Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20902
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L34587-1|AAA67650.1| 112|Homo sapiens RNA polymerase II elongat... 121 3e-27
BC100283-1|AAI00284.1| 112|Homo sapiens transcription elongatio... 121 3e-27
BC100028-1|AAI00029.1| 112|Homo sapiens TCEB1 protein protein. 121 3e-27
BC093065-1|AAH93065.1| 112|Homo sapiens TCEB1 protein protein. 121 3e-27
BC013809-1|AAH13809.1| 112|Homo sapiens transcription elongatio... 121 3e-27
AC005756-1|AAC62260.1| 120|Homo sapiens fos39347_1 protein. 75 4e-13
DQ100801-1|AAZ08808.1| 131|Homo sapiens immunoglobulin heavy ch... 31 3.3
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 31 4.3
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 31 4.3
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 31 4.3
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 31 4.3
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 31 4.3
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 31 4.3
BC037291-1|AAH37291.1| 721|Homo sapiens GYLTL1B protein protein. 30 10.0
AK096021-1|BAC04675.1| 721|Homo sapiens protein ( Homo sapiens ... 30 10.0
AK092526-1|BAC03909.1| 274|Homo sapiens ene. protein. 30 10.0
>L34587-1|AAA67650.1| 112|Homo sapiens RNA polymerase II elongation
factor SIII, p15 subunit protein.
Length = 112
Score = 121 bits (291), Expect = 3e-27
Identities = 58/69 (84%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNL- 256
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVN
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 257 ERYHHTYSK 283
E H SK
Sbjct: 64 EIPSHVLSK 72
Score = 106 bits (254), Expect = 9e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC100283-1|AAI00284.1| 112|Homo sapiens transcription elongation
factor B (SIII), polypeptide 1 (15kDa, elongin C)
protein.
Length = 112
Score = 121 bits (291), Expect = 3e-27
Identities = 58/69 (84%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNL- 256
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVN
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 257 ERYHHTYSK 283
E H SK
Sbjct: 64 EIPSHVLSK 72
Score = 106 bits (254), Expect = 9e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC100028-1|AAI00029.1| 112|Homo sapiens TCEB1 protein protein.
Length = 112
Score = 121 bits (291), Expect = 3e-27
Identities = 58/69 (84%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNL- 256
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVN
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 257 ERYHHTYSK 283
E H SK
Sbjct: 64 EIPSHVLSK 72
Score = 106 bits (254), Expect = 9e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC093065-1|AAH93065.1| 112|Homo sapiens TCEB1 protein protein.
Length = 112
Score = 121 bits (291), Expect = 3e-27
Identities = 58/69 (84%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNL- 256
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVN
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 257 ERYHHTYSK 283
E H SK
Sbjct: 64 EIPSHVLSK 72
Score = 106 bits (254), Expect = 9e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC013809-1|AAH13809.1| 112|Homo sapiens transcription elongation
factor B (SIII), polypeptide 1 (15kDa, elongin C)
protein.
Length = 112
Score = 121 bits (291), Expect = 3e-27
Identities = 58/69 (84%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNL- 256
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVN
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 257 ERYHHTYSK 283
E H SK
Sbjct: 64 EIPSHVLSK 72
Score = 106 bits (254), Expect = 9e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>AC005756-1|AAC62260.1| 120|Homo sapiens fos39347_1 protein.
Length = 120
Score = 74.5 bits (175), Expect = 4e-13
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +2
Query: 80 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
EEK G GPDAM KLVSSD +FIVKREH SG KA+LSGPGQ AENE ++VN
Sbjct: 4 EEKSCSGYGGPDAMDGKLVSSDDDDFIVKREHTRASGIRKAVLSGPGQSAENETDQVN 61
Score = 57.2 bits (132), Expect = 6e-08
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +1
Query: 265 PSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 402
P H K C+YFTYKV Y+NSSTEIPEF ALEVLMA++FLD
Sbjct: 71 PKHA--KACIYFTYKVHYSNSSTEIPEF----LTALEVLMASDFLD 110
>DQ100801-1|AAZ08808.1| 131|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 131
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -1
Query: 306 VREVHADFLEYV*WYLSKLTS-LASFSANWPGPLSIALIVPDIRACSLFTMNSCPSEDTS 130
VR+ LE+V + SK ++A+ G +I+ D ++ + MNS +EDT+
Sbjct: 37 VRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISR--DDSKSIAYLQMNSLKTEDTA 94
Query: 129 FTYIASGPSHPPYTFSS 79
Y GP+ Y F S
Sbjct: 95 VYYCTRGPAEEYYDFWS 111
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F V E A S TIK ML G E + + V L + KK
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 57
>BC037291-1|AAH37291.1| 721|Homo sapiens GYLTL1B protein protein.
Length = 721
Score = 29.9 bits (64), Expect = 10.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 261 LSKLTSLASFSANWPGPLSIALIVPDIRA 175
+ +L L + +WPGP+S+AL + D A
Sbjct: 440 MDRLQMLEALCRHWPGPMSLALYLTDAEA 468
>AK096021-1|BAC04675.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ38702 fis, clone KIDNE2002262, moderately
similar to Glycosyltransferase. ).
Length = 721
Score = 29.9 bits (64), Expect = 10.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 261 LSKLTSLASFSANWPGPLSIALIVPDIRA 175
+ +L L + +WPGP+S+AL + D A
Sbjct: 440 MDRLQMLEALCRHWPGPMSLALYLTDAEA 468
>AK092526-1|BAC03909.1| 274|Homo sapiens ene. protein.
Length = 274
Score = 29.9 bits (64), Expect = 10.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 261 LSKLTSLASFSANWPGPLSIALIVPDIRA 175
+ +L L + +WPGP+S+AL + D A
Sbjct: 152 MDRLQMLEALCRHWPGPMSLALYLTDAEA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,056,009
Number of Sequences: 237096
Number of extensions: 2190441
Number of successful extensions: 6348
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6345
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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