAI04665.1| 81|Homo sapiens neural precursor cell e... 35 0.30
BC104201-1|AAI04202.1| 81|Homo sapiens neural precursor cell e... 35 0.30
BC104200-1|AAI04201.1| 81|Homo sapiens neural precursor cell e... 35 0.30
EF375726-1|ABN46990.1| 465|Homo sapiens parkin 2 protein. 34 0.40
BC022014-1|AAH22014.1| 387|Homo sapiens PARK2 protein protein. 34 0.40
AL445215-3|CAH73683.1| 316|Homo sapiens Parkinson disease (auto... 34 0.40
AL445215-2|CAH73682.1| 437|Homo sapiens Parkinson disease (auto... 34 0.40
AL445215-1|CAH73681.1| 465|Homo sapiens Parkinson disease (auto... 34 0.40
AL132982-3|CAI23603.1| 316|Homo sapiens Parkinson disease (auto... 34 0.40
AL132982-2|CAI23602.1| 437|Homo sapiens Parkinson disease (auto... 34 0.40
AL132982-1|CAI23601.1| 465|Homo sapiens Parkinson disease (auto... 34 0.40
AL035697-4|CAI21387.1| 316|Homo sapiens Parkinson disease (auto... 34 0.40
AL035697-3|CAI21386.1| 437|Homo sapiens Parkinson disease (auto... 34 0.40
AL035697-2|CAI21385.1| 465|Homo sapiens Parkinson disease (auto... 34 0.40
AL035697-1|CAI21384.1| 368|Homo sapiens Parkinson disease (auto... 34 0.40
AB245403-1|BAF43729.1| 465|Homo sapiens parkin 2 protein. 34 0.40
AB009973-1|BAA25751.1| 465|Homo sapiens Parkin protein. 34 0.40
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 31 3.8
AK130833-1|BAC85442.1| 123|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK056939-1|BAB71316.1| 388|Homo sapiens protein ( Homo sapiens ... 30 6.6
>BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 218 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 178 FMELQQQMQRQLMSNPEMLSQIM 200
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 189 LMSNPEMLSQIMENPLVQDMMSNPDLMR 216
>BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 218 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 178 FMELQQQMQRQLMSNPEMLSQIM 200
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 189 LMSNPEMLSQIMENPLVQDMMSNPDLMR 216
>AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 218 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 178 FMELQQQMQRQLMSNPEMLSQIM 200
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 189 LMSNPEMLSQIMENPLVQDMMSNPDLMR 216
>AK023354-1|BAB14539.1| 314|Homo sapiens protein ( Homo sapiens
cDNA FLJ13292 fis, clone OVARC1001180, weakly similar to
UBIQUITIN-LIKE PROTEIN DSK2. ).
Length = 314
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 218 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 178 FMELQQQMQRQLMSNPEMLSQIM 200
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 189 LMSNPEMLSQIMENPLVQDMMSNPDLMR 216
>AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein.
Length = 601
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 218 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ+ ++SNP+ML Q++
Sbjct: 178 FMELQQQMQRHVMSNPEMLSQIM 200
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 189 VMSNPEMLSQIMENPLVQDMMSNPDLMR 216
>AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein
protein.
Length = 444
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 61 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 98
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 21 FMELQQQMQRQLMSNPEMLSQIM 43
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 32 LMSNPEMLSQIMENPLVQDMMSNPDLMR 59
>AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like
interacting protein variant protein.
Length = 600
Score = 73.3 bits (172), Expect = 7e-13
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I +NPQMQ LM RNPEISHMLNNPEL+RQTMELARNP
Sbjct: 217 MIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 254
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 23 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 62
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 64 DTLNQHGIKDGLTVHLVIK 82
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
FM+LQ +MQ++L+SNP+ML Q++
Sbjct: 177 FMELQQQMQRQLMSNPEMLSQIM 199
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLR 645
+ SNP+M + NP + M++NP+L+R
Sbjct: 188 LMSNPEMLSQIMENPLVQDMMSNPDLMR 215
>BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+N +L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNHDLMRQ 207
>BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens
cDNA FLJ90054 fis, clone HEMBA1002992, weakly similar to
UBIQUITIN-LIKE PROTEIN DSK2. ).
