Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20903
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058719-1|AAL13948.1|  316|Drosophila melanogaster LD46256p pro...    31   1.0  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    31   1.0  
BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p pro...    29   5.4  
AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-P...    29   5.4  

>AY058719-1|AAL13948.1|  316|Drosophila melanogaster LD46256p
           protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +1

Query: 259 ANVPVATDIMATVTCQKVHITPRTVVSGTEKATASREDTRDAVEEL---LEEQHAVRLGL 429
           ++VP  T+IM     QK+   P+T+       TAS ED  D ++E+     EQH V +  
Sbjct: 250 SSVPTITEIMPVDILQKLGPLPKTLDVDDGGGTASPEDISDDLKEVEAKPAEQHVVGVKP 309

Query: 430 PALNTTQ 450
             L  TQ
Sbjct: 310 QLLVETQ 316


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
            protein.
          Length = 1929

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +1

Query: 259  ANVPVATDIMATVTCQKVHITPRTVVSGTEKATASREDTRDAVEEL---LEEQHAVRLGL 429
            ++VP  T+IM     QK+   P+T+       TAS ED  D ++E+     EQH V +  
Sbjct: 1863 SSVPTITEIMPVDILQKLGPLPKTLDVDDGGGTASPEDISDDLKEVEAKPAEQHVVGVKP 1922

Query: 430  PALNTTQ 450
              L  TQ
Sbjct: 1923 QLLVETQ 1929


>BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p
           protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 171 IGADKVVITKTDRTGKAFKTDNMTATKIACERTGGDGYYGNGDVSE 308
           IGAD VV     +TG  F TD     K  C  +GG G   +  +SE
Sbjct: 328 IGADAVVAWVDPQTGNGFATDYFLEGKAQC--SGGRGACPDTKISE 371


>AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-PB,
           isoform B protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 171 IGADKVVITKTDRTGKAFKTDNMTATKIACERTGGDGYYGNGDVSE 308
           IGAD VV     +TG  F TD     K  C  +GG G   +  +SE
Sbjct: 328 IGADAVVAWVDPQTGNGFATDYFLEGKAQC--SGGRGACPDTKISE 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,856,901
Number of Sequences: 53049
Number of extensions: 431229
Number of successful extensions: 1330
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)