Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20900
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 2e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 159 3e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 99 3e-21
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 83 3e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 62 4e-10
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 45 5e-05
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 31 0.86
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_30631| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 30 1.5
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.0
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.6
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.6
SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7) 29 3.5
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 29 3.5
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 3.5
SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52) 29 3.5
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 29 4.6
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.1
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.1
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 8.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (394), Expect = 2e-40
Identities = 73/87 (83%), Positives = 84/87 (96%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 434
LI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+
Sbjct: 196 LIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITP 255
Query: 435 NKRALRRLRTACERAKRTLXSSTQAAL 515
NKRA+RRLRTACERAKRTL SSTQA++
Sbjct: 256 NKRAMRRLRTACERAKRTLSSSTQASI 282
Score = 149 bits (360), Expect = 3e-36
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 183
K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLR
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLR 171
Query: 184 IINEPTAAAIAYGLDKKGTGERNVL 258
IINEPTAAAIAYGLDKK ERNVL
Sbjct: 172 IINEPTAAAIAYGLDKKVGVERNVL 196
Score = 94.3 bits (224), Expect = 8e-20
Identities = 46/61 (75%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
Frame = +2
Query: 506 SSIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVLV 679
+SIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVLV
Sbjct: 280 ASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLV 339
Query: 680 G 682
G
Sbjct: 340 G 340
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 159 bits (385), Expect = 3e-39
Identities = 74/88 (84%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 431
LIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++
Sbjct: 196 LIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMS 255
Query: 432 TNKRALRRLRTACERAKRTLXSSTQAAL 515
N RA+RRLRTACERAKRTL SST+A++
Sbjct: 256 KNSRAMRRLRTACERAKRTLSSSTEASI 283
Score = 144 bits (349), Expect = 6e-35
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 183
KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLR 171
Query: 184 IINEPTAAAIAYGLDKKGTGERNVL 258
+INEPTAAA+AYGLDK +GE+NVL
Sbjct: 172 VINEPTAAALAYGLDKSLSGEKNVL 196
Score = 87.4 bits (207), Expect = 9e-18
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +2
Query: 506 SSIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 682
+SIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVG
Sbjct: 281 ASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVG 339
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 156 bits (378), Expect = 2e-38
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 434
LIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+
Sbjct: 289 LIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITP 348
Query: 435 NKRALRRLRTACERAKRTLXSSTQAAL 515
NKRALRRLRTACERAKRTL SSTQA++
Sbjct: 349 NKRALRRLRTACERAKRTLSSSTQASI 375
Score = 134 bits (324), Expect = 6e-32
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = +1
Query: 22 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 201
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 202 AAAIAYGLDKKGTGERNVL 258
AAAIAYGLDKK ERNVL
Sbjct: 271 AAAIAYGLDKKVGQERNVL 289
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 156
KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/60 (66%), Positives = 55/60 (91%), Gaps = 1/60 (1%)
Frame = +2
Query: 506 SSIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVG 682
+SIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+VG
Sbjct: 373 ASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVG 432
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 139 bits (336), Expect = 2e-33
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 183
KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+R
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMR 869
Query: 184 IINEPTAAAIAYGLDKKGTGERNVL 258
IINEPTAAAIAYG+DKK GE+N+L
Sbjct: 870 IINEPTAAAIAYGMDKK-EGEKNIL 893
Score = 108 bits (260), Expect = 4e-24
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 434
L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++
Sbjct: 893 LVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRK 952
Query: 435 NKRALRRLRTACERAKRTLXSSTQA 509
+ RA+++LR E+AKR L + QA
Sbjct: 953 DNRAVQKLRREVEKAKRALSTQHQA 977
Score = 84.2 bits (199), Expect = 9e-17
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +2
Query: 473 EGKEDLXIVHTSSIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 652
+ K L H + +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K
Sbjct: 966 KAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKK 1025
Query: 653 AQIHDIVLVG 682
++IH+IVLVG
Sbjct: 1026 SEIHEIVLVG 1035
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 103 bits (247), Expect = 1e-22
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +3
Query: 258 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 437
++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ +
Sbjct: 4 VYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKD 63
Query: 438 KRALRRLRTACERAKRTLXSSTQ 506
AL+RLR A E+AK L SS Q
Sbjct: 64 SMALQRLREAAEKAKIELSSSVQ 86
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +2
Query: 557 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 682
++R++FE L ADL T+ P +K L+DA+++K +I D++LVG
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVG 149
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 99.1 bits (236), Expect = 3e-21
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 26/109 (23%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN--- 174
++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLS 70
Query: 175 ---------------------VLRIINEPTAAAIAYGLDKK--GTGERN 252
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 71 RTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +1
Query: 16 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 195
PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INE
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINE 205
Query: 196 PTAAAIAYGLDKKGTGERNVL 258
PTAAA+AYGL KK G NV+
Sbjct: 206 PTAAALAYGLHKK-EGVANVM 225
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/91 (35%), Positives = 55/91 (60%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 434
++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T