Length = 316
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein.
Length = 589
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein.
Length = 589
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 89 DTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFG 148
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 149 LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIM 190
Score = 39.9 bits (89), Expect = 0.008
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1
variant protein.
Length = 325
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 114 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 151
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 85 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 113
Score = 33.1 bits (72), Expect = 0.93
Identities = 12/23 (52%), Positives = 21/23 (91%)
Frame = +3
Query: 441 FMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQ++LLSNP+M+ Q++
Sbjct: 74 FSELQSQMQRQLLSNPEMMVQIM 96
>AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein.
Length = 589
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISHMLNNP+++RQT+ELARNP
Sbjct: 208 LIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F + +QL LIFAGKI+ D
Sbjct: 48 EEFAVPENSSVQQSKEEISKRFKSHTDQLVLIFAGKILKD 87
Score = 38.7 bits (86), Expect = 0.019
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Frame = +3
Query: 165 QKTQRSVVFKIQYRTRTIMSYFRRENHE*CDTLKQHNIKDGLTVHLVIKXXXXXXXXXXX 344
Q+++ + + + T ++ F + + DT QH I DGLTVHLVIK
Sbjct: 59 QQSKEEISKRFKSHTDQLVLIFAGKILKDQDTSSQHGIHDGLTVHLVIKTQNRPQDHSAQ 118
Query: 345 XXXXXDVSAT-----------------PFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQE 473
+ T PF F +LQ++MQ++
Sbjct: 119 QTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQ 178
Query: 474 LLSNPDMLRQVL 509
LLSNP+M+ Q++
Sbjct: 179 LLSNPEMMVQIM 190
Score = 33.5 bits (73), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ SNP+M + NP + ML+NP+L+RQ
Sbjct: 179 LLSNPEMMVQIMENPFVQSMLSNPDLMRQ 207
>BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein.
Length = 624
Score = 67.3 bits (157), Expect = 5e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 204 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F ++ +QL LIFAGKI+ D
Sbjct: 44 EEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKD 83
Score = 37.9 bits (84), Expect = 0.033
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 85 DTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFG 144
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQQ+L+++P+M+ Q++
Sbjct: 145 LGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIM 186
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ ++P+M + NP + ML+NP+L+RQ
Sbjct: 175 LMASPEMMIQIMENPFVQSMLSNPDLMRQ 203
>AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein
protein.
Length = 588
Score = 67.3 bits (157), Expect = 5e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 168 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 205
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F ++ +QL LIFAGKI+ D
Sbjct: 8 EEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKD 47
Score = 37.9 bits (84), Expect = 0.033
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 49 DTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFG 108
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQQ+L+++P+M+ Q++
Sbjct: 109 LGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIM 150
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ ++P+M + NP + ML+NP+L+RQ
Sbjct: 139 LMASPEMMIQIMENPFVQSMLSNPDLMRQ 167
>AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein.
Length = 624
Score = 67.3 bits (157), Expect = 5e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 204 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F ++ +QL LIFAGKI+ D
Sbjct: 44 EEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKD 83
Score = 37.9 bits (84), Expect = 0.033
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 85 DTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFG 144
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQQ+L+++P+M+ Q++
Sbjct: 145 LGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIM 186
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ ++P+M + NP + ML+NP+L+RQ
Sbjct: 175 LMASPEMMIQIMENPFVQSMLSNPDLMRQ 203
>AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein.
Length = 624
Score = 67.3 bits (157), Expect = 5e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 204 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F ++ +QL LIFAGKI+ D
Sbjct: 44 EEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKD 83
Score = 37.9 bits (84), Expect = 0.033
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 85 DTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFG 144
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQQ+L+++P+M+ Q++
Sbjct: 145 LGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIM 186
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ ++P+M + NP + ML+NP+L+RQ
Sbjct: 175 LMASPEMMIQIMENPFVQSMLSNPDLMRQ 203
>AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product
Chap1/Dsk2 protein.
