Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20901
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 44 7e-05
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 43 2e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 42 4e-04
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 41 7e-04
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 39 0.003
06_03_0743 + 24069752-24070483,24071890-24072345 37 0.015
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 36 0.034
09_04_0564 + 18565583-18566449,18569662-18570123 35 0.060
08_02_1172 + 24898290-24899141,24900864-24901328 35 0.060
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 34 0.079
04_04_0157 + 23165638-23166633 33 0.14
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 33 0.18
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 32 0.32
09_02_0366 + 7941550-7942161,7942230-7942775 32 0.32
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 32 0.32
05_01_0111 - 752045-752641 32 0.42
05_05_0022 + 21592403-21593083,21593720-21594208 31 0.97
12_02_0916 - 24271151-24271894 30 1.3
03_06_0477 + 34210844-34211356 30 1.3
03_02_0567 - 9495290-9495796 30 1.3
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 30 1.7
05_04_0339 + 20397591-20397627,20398494-20398526,20399210-203994... 30 1.7
01_06_1614 - 38648495-38649706 29 2.3
01_06_1412 - 37140654-37141088,37141549-37142214 29 2.3
05_05_0115 - 22493350-22493874 29 3.9
02_05_1277 - 35408097-35409080 29 3.9
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 29 3.9
11_08_0067 - 28135216-28135728 28 5.2
09_02_0226 - 6007656-6008063,6012166-6012678 28 5.2
07_03_1165 - 24459156-24460139 28 5.2
07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392 28 5.2
03_06_0478 + 34214412-34214846 28 5.2
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 28 5.2
06_03_1478 - 30420097-30420651 28 6.9
03_05_0796 + 27787401-27788831 28 6.9
03_01_0549 - 4102098-4102198,4102394-4102544,4102629-4102760,410... 28 6.9
08_02_1602 - 28148255-28149413,28151927-28152087 27 9.1
07_01_0891 - 7447079-7447330,7447431-7447554,7449571-7449793,744... 27 9.1
06_01_0288 - 2106113-2109055 27 9.1
03_06_0465 - 34130083-34130340,34130421-34130541,34131158-341311... 27 9.1
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 27 9.1
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 27 9.1
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Frame = +2
Query: 254 YLNTHMFKHKIPQFKC--DGCKRAFHSKLLLQRHYQ---ADHVGIKNH---VCNI--CGK 403
+LN HM KH+ F C DGC R F K +QRH + D K++ VC C K
Sbjct: 104 HLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNK 163
Query: 404 AFGYRNAMMKHQ 439
F Y + M KH+
Sbjct: 164 VFKYASKMKKHE 175
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 KYLNTHMFKHKIPQFKC--DGCKRAFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYR 418
++L H + KC +GC+ +F +K L +H +A H +K C C K F Y+
Sbjct: 230 RHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYK 289
Query: 419 NAMMKHQR 442
+ H++
Sbjct: 290 HVRDNHEK 297
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 YHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLRTHTGEYQFMC--TECPARFLFK 251
Y ++ + ++ + CQ C + P LK H+++H+ E F+C +CP ++ K
Sbjct: 47 YKSNGEKVVHEGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRK 102
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +2
Query: 254 YLNTHMFKHKIPQ-FKC--DGCKRAFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYR 418
