Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20905
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 58 4e-09
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 36 0.026
Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 29 2.3
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 29 2.3
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 29 2.3
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 29 2.3
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 29 2.3
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 27 9.2
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 139 MDNPITQQLLGNPEFMRT 156
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 139 MDNPITQQLLGNPEFMRT 156
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 139 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 176
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 121 MDNPITQQLLGNPEFMRT 138
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 139 MDNPITQQLLGNPEFMRT 156
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 139 MDNPITQQLLGNPEFMRT 156
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 139 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 176
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 121 MDNPITQQLLGNPEFMRT 138
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 559 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNP 672
+I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNP 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 VEIEEDADIKRLKE-VLSSKFSTEPEQLCLIFAGKIMND 252
VEI DA + LK+ VL + EQ+C+I+ GKI+ D
Sbjct: 21 VEIAADASVSELKDKVLVFVPTANKEQVCIIYTGKILKD 59
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 255 DTLKQHNIKDGLTVHLVIK 311
+TL QH I DG TVHLVI+
Sbjct: 61 ETLTQHKIADGHTVHLVIR 79
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 506 LDNPLVQQMMNDPENMRS 559
+DNP+ QQ++ +PE MR+
Sbjct: 139 MDNPITQQLLGNPEFMRT 156
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 136 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+++IE + ++R+KE + K P Q LIFAGK MND
Sbjct: 14 ELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMND 52
>Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical
protein F10B5.3 protein.
Length = 471
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 428 WSEYFYGSPG*NATGTSVQP*YAQTSLDNPLVQQMMNDPENMRSSSPPT 574
WS F+ + N TGT P Q+ +N Q + P +S+PPT
Sbjct: 178 WSNPFFSALFGNTTGTPSLPFSPQSDTENSRTQSEGSSPRANSTSTPPT 226
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 547 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 623 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 699 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 775 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 243 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 319 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 471 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 508
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 547 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 584
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 623 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 660
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 699 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 736
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 775 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 812
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 139 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMND 252
+E+E I+ +K + K P+Q LIFAGK + D
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 574 PQMQDLMSRNPEISHMLNNPELLRQTME 657
P MQDL R+PEI+ M + E L + ++
Sbjct: 53 PVMQDLADRHPEINKMYGSAEELWENLK 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,639,035
Number of Sequences: 27780
Number of extensions: 274469
Number of successful extensions: 728
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -