Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20902
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113630-1|AAM29635.1| 117|Drosophila melanogaster RH71704p pro... 116 4e-26
AY070956-1|AAL48578.1| 117|Drosophila melanogaster RE05591p pro... 116 4e-26
AE013599-2890|AAF57557.1| 117|Drosophila melanogaster CG9291-PB... 116 4e-26
AE013599-2889|AAF57558.3| 117|Drosophila melanogaster CG9291-PA... 116 4e-26
AB007693-1|BAA24287.1| 98|Drosophila melanogaster Elongin C pr... 108 9e-24
AY070797-1|AAL48419.2| 182|Drosophila melanogaster AT18217p pro... 30 3.8
AE014298-2939|AAF49021.1| 158|Drosophila melanogaster CG12700-P... 30 3.8
AY051849-1|AAK93273.1| 403|Drosophila melanogaster LD35155p pro... 29 5.0
AF220068-1|AAF64676.1| 158|Drosophila melanogaster SKPC protein. 29 5.0
AE014298-2940|AAF49022.2| 158|Drosophila melanogaster CG11941-P... 29 5.0
AE014298-2477|AAF48663.1| 403|Drosophila melanogaster CG9609-PA... 29 5.0
Y15513-1|CAA75667.1| 328|Drosophila melanogaster Prodos protein... 29 6.6
AY071604-1|AAL49226.1| 328|Drosophila melanogaster RE65343p pro... 29 6.6
AE014298-2666|AAF48800.1| 328|Drosophila melanogaster CG7128-PA... 29 6.6
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro... 29 8.7
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein. 29 8.7
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein. 29 8.7
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein. 29 8.7
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein. 29 8.7
AY118610-1|AAM49979.1| 171|Drosophila melanogaster LP10147p pro... 29 8.7
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB... 29 8.7
AE013599-3606|AAF47006.1| 171|Drosophila melanogaster CG12227-P... 29 8.7
>AY113630-1|AAM29635.1| 117|Drosophila melanogaster RH71704p
protein.
Length = 117
Score = 116 bits (278), Expect = 4e-26
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +2
Query: 83 EKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
+K+YGGCEGPDAMYVKL+SSDGHEF+VKREHAL SGTI+AMLSGPGQFAENEANEV+
Sbjct: 10 DKIYGGCEGPDAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVH 66
Score = 108 bits (259), Expect = 9e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 68 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 117
>AY070956-1|AAL48578.1| 117|Drosophila melanogaster RE05591p
protein.
Length = 117
Score = 116 bits (278), Expect = 4e-26
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +2
Query: 83 EKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
+K+YGGCEGPDAMYVKL+SSDGHEF+VKREHAL SGTI+AMLSGPGQFAENEANEV+
Sbjct: 10 DKIYGGCEGPDAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVH 66
Score = 108 bits (259), Expect = 9e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 68 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 117
>AE013599-2890|AAF57557.1| 117|Drosophila melanogaster CG9291-PB,
isoform B protein.
Length = 117
Score = 116 bits (278), Expect = 4e-26
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +2
Query: 83 EKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
+K+YGGCEGPDAMYVKL+SSDGHEF+VKREHAL SGTI+AMLSGPGQFAENEANEV+
Sbjct: 10 DKIYGGCEGPDAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVH 66
Score = 108 bits (259), Expect = 9e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 68 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 117
>AE013599-2889|AAF57558.3| 117|Drosophila melanogaster CG9291-PA,
isoform A protein.
Length = 117
Score = 116 bits (278), Expect = 4e-26
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +2
Query: 83 EKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
+K+YGGCEGPDAMYVKL+SSDGHEF+VKREHAL SGTI+AMLSGPGQFAENEANEV+
Sbjct: 10 DKIYGGCEGPDAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVH 66
Score = 108 bits (259), Expect = 9e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 68 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 117
>AB007693-1|BAA24287.1| 98|Drosophila melanogaster Elongin C
protein.