+L HM H + F C + C ++ K L RH H G K C++ CG+ F +
Sbjct: 74 HLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRH-MLKHQG-KLFTCSMDGCGRKFSIK 131
Query: 419 NAMMKHQRRVHKRE 460
M +H + +H+ E
Sbjct: 132 ANMQRHVKEIHEDE 145
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 KYLNTHMFKHKIPQFKCD-GCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAM 427
K+ +H+ + C+ GC + F + L+ H QA H ++ C+ICG+
Sbjct: 173 KHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQ---CDICGE-------- 221
Query: 428 MKHQRRVHKREKMLHGRMPS 487
KH ++ KR H +PS
Sbjct: 222 -KHLKKNIKRHLRAHEEVPS 240
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +3
Query: 36 HKKYVCDK--CGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTG 203
HK +C CGK F H + HT+D C + C ++P HLR HTG
Sbjct: 1106 HKSDICPVKGCGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTG 1165
Query: 204 EYQFMCTE--CPARFLFKS 254
+ ++C E C F F S
Sbjct: 1166 DRPYVCHEPGCAQTFRFVS 1184
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Frame = +2
Query: 176 QNTFKNTYWRIPIYVY*MSCSFFV*K--YLNTHMFKHKIPQFKC--DGCKRAFHSKLLLQ 343
Q +T ++ P + C F + +LN H+ H+ F C +GC R F K +Q
Sbjct: 275 QECLVHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQ 334
Query: 344 RHYQADH------VGIKNHVC--NICGKAFGYRNAMMKHQ 439
RH Q H K +C CGK F Y + + KH+
Sbjct: 335 RHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHE 374
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 308 CKRAFHSKLLLQRHYQADHVGIKNHVCNI--CGKAFGYRNAMMKHQR 442
CK +F K L +H +A H + VC CGK+F Y++ H++
Sbjct: 450 CKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYKHVRDNHEK 496
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 305 GCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQR 442
GC +AF + L+ H ++ H ++ VC++CG +N +HQR
Sbjct: 391 GCMKAFTNLECLKAHNKSCH---RHVVCDVCGTKQLKKN-FKRHQR 432
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +3
Query: 36 HKKYVC--DKCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTG 203
H++ +C + CGK F H H ++ +KC + CP ++ H+R HTG
Sbjct: 814 HQRNICTDESCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTG 873
Query: 204 EYQFMCT--ECPARFLFKS 254
E + C+ +C F + S
Sbjct: 874 ERPYKCSAPDCGQSFRYVS 892
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 36 HKKYVCD--KCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTG 203
HKK C CG+ FR H H +D YKC + C ++ H + H G
Sbjct: 560 HKKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAG 619
Query: 204 EYQFMCT 224
+ + CT
Sbjct: 620 KRPYKCT 626
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHK 454
LQ HY+ H GIK +C CGKAF R H++ K
Sbjct: 299 LQTHYKRKH-GIKPFMCRKCGKAFAVRGDWRTHEKNCGK 336
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLR 191
K ++C KCGK+F +R + H ++ Y C C ++ LK H+R
Sbjct: 310 KPFMCRKCGKAFAVRGDWRTH-EKNCGKLWY-CA-CGSDFKHKRSLKDHIR 357
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 36 HKKYVCDK--CGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTG 203
HK+ +C C K F H + H ++ KC + C ++P H+R HTG
Sbjct: 1250 HKRDICPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTG 1309
Query: 204 EYQFMCTE--CPARFLFKS 254
+ C E C F F S
Sbjct: 1310 VRPYECQEPGCGQTFRFVS 1328
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHK 454
LQ HY+ H G+K +C CGKAF + H++ K
Sbjct: 344 LQTHYKRKH-GLKPFLCRKCGKAFAVKGDWRTHEKNCGK 381
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLR 191
K ++C KCGK+F ++ + H ++ Y C C ++ LK H R