Length = 624
Score = 67.3 bits (157), Expect = 5e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
LI +NPQMQ L+ RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 204 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
++ + E++ +++ KE +S +F ++ +QL LIFAGKI+ D
Sbjct: 44 EEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKD 83
Score = 37.9 bits (84), Expect = 0.033
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIKXXXXXXXXXXXXXXXXDVSAT-----------------PFX 383
DTL QH I DGLTVHLVIK + T PF
Sbjct: 85 DTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFG 144
Query: 384 XXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSNPDMLRQVL 509
F +LQ++MQQ+L+++P+M+ Q++
Sbjct: 145 LGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIM 186
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHMLNNPELLRQ 648
+ ++P+M + NP + ML+NP+L+RQ
Sbjct: 175 LMASPEMMIQIMENPFVQSMLSNPDLMRQ 203
>BC036743-1|AAH36743.1| 655|Homo sapiens ubiquilin 3 protein.
Length = 655
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
L+ NP MQ L+ NPEI H+LNNPE++RQT+E RNP
Sbjct: 190 LVLDNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNP 227
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+ + + I++LKE +S +F P+QL LIFAGKI+ D
Sbjct: 33 EDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKD 72
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
D+L Q ++DGLTVHLVIK
Sbjct: 74 DSLAQCGVRDGLTVHLVIK 92
>AF230481-1|AAF67143.1| 655|Homo sapiens ubiquilin 3 protein.
Length = 655
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
L+ NP MQ L+ NPEI H+LNNPE++RQT+E RNP
Sbjct: 190 LVLDNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNP 227
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+ + + I++LKE +S +F P+QL LIFAGKI+ D
Sbjct: 33 EDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKD 72
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
D+L Q ++DGLTVHLVIK
Sbjct: 74 DSLAQCGVRDGLTVHLVIK 92
>AF137396-1|AAG41675.1| 670|Homo sapiens ubiquilin 3 protein.
Length = 670
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
L+ NP MQ L+ NPEI H+LNNPE++RQT+E RNP
Sbjct: 205 LVLDNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNP 242
Score = 41.5 bits (93), Expect = 0.003
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+ + + I++LKE +S +F P+QL LIFAGKI+ D
Sbjct: 48 EDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKD 87
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
D+L Q ++DGLTVHLVIK
Sbjct: 89 DSLAQCGVRDGLTVHLVIK 107
>AB015344-1|BAA34801.1| 408|Homo sapiens HRIHFB2157 protein.
Length = 408
Score = 50.8 bits (116), Expect = 4e-06
Identities = 19/25 (76%), Positives = 25/25 (100%)
Frame = +1
Query: 598 RNPEISHMLNNPELLRQTMELARNP 672
RNPEISH+LNNP+++RQT+E+ARNP
Sbjct: 1 RNPEISHLLNNPDIMRQTLEIARNP 25
>AL355388-13|CAH72634.1| 226|Homo sapiens ubiquilin 4 protein.
Length = 226
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 133 QQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++ I + A +K KE +S +F + +QL LIFAGKI+ D
Sbjct: 24 EEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKD 63
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
DTL QH IKDGLTVHLVIK
Sbjct: 65 DTLNQHGIKDGLTVHLVIK 83
>BC034977-1|AAH34977.2| 475|Homo sapiens ubiquilin-like protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.011
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHML-NNPELLRQTMELARN 669
I+ + Q LM +NPE+S +L +N E+L QT+ELARN
Sbjct: 195 ISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARN 231
>BC012183-1|AAH12183.2| 475|Homo sapiens ubiquilin-like protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.011
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHML-NNPELLRQTMELARN 669
I+ + Q LM +NPE+S +L +N E+L QT+ELARN
Sbjct: 195 ISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARN 231
>AK127987-1|BAC87218.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ46103 fis, clone TESTI2023903, weakly similar
to Homo sapiens ubiquilin 1 (UBQLN1). ).
