Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20901
(622 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 42 5e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 42 1e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 41 2e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 40 2e-04
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 40 3e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 38 0.002
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 36 0.005
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.019
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 33 0.033
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 33 0.044
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 33 0.044
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 31 0.18
SPBC14C8.05c |meu17||glucan-alpha-1,4-glucosidase|Schizosaccharo... 26 3.8
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 5.1
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 6.7
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 6.7
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 8.8
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 8.8
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 25 8.8
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 25 8.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 42.3 bits (95), Expect = 5e-05
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 302 DGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRR 445
+GCK++F L++H H G C+ CG FGY++ + +H R
Sbjct: 241 EGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 35.1 bits (77), Expect = 0.008
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 54 DKCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTGEYQFMC-- 221
++CGK + H R H+N+ + C + C LK H R HT F C
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 222 TECPARF 242
C A+F
Sbjct: 88 DGCDAQF 94
Score = 33.5 bits (73), Expect = 0.025
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Frame = +3
Query: 144 CPYRG---RY--PELLKTHLRTHTGEYQFMC--TECPARFLFKS 254
CPY +Y P LL+ HLRTH+ E F+C T C F KS
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKS 68
Score = 31.1 bits (67), Expect = 0.13
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Frame = +3
Query: 51 CDKCGKSFRLRCAYHNHNRRHTNDFSY-KCQFCPYRG-----RYPELLKTHLRT-HTGEY 209
C CG+ F+ +H H K CP G LK H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 210 QFMCTECPARFLFK 251
F C C +F +K
Sbjct: 266 AFHCDSCGTKFGYK 279
Score = 29.5 bits (63), Expect = 0.41
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 230 SCSFFV*KYLNTHMFKH-KIPQFKC--DGCKRAFHSKLLLQRHYQADHVGIKNHVCNI-- 394
S +F+ +L H H + F C DGC F+++ L+RH + H K + C
Sbjct: 61 SKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEV-HRKPKPYACTWEG 119
Query: 395 CGKAFGYRNAMMKHQRRVH 451
C + F + H H
Sbjct: 120 CDECFSKHQQLRSHISACH 138
Score = 27.1 bits (57), Expect = 2.2
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 LNTHMFKHKIPQFKCDGCKRAFHSKLLLQRH---YQADHVGIKNHVCNI--CGKAFGYRN 421
L H+ + +P C C R F + L+ H +Q K + C + C K+F +
Sbjct: 194 LQNHIREAHVPS--CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSS 251
Query: 422 AMMKHQRRVHKREKMLH 472
A+ KH +H+ H
Sbjct: 252 ALKKHISVIHEGNMAFH 268
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 293 FKCDGCKRAFHSKLLLQRHYQ 355
F CD C F K +LQRH +
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLE 287
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 281 KIPQFKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNI-------CGKAFGYRNAMMKHQ 439
K+ Q+ C+ C RAF L+RH ++ H K C+ CG+ F R+ +++HQ
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Query: 440 RRVHK 454
+++H+
Sbjct: 125 QKIHR 129
Score = 32.7 bits (71), Expect = 0.044
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 129 YKCQFCPYRGRYPELLKTHLRTHTGEYQFMCTE 227
Y C+ C E LK H+R+HT E F C+E
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKC 137
K+YVC+ C ++F H R HTN+ + C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 KYVC--DKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLRTHTGEYQF 215
KYVC + C K + +H + H +D Y+C C LK HLR H +
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPY 501
Query: 216 MCTECPARF 242
+C EC RF
Sbjct: 502 VC-ECLKRF 509
Score = 31.9 bits (69), Expect = 0.077
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 KY-LNTHMFKHKIPQ-FKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNA 424