Length = 98
Score = 108 bits (259), Expect = 9e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 256 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 405
REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 49 REIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 98
Score = 93.5 bits (222), Expect = 3e-19
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +2
Query: 113 DAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 253
DAMYVKL+SSDGHEF+VKREHAL SGTI+AMLSGPGQFAENEANEV+
Sbjct: 1 DAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVH 47
>AY070797-1|AAL48419.2| 182|Drosophila melanogaster AT18217p
protein.
Length = 182
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 113 DAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEV 250
DA +KL SSDG F + + A +S TIK ML EN+ N V
Sbjct: 26 DAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSA--VENDENAV 69
>AE014298-2939|AAF49021.1| 158|Drosophila melanogaster CG12700-PA
protein.
Length = 158
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 113 DAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEV 250
DA +KL SSDG F + + A +S TIK ML EN+ N V
Sbjct: 2 DAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSA--VENDENAV 45
>AY051849-1|AAK93273.1| 403|Drosophila melanogaster LD35155p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 242 NEVNLERYHHTYSKKSACTSR---TRYAIPTRLQRY-QSFRSLPRSPSK 376
++++ YHHT KK AC+ Y+I T L+R+ +S P S +K
Sbjct: 50 DQLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAK 98
>AF220068-1|AAF64676.1| 158|Drosophila melanogaster SKPC protein.
Length = 158
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 113 DAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEV 250
DA +KL SSDG F + A +S TIK ML EN+ N +
Sbjct: 2 DAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSA--VENDENAI 45
>AE014298-2940|AAF49022.2| 158|Drosophila melanogaster CG11941-PA
protein.
Length = 158
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 113 DAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEV 250
DA +KL SSDG F + A +S TIK ML EN+ N +
Sbjct: 2 DAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSA--VENDENAI 45
>AE014298-2477|AAF48663.1| 403|Drosophila melanogaster CG9609-PA
protein.
Length = 403
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 242 NEVNLERYHHTYSKKSACTSR---TRYAIPTRLQRY-QSFRSLPRSPSK 376
++++ YHHT KK AC+ Y+I T L+R+ +S P S +K
Sbjct: 50 DQLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAK 98
>Y15513-1|CAA75667.1| 328|Drosophila melanogaster Prodos protein
protein.
Length = 328
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 162 TMNSCPSEDTSFTYIASGPSHPPYTFSSPP 73
T N P+ED F IA P+ PPY + P
Sbjct: 182 TNNLFPTEDNMFPLIACKPAFPPYAAALNP 211
>AY071604-1|AAL49226.1| 328|Drosophila melanogaster RE65343p
protein.
Length = 328
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 162 TMNSCPSEDTSFTYIASGPSHPPYTFSSPP 73
T N P+ED F IA P+ PPY + P
Sbjct: 182 TNNLFPTEDNMFPLIACKPAFPPYAAALNP 211
>AE014298-2666|AAF48800.1| 328|Drosophila melanogaster CG7128-PA
protein.
Length = 328
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 162 TMNSCPSEDTSFTYIASGPSHPPYTFSSPP 73
T N P+ED F IA P+ PPY + P
Sbjct: 182 TNNLFPTEDNMFPLIACKPAFPPYAAALNP 211
>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
protein.
Length = 1105
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 185 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 221
>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 381 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 417
>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 381 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 417
>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 381 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 417
>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 381 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 417
>AY118610-1|AAM49979.1| 171|Drosophila melanogaster LP10147p
protein.
Length = 171
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F E A S TIK +L AEN+ + L + T KK
Sbjct: 4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEND-TLIPLPNVNSTILKK 56
>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
protein.
Length = 1413
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 HNELMSIRGYQFHIHSIWTFTSSIHLLFTTDTARSTS 53
++EL ++R + + W F S+ L T T+RST+
Sbjct: 381 YHELQAVRSSGYQLQDKWFFEGSMGLALTPVTSRSTA 417
>AE013599-3606|AAF47006.1| 171|Drosophila melanogaster CG12227-PA
protein.
Length = 171
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 125 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNLERYHHTYSKK 286
+KL SSDG F E A S TIK +L AEN+ + L + T KK
Sbjct: 4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEND-TLIPLPNVNSTILKK 56
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,363,179
Number of Sequences: 53049
Number of extensions: 648400
Number of successful extensions: 1644
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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