Sbjct: 355 KPFLCRKCGKAFAVKGDWRTH-EKNCGKLWY-C-LCGSEFKHKRSLKDHAR 402
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHK 454
LQ HY+ H G+K +C CGKAF + H++ K
Sbjct: 339 LQTHYKRKH-GLKPFLCRKCGKAFAVKGDWRTHEKNCGK 376
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLR 191
K ++C KCGK+F ++ + H ++ Y C C ++ LK H R
Sbjct: 350 KPFLCRKCGKAFAVKGDWRTH-EKNCGKLWY-C-LCGSEFKHKRSLKDHAR 397
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 34.3 bits (75), Expect = 0.079
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +3
Query: 6 RDHMTMHDPDHKKYVCDK--CGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPEL-- 173
R H +H+ ++Y+C + CGK F H+ HT + C P G+ L
Sbjct: 105 RKHAHVHN--ERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPH-PGCGKAFSLDF 161
Query: 174 -LKTHLRTHTGEYQFMC--TECPARF 242
L++HL+TH E +C C RF
Sbjct: 162 NLRSHLKTHALENYHVCPFPACGKRF 187
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 DKCGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTGEYQFMC 221
+ CGK+F A H H N+ Y CQ C + LK H HTG+ F+C
Sbjct: 92 ENCGKTFVDVAALRKHAHVH-NERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFIC 148
Score = 30.7 bits (66), Expect = 0.97
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 12 HMTMHDPDHKKYVCDK--CGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLK 179
H +H K ++C CGK+F L +H + H + + C F C R LK
Sbjct: 136 HHLIHT-GQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLK 194
Query: 180 THLRTH 197
+H++ H
Sbjct: 195 SHVKGH 200
>04_04_0157 + 23165638-23166633
Length = 331
Score = 33.5 bits (73), Expect = 0.14
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 380 HVCNICGKAFGYRNAMMKHQRRVHKRE 460
H+C +CG+ F R+ +++H +H RE
Sbjct: 104 HLCRVCGRRFRARDTLLRHFDAIHARE 130
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 377 NHVCNICGKAFGYRNAMMKHQRR--VHK--REKMLHGRMPSYLMAVHDMLNRILIXIFFN 544
+H CN CGK+FG A+ H RR V K R++ + S LM V + R L I F+
Sbjct: 382 SHRCNTCGKSFGSGQALGGHMRRHYVRKCNRQRGVADHAGSVLMKVQKLKLR-LDPILFD 440
Query: 545 V 547
V
Sbjct: 441 V 441
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 21 MHDPDHKKYVCDKCGKSFRLRCAYHNHNRRH 113
M D H+ C+ CGKSF A H RRH
Sbjct: 378 MKDNSHR---CNTCGKSFGSGQALGGHMRRH 405
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 275 KHKIPQFKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHK 454
K ++ + C C R F + +L +H +A H C++C K M H +VHK
Sbjct: 5 KKRVEKVFCYYCDREFDDEKILVQHQKAKHFK-----CHVCHKKLSTAGGMAIHVLQVHK 59
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHK 454
LQ HY+ H G + + C CGK F R H++ K
Sbjct: 266 LQTHYRRKH-GARPYACRRCGKRFAVRGDWRTHEKNCGK 303
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 60 CGKSFRLRCAYHNHNRRHTNDFSYKCQF--CPYRGRYPELLKTHLRTHTGEYQFMC 221
CGK+F A H H + Y C + C + LK H HTGE F+C
Sbjct: 50 CGKTFVDAGALRKHAHVH-GERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVC 104
>05_01_0111 - 752045-752641
Length = 198
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 287 PQFKCDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRR 445
P F+ G RA H K L K H C+ICG F A+ H RR
Sbjct: 61 PSFQALGGHRASHKKPRLDGDGDLSLSKPKLHGCSICGLEFAIGQALGGHMRR 113
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHKR 457
LQ HY+ H G K C C K F + H++ KR
Sbjct: 285 LQTHYKRKH-GAKPFACRRCAKPFAVKGDWRTHEKNCGKR 323
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 365 VGIKNHVCNICGKAFG-YRNAMMK---HQRRVHKREKMLHGRMPSYLMAV 502
+G VC++C KAF Y N M H R K + L G + +A+