Length = 630
Score = 39.5 bits (88), Expect = 0.011
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 562 ITSNPQMQDLMSRNPEISHML-NNPELLRQTMELARN 669
I+ + Q LM +NPE+S +L +N E+L QT+ELARN
Sbjct: 350 ISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARN 386
>CR407662-1|CAG28590.1| 81|Homo sapiens NEDD8 protein.
Length = 81
Score = 35.1 bits (77), Expect = 0.23
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+V+IE ++R+KE + K P+Q LI++GK MND
Sbjct: 14 EVDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMND 52
>D23662-1|BAA04889.1| 81|Homo sapiens ubiquitin-like protein
protein.
Length = 81
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE ++R+KE + K P+Q LI++GK MND
Sbjct: 14 EIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMND 52
>BC104664-1|AAI04665.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE ++R+KE + K P+Q LI++GK MND
Sbjct: 14 EIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMND 52
>BC104201-1|AAI04202.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE ++R+KE + K P+Q LI++GK MND
Sbjct: 14 EIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMND 52
>BC104200-1|AAI04201.1| 81|Homo sapiens neural precursor cell
expressed, developmentally down-regulated 8 protein.
Length = 81
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE ++R+KE + K P+Q LI++GK MND
Sbjct: 14 EIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMND 52
>EF375726-1|ABN46990.1| 465|Homo sapiens parkin 2 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>BC022014-1|AAH22014.1| 387|Homo sapiens PARK2 protein protein.
Length = 387
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL445215-3|CAH73683.1| 316|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)core domain 3 (WFDC3)
protein.
Length = 316
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL445215-2|CAH73682.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)eta protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL445215-1|CAH73681.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)ier family 9
(sodium\/hydrogen protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL132982-3|CAI23603.1| 316|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)visiae) protein.
Length = 316
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL132982-2|CAI23602.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)rate protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL132982-1|CAI23601.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)lo2, SUR4/Elo3,
yeast)-like 4 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL035697-4|CAI21387.1| 316|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)r 1 protein.
Length = 316
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL035697-3|CAI21386.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)r 1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL035697-2|CAI21385.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)adenine nucleotide
translocato protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AL035697-1|CAI21384.1| 368|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)family, member 1 protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AB245403-1|BAF43729.1| 465|Homo sapiens parkin 2 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AB009973-1|BAA25751.1| 465|Homo sapiens Parkin protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGK-IMND 252
VE++ D I +LKEV++ + +QL +IFAGK + ND
Sbjct: 15 VEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRND 53
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 419 LGPWSEYFYGSPG*NATGTSVQP*YAQTSLDNPLVQQMMNDPENMRSSSPPTHKCKISCL 598
LGPWS+Y +P + G S L P+ +N PE + PP C++SCL
Sbjct: 1044 LGPWSQY---APPEWSQGDSGAKGGKVKLLGKPVQMPSLNWPEAL---PPPPPSCELSCL 1097
Query: 599 E 601
E
Sbjct: 1098 E 1098
>AK130833-1|BAC85442.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ27323 fis, clone TMS07977. ).
Length = 123
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +2
Query: 8 CLSRINFT--FPPKYIVILELPKWQ 76
CL+R+NF FPP+ V+L LP W+
Sbjct: 74 CLARLNFNIFFPPRVRVLLCLPGWR 98
>AK056939-1|BAB71316.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ32377 fis, clone SKMUS1000014, highly similar to
Polyubiquitin 9. ).
Length = 388
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDAIP*SNT 273
+E+E I+ +K + K P+Q LIFAGK + D S+T
Sbjct: 289 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDT 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,362,806
Number of Sequences: 237096
Number of extensions: 1724790
Number of successful extensions: 4482
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4469
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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