Sbjct: 225 MVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-T 283
Query: 435 NKRALRRLRTACERAKRTLXSSTQAALR*IL 527
++RLR E AK L + + ++ +L
Sbjct: 284 CSEDIQRLRQEVEAAKINLTRTNEVTIKLML 314
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +2
Query: 503 TSSIEIDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 673
T + + SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++V
Sbjct: 309 TIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVV 368
Query: 674 LVG 682
LVG
Sbjct: 369 LVG 371
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 4 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 183
+ F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR
Sbjct: 169 EVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLR 228
Query: 184 IINEPTAAAIAYGLDKK 234
++N+ TA ++AYG+ K+
Sbjct: 229 LMNDTTAVSLAYGIYKQ 245
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +3
Query: 264 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 443
D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+ ++ +
Sbjct: 259 DIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIK 318
Query: 444 ALRRLRTACERAKRTLXSST 503
A +L CE+ K+ + ++T
Sbjct: 319 AKIKLGAECEKLKKLMSANT 338
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 512 IEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 673
I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++V
Sbjct: 343 INIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +1
Query: 1 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 180
D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A A + GLNVL
Sbjct: 77 DVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVL 136
Query: 181 RIINEPTAAAIAYGL 225
+I+N TA A+ YGL
Sbjct: 137 QIMNSNTAVALNYGL 151
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 515 EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 682
+I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VLVG
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVG 322
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 324 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLXS 497
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ L +
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 498 STQ 506
+ +
Sbjct: 261 NNE 263
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYK 419
L++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+K
Sbjct: 157 LVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWK 216
Query: 420 KDLATNKRALRRLRTACERAKRTLXSSTQA 509
D TNKR+ +L+T+ E+ K L + A
Sbjct: 217 IDPLTNKRSKTKLQTSAEQCKNILSTLESA 246
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +2
Query: 557 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 682
++R++FE L ADL T+ P +K L+DA+++K +I D++LVG
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVG 94
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 246 TKCLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 368
T LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1427 TDTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 264 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 368
D G GT VS + +E+G +++ D H+ G F
Sbjct: 1526 DNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -1
Query: 373 LSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIRHFVLQYPFCQ 224
LS S+PP +P F S S+ MD +PPPR+ RHF +P Q
Sbjct: 398 LSFSTPPPRRNPFAPFPS-YSQSLPEMDY--MPPPRNHERHFSDPFPVSQ 444
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 389 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 481
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_30631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 334 VDFTSKIPSSMVRMDTSKVPPPRSKIRHFVLQYPFCQDR 218
V TS++ V T VP P S++R ++ + C DR
Sbjct: 28 VQATSEVTVVSVETQTDAVPKPNSELRQAIIAWATCDDR 66
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 389 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK--EDLXIVHTSSIEIDSLFE 535
LCP ++ GP +++E S AFA C+ GK E + T+ + LFE
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGKILERFDKLATTECTKEDLFE 256
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 258 IFDLGGGTFDVSILTIEDGIFEVK 329
I+DLG GT++++IL E G++ ++
Sbjct: 321 IYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 380 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 469
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 258 IFDLGGGTFDVSILTIEDGIFEV 326
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 262 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 405
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +1
Query: 223 LDKKGTGERNVLSLTSAAVPSTCPSLPSRMVSSR*NPPPATPTW-EVRTLTIAWSTTLSR 399
L KK + ++L + V S L + SS + PP TPT T++ STT S
Sbjct: 10 LVKKDSKGGDMLCMAMPPVSSQDELLLTSAASSPSHTPPGTPTTPTTSTVSFLPSTTPSS 69
Query: 400 SSRGNT-------KRTSLPTRELLGVCVLHVR 474
SS+G + KR S T ++ V L ++
Sbjct: 70 SSQGTSSTSKSKKKRKSKKTTPIIAVIALFIQ 101
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 331 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 447
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7)
Length = 1384
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 19 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY--FNDSQRQATKDAGTISGLNVLRIIN 192
EE + + E AY + N + P + + QA +DA + G + L ++
Sbjct: 1206 EEEGEQPVDNIPEGVGAYGAASSINTNLHTPIQGTTGEEKEQAERDADSTGGTSFLAEVD 1265
Query: 193 EPTAAAIAYGLD--KKGTGERN-VLSL-TSAAVPSTCPS 297
+ D +K T + N +LS+ TSAA+P+T PS
Sbjct: 1266 SFVSCEHCESTDLIEKDTADANSLLSIVTSAAMPATFPS 1304
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 19 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY--FNDSQRQATKDAGTISGLNVLRIIN 192
EE + + E AY + N + P + + QA +DA + G + L ++
Sbjct: 327 EEEGEQPVDNIPEGVGAYGAASSINTNLHTPIQGTTGEEKEQAERDADSTGGTSFLAEVD 386
Query: 193 EPTAAAIAYGLD--KKGTGERN-VLSL-TSAAVPSTCPS 297
+ D +K T + N +LS+ TSAA+P+T PS
Sbjct: 387 SFVSCEHCESTDLIEKDTADANSLLSIVTSAAMPATFPS 425
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 37 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 186
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 187 INEPTAAAIAYGLDKKGTG 243
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52)
Length = 460
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 433 PTRELLGVCVL--HVRGQRGPXHRPHKQH*DRFSL*GY*LLHVNYSCSLRG 579
P+R+ G + H RGQ GP +P +Q +R + G LH Y + +G
Sbjct: 362 PSRKFEGESTMQSHFRGQYGPRSKPVRQEMNRPATSGPMDLHTTYDDTFKG 412
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 265 TSAAVPSTCPSLPSRMVSSR*NPPPATP 348
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 497 VHTSSIEIDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 637
++T +DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 161 LNTLLAALDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 389 LCPGVQEEIQKGPRYQQESS*AFAYCM 469
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 389 LCPGVQEEIQKGPRYQQESS*AFAYCM 469
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 283 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 447
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,453,660
Number of Sequences: 59808
Number of extensions: 489279
Number of successful extensions: 4249
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4243
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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