KY + +H+ H + ++CD CK F L+RH + H + +VC C K F +A
Sbjct: 457 KYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRI-HENGRPYVCE-CLKRFNRLDA 514
Query: 425 MMKHQRR 445
+ +H++R
Sbjct: 515 LNRHKQR 521
Score = 26.6 bits (56), Expect = 2.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 12 HMTMHDPDHKKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTH 185
H+ H D + Y CD C F H R H N Y C+ C R + L H
Sbjct: 463 HIQTHLSD-RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 293 FKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQR 442
F C C + F L+RH ++ H K VC ICGK F R+ + +H+R
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471
Score = 31.9 bits (69), Expect = 0.077
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 PDHKKYVCDKCGKSFRLRCAYHNHNRR-HTNDFSYKCQFCPYRGRYPELLKTHLRTH 197
P K +VC +C K F+ H R HT++ + C C R + L+ H R H
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 6 RDHMTMHDPDHKKYVCDKCGKSFRLRCAYHNHNRRHTN 119
R H+ K +VC CGK F R H R H N
Sbjct: 439 RRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVN 475
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 368 GIKNHVCNICGKAFGYRNAMMKHQRRVHKREK 463
G K+ VC C K F + +H R +H EK
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEK 450
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 45 YVCDKCGKSFRLRCAYH--NHNRRHTNDFSYKCQFCPYRGRYPELLKTHLRTHTGEYQFM 218
YVC G + R AY+ +H HTN ++C C + H + HTG F
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 219 CTECPARF 242
C C RF
Sbjct: 630 CVTCNQRF 637
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 257 LNTHMFKH-KIPQFKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMK 433
L +HM H F+C CK++F + +RH Q H GIK C C + F +A+ +
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTCNQRFARMDALNR 645
Query: 434 HQR 442
H +
Sbjct: 646 HYK 648
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 6 RDHMTMHDPDHKKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTH 185
+ HM H +++ + C C KSF + H + HT ++ C C R + L H
Sbjct: 588 KSHMNTHT-NYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Query: 186 LRTHTGE 206
++ G+
Sbjct: 647 YKSEVGQ 653
Score = 30.3 bits (65), Expect = 0.23
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SYKCQFCPYRGRYPEL--LKTHLRTHTGEYQFMCTECPARF 242
+Y C F R+ LK+H+ THT F C+ C F
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSF 609
Score = 28.7 bits (61), Expect = 0.72
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 305 GCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHKREKMLHGRMP 484
GC + F L+ H H + C+IC K+F ++ +H+ ++H K
Sbjct: 576 GCNKRFTRAYNLKSHMNT-HTNYRPFQCSICKKSFARQHDKRRHE-QLHTGIKAFACVTC 633
Query: 485 SYLMAVHDMLNR 520
+ A D LNR
Sbjct: 634 NQRFARMDALNR 645
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 290 QFKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYRNAMMKHQR 442
+++C C + F L+ H + H G + VC+ CGKAF R+ M +HQR
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYS-HTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
Score = 33.1 bits (72), Expect = 0.033
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 YRDHMTMHDPDHKKYVCDKCGKSFRLRCAYHNHNRRHTN-DFSYKCQFCPYRGRYPELLK 179
Y DH H+ D + +V + S ++ ++ + + + Y+C C P LK
Sbjct: 428 YSDH---HNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLK 484
Query: 180 THLRTHTGEYQFMC 221
H +HTGE F+C
Sbjct: 485 IHTYSHTGERPFVC 498
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +3
Query: 39 KKYVCDK--CGKSFRLRCAYHNHNRRH 113
+ +VCD CGK+F +R H R H
Sbjct: 494 RPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 FKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYRNAMMKHQRRVHKREKM 466
++C CKR FH + RH ++ H G K C+ C K F R+ +++H R H R+ +
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKRFTRRDELIRHV-RTHLRKAL 61
Query: 467 L 469
+
Sbjct: 62 V 62
Score = 34.7 bits (76), Expect = 0.011
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SYKCQFCPYRGRYPELLKTHLRTHTGEYQFMCT--ECPARF 242
SY+C FC E H+R+HTGE F C+ C RF
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRF 43
Score = 31.9 bits (69), Expect = 0.077
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTH 197
K Y C C + F + H R HT + ++C + C R + L H+RTH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 33.9 bits (74), Expect = 0.019
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +2