Sbjct: 206 IGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAM 255
>12_02_0916 - 24271151-24271894
Length = 247
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 368 GIKNHVCNICGKAFGYRNAMMKHQR 442
G + H CN+CGKAF A+ H+R
Sbjct: 151 GGRAHECNVCGKAFPTGQALGGHKR 175
>03_06_0477 + 34210844-34211356
Length = 170
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHKREKMLHG 475
++ H AD H C+ICG F A+ H RR H+ E G
Sbjct: 95 IRLHRAADKEHRDKHECHICGLGFEMGQALGGHMRR-HREEMAAAG 139
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 27 DPDHK-KYVCDKCGKSFRLRCAYHNHNRRHTNDFS 128
D +H+ K+ C CG F + A H RRH + +
Sbjct: 102 DKEHRDKHECHICGLGFEMGQALGGHMRRHREEMA 136
>03_02_0567 - 9495290-9495796
Length = 168
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 281 KIPQFKCDGCKRAFHSKLLLQRHYQADHVGIKN--HVCNICGKAFGYRNAMMKHQRR 445
+ P F+ G RA H K L A K H C+ICG F A+ H RR
Sbjct: 36 QFPSFQALGGHRASHKKPRLADGDPAAEAPAKPKVHGCSICGLEFAVGQALGGHMRR 92
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 HMFKHKIPQFKCDGCKRAFHSKLLLQRHYQADHVG-IKNHVCNIC 397
H I +++C CK+AF ++ L +H+ H + N + + C
Sbjct: 951 HKIHFDINEWRCGFCKKAFRAEKFLDQHFHNRHNNLVDNSLADSC 995
>05_04_0339 +
20397591-20397627,20398494-20398526,20399210-20399438,
20402055-20402184,20402251-20402532
Length = 236
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 299 CDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICG 400
CD C+R +H K + +A+H IK++ C CG
Sbjct: 199 CDSCERWYHGKCVKITPARAEH--IKHYKCPDCG 230
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 386 CNICGKAFGYRNAMMKHQRRVHKREK 463
C++C K FG R A+ H RVH+ +K
Sbjct: 107 CHVCSKEFGSRKAVHGHM-RVHQADK 131
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHKR 457
LQ HY+ H G K C C K F + H++ KR
Sbjct: 277 LQTHYKRKH-GAKPFRCRRCAKPFAVKGDWRTHEKNCGKR 315
>05_05_0115 - 22493350-22493874
Length = 174
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 36 HKKYVCDKCGKSFRLRCAYHNHNRRHTND 122
H+ ++C CG FR+ A H RRH +
Sbjct: 87 HQWHLCAVCGVEFRMGQALGGHMRRHRGE 115
>02_05_1277 - 35408097-35409080
Length = 327
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 371 IKNHVCNICGKAFGYRNAMMKHQRR 445
++ H C+ICG FG A+ H RR
Sbjct: 212 LRVHECSICGAEFGSGQALGGHMRR 236
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQR 442
LQ HY+ H G ++ C C K F R H++
Sbjct: 235 LQTHYRRRH-GARDFACRRCAKRFAVRGDWRTHEK 268
>11_08_0067 - 28135216-28135728
Length = 170
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +2
Query: 257 LNTHMFKHKIPQFKCDGCKRAFHSKLLLQRHYQADHVGIKN---HVCNICGKAFGYRNAM 427
L H HK P+ + DG LL R + G H C++CGK F A+
Sbjct: 60 LGGHRTSHKRPRVRADGL-----DLLLGARPGKLGAGGASTPVVHRCDMCGKVFATGQAL 114
Query: 428 MKHQRR 445
H RR
Sbjct: 115 GGHMRR 120
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 338 LQRHYQADHVGIKNHVCNICGKAFGYRNAMMKHQRRVHKR 457
LQ HY+ H K C CGK R H++ +R
Sbjct: 226 LQTHYKRKHCA-KPFACRKCGKPLAVRGDWRTHEKNCGRR 264
>07_03_1165 - 24459156-24460139
Length = 327
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 386 CNICGKAFGYRNAMMKHQRRVH-KREKMLHGRMPSYLMAVH 505
C++C K FG R A+ H R H + EK P VH
Sbjct: 115 CHLCNKEFGSRKAVHGHMRVHHAENEKEPMSLPPQVAAPVH 155
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 380 HVCNICGKAFGYRNAMMKHQRRVHKRE 460
H CN+CGK + A+ H+R+ ++++
Sbjct: 218 HPCNVCGKEYPTGVALGGHKRKHYRKD 244
>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 260 NTHMFKHKIPQFKCDGCKRAFHSKLLLQRHYQADHVG 370
N+ + ++ C C +AF +LL H + DH G
Sbjct: 273 NSQSSRSRVTVDVCPKCSKAFRDPVLLVEHVERDHGG 309