Query: 287 PQFKC--DGCKR---AFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYRNAMMKHQRR 445
P++ C D C R S+ L H ++ H G K +C++ C ++F +A+ KH R
Sbjct: 71 PKYTCEWDDCPRKGMVQTSRFALVAHLRS-HTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Query: 446 VHKREKM 466
VH+ + +
Sbjct: 130 VHEADTL 136
Score = 31.9 bits (69), Expect = 0.077
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +3
Query: 129 YKCQF--CPYRGRYPE---LLKTHLRTHTGEYQFMCT--ECPARF 242
Y C++ CP +G L HLR+HTGE F+C+ EC F
Sbjct: 73 YTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSF 117
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.1 bits (72), Expect = 0.033
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 DFSYKCQF--CPYRGRYPELLKTHLRTHTGEYQFMCTECPARF 242
D YKC F C E + H R+HT F+C C + F
Sbjct: 14 DIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSF 56
Score = 30.7 bits (66), Expect = 0.18
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 42 KYVCD--KCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHL 188
+Y CD C KSF + H R HTN ++ C C ++L H+
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 32.7 bits (71), Expect = 0.044
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 129 YKCQFCPYRGRYPELLKTHLRTHTGEYQFMCT--ECPARF 242
YKC C E H+RTHTGE +CT C RF
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRF 65
Score = 31.1 bits (67), Expect = 0.13
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 27 DPDHKK-YVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTH 197
+PD + Y C C K+F H R HT + + C F C R + L H R H
Sbjct: 19 NPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Query: 198 T 200
T
Sbjct: 79 T 79
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 32.7 bits (71), Expect = 0.044
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 33 DHKK-YVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLR 191
D K+ + CD+C K F H H+ C +C + + +LLK H++
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 30.7 bits (66), Expect = 0.18
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 SFFV*KYLNTHMFKHK-IPQFKCDGCKRAFHSKLLLQRHYQADHVGIKN 379
SF ++L H H+ + F C C RAF +L RH Q H+ +N
Sbjct: 36 SFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 30.3 bits (65), Expect = 0.23
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 60 CGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLR 191
C KSF + H R H N ++ C FC ++L H++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 25.8 bits (54), Expect = 5.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 102 NRRHT-NDFSYKCQF--CPYRGRYPELLKTHLRTHTGEYQFMCTECPARF 242
+R H D + C + CP E L+ H RTH F C+ C F
Sbjct: 16 SRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
>SPBC14C8.05c
|meu17||glucan-alpha-1,4-glucosidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 114 TNDFSYKCQFCPYRGRYPELLKTHLRTHTGEYQFMCTECPARFLFKS 254
T D+ + GRYPE + + G F+CT A ++K+
Sbjct: 306 TRDYPVNQGWKQAMGRYPEDVYDGVSKSIGNPWFICTSSAAEIIYKA 352
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = -1
Query: 523 NSVQHVMHSHQIRWHSSVKHFLSFMNTSLVFHHSVSVTKSLPT 395
++ H + + R+ +VKH L + S++ HH++ +S P+
Sbjct: 541 DTYNHSIDNSGSRFTEAVKHNLGNSSHSIMRHHTLGTLRSRPS 583
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 539 KKXQSKFCSACHAQPSNKMAFVREAFSL 456
+K QSK+ S C + P+ K+ ++FS+
Sbjct: 501 RKVQSKYPSMCGSSPAIKLILFSKSFSV 528
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.4 bits (53), Expect = 6.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -2
Query: 342 CNNNFEWKALLHPSH 298
C+++ WK +HP H
Sbjct: 1667 CHDSLSWKTFIHPDH 1681
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -1
Query: 442 SLVFHHSVSV-TKSLPTNVAYMIF 374
++ FH +SV T +LPTN+++ IF
Sbjct: 663 AISFHWFLSVYTDTLPTNISFRIF 686
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 58 NVENHSDYDVHITITIVDTQMTSHINVNFVLIGVDIQNYSK 180
N+E + + H I T +++H++ V + DI NY K
Sbjct: 989 NLEFEAIWKGHSENKIPYTSLSNHLSTEIVKLDHDIYNYEK 1029
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 304 VTFKLWYFMLKHVSIQ 257
VTF+ WY+++K S Q
Sbjct: 480 VTFRFWYYLMKAKSFQ 495
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 251 FKQKTSRTFSTHKLVFSSMC 192
F Q + TFS H + FS MC
Sbjct: 460 FSQTSLTTFSVHWIKFSQMC 479
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,616,072
Number of Sequences: 5004
Number of extensions: 56184
Number of successful extensions: 186
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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