>03_06_0478 + 34214412-34214846
Length = 144
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 380 HVCNICGKAFGYRNAMMKHQRRVHKRE 460
H C+ICG+ F A+ H RR H+ E
Sbjct: 100 HECHICGQGFEMGQALGGHMRR-HREE 125
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 42 KYVCDKCGKSFRLRCAYHNHNRRH 113
+YVC+ CG+ F+ H RRH
Sbjct: 30 RYVCEICGQGFQREQNLQMHRRRH 53
>06_03_1478 - 30420097-30420651
Length = 184
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 27 DPDHKKYVCDKCGKSFRLRCAYHNHNRRHT 116
D +YVCD+C F R A H H+
Sbjct: 102 DGKRYRYVCDRCKAPFETRQALGGHRASHS 131
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/76 (26%), Positives = 27/76 (35%)
Frame = +3
Query: 15 MTMHDPDHKKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLRT 194
M D +Y C C + F A H H R H ++ P R P L
Sbjct: 46 MAAADERAGRYPCPLCDRHFPTEKAVHGHMRSHPGR-GWRGMEPP---REPSPGDLALAA 101
Query: 195 HTGEYQFMCTECPARF 242
Y+++C C A F
Sbjct: 102 DGKRYRYVCDRCKAPF 117
>03_05_0796 + 27787401-27788831
Length = 476
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 374 KNHVCNICGKAFGYRNAMMKHQRRVHKREK 463
K VC+ICG+ FG A+ H K+ K
Sbjct: 245 KRFVCSICGRCFGSHQALGGHVLGHKKKAK 274
>03_01_0549 -
4102098-4102198,4102394-4102544,4102629-4102760,
4102988-4103162,4103494-4103945,4104042-4104121,
4104342-4104408,4104709-4104814,4104924-4105033,
4105133-4105201,4105661-4105771,4106263-4106427,
4106639-4106725,4106974-4107027,4107101-4107240,
4107820-4107897,4108066-4108720
Length = 910
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 316 SLAPVTFKLWYFMLKHVSIQVLLN 245
+L+ TF WY++ H+ +VLLN
Sbjct: 481 TLSAATFSFWYYIGTHIFPEVLLN 504
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +3
Query: 39 KKYVCDKCG-KSFRLRCAYHNHNRRHTNDFSYKCQFCPYRGRYPELLKTHLRTHTGEYQF 215
K YVC++CG K F + H +H D + C C + L H+ G
Sbjct: 348 KMYVCNRCGRKHFSVLSDLRTH-EKHCGDHRWLCS-CGTSFSRKDKLIGHVSLFAGHQPV 405
Query: 216 MCTECP 233
M + P
Sbjct: 406 MPLDAP 411
>07_01_0891 -
7447079-7447330,7447431-7447554,7449571-7449793,
7449891-7449923,7450042-7450144
Length = 244
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 299 CDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKA 406
CD C+R FH K + +A+H IK++ C C +
Sbjct: 206 CDICERWFHGKCVRITPAKAEH--IKHYKCPDCSSS 239
>06_01_0288 - 2106113-2109055
Length = 980
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3
Query: 48 VCDKCGKSFRLRCAYHNHNRRHTNDFSYKCQFCPYRG 158
+C CG S C+ H R+H N C G
Sbjct: 867 LCGNCGASLSRICSQHTTTRKHQNMIDRGTYLCTLLG 903
>03_06_0465 -
34130083-34130340,34130421-34130541,34131158-34131186,
34132259-34132382,34132594-34132816,34132948-34132980,
34133106-34133208
Length = 296
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 299 CDGCKRAFHSKLLLQRHYQADHVGIKNHVCNICGKA 406
CD C+R FH K + +A+H IK++ C C +
Sbjct: 256 CDICERWFHGKCVRITPAKAEH--IKHYKCPDCSSS 289
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 39 KKYVCDKCGKSFRLRCAYHNHNRRHTNDFSYKC 137
KK+ CD+CGK + + + H+ + YKC
Sbjct: 162 KKWKCDRCGKRYAVHSDWKAHS-KVCGTREYKC 193
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 314 RAFHSKLLLQRHYQADHVGIKNHVCNICGKAFGYRNAMMK-HQRRVHKR 457
+ H K+ ++ H++ + VC ICGK G ++ +K H ++ H++
Sbjct: 764 KKLHGKISMEWHHRRPAM----KVCPICGKNAGLSSSSLKLHLQKAHRK 808
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,338,487
Number of Sequences: 37544
Number of extensions: 307250
Number of successful extensions: 999
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -