Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20899
(437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 128 3e-30
07_01_0578 + 4295386-4296489,4297394-4297507 125 2e-29
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.025
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 32 0.18
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 32 0.23
04_01_0208 + 2596110-2596928 32 0.23
05_03_0163 + 9070781-9071320 31 0.31
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 31 0.40
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 31 0.40
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 0.71
02_02_0147 - 7176478-7176832,7177006-7177334 30 0.71
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 30 0.93
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 0.93
12_02_0634 + 21416205-21416954 29 1.6
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 29 2.2
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 28 2.9
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 2.9
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 3.8
10_05_0107 - 9223680-9223980,9224340-9224715,9225722-9225817,922... 28 3.8
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 3.8
05_04_0292 + 19893895-19894983 28 3.8
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 3.8
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 27 5.0
05_05_0142 - 22673607-22674134 27 5.0
04_01_0588 + 7657510-7657992,7658397-7658843 27 5.0
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 27 5.0
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 27 5.0
09_06_0153 - 21243108-21245660 27 6.6
09_03_0100 + 12363061-12363333 27 6.6
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 27 6.6
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 27 8.7
10_07_0029 + 12031711-12032464,12044289-12044386 27 8.7
09_04_0541 + 18437075-18440062 27 8.7
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 27 8.7
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 8.7
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 8.7
03_01_0147 - 1170481-1171260,1171332-1171511 27 8.7
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 128 bits (308), Expect = 3e-30
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHRRVN+R R
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLR 123
Query: 435 R 437
R
Sbjct: 124 R 124
Score = 58.0 bits (134), Expect = 3e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 253 HK 258
H+
Sbjct: 63 HQ 64
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 125 bits (301), Expect = 2e-29
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WHRRVN+ R
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLR 124
Query: 435 R 437
R
Sbjct: 125 R 125
Score = 56.0 bits (129), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +1
Query: 85 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.025
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 172 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHKPVLNHGVLD 285
RP + DV S S +S P SK++GH VL HG +D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 31.9 bits (69), Expect = 0.23
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 203
ASL N + P+F V L G SQA V + GAH G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>04_01_0208 + 2596110-2596928
Length = 272
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRW 407
R +GG + E GR GGG + A G R +P WRRW
Sbjct: 118 RGRGGGCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRW 177
Query: 408 HRRVNLRQR 434
RR R+R
Sbjct: 178 RRRWRRRRR 186
>05_03_0163 + 9070781-9071320
Length = 179
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 344
R GGWSQ AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 31.1 bits (67), Expect = 0.40
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 203
ASL N I +PTF +G L + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAV 293
EAALLR G W++ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 0.71
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 374
+++ A ++GG S S S G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 375 MFAPTKP-WR 401
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>02_02_0147 - 7176478-7176832,7177006-7177334
Length = 227
Score = 30.3 bits (65), Expect = 0.71
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAV-ARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
R+ GGWS +A + G G V +R P + G G G R + P + RR
Sbjct: 88 RQHGGWSTETAAAGGCGNGVHSRRPHLAGVVAIGGVGGQLGAERRSRWQWRPVRRKRRGR 147
Query: 411 RR 416
RR
Sbjct: 148 RR 149
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 29.9 bits (64), Expect = 0.93
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 126 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIP 305
+G ++A + + P GP ++ +++L A RE + +A + T +A +
Sbjct: 448 SGYTRAATLNLPSVIPIGPRN--TQENIKQLLAGGQRELVATGEAAATAAATAKATPPLA 505
Query: 306 R-VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 404
R GG HR G+G G GG WRR
Sbjct: 506 RRTADGGAHR-GRGGGGAEADGGARRGRGGGWRR 538
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
HH + H + YE+ + H + RQ QY QH
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>12_02_0634 + 21416205-21416954
Length = 249
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKP-WRRW 407
R +GG G GGG + G RG KP WRRW
Sbjct: 152 RGRGGSCDAGRGGGAAGGCTGEAGGAAGGGRLGEKRRATAGRQLRGSPRETEGKPGWRRW 211
Query: 408 HRRVNLRQR 434
RR R+R
Sbjct: 212 RRRWRRRRR 220
Score = 27.1 bits (57), Expect = 6.6
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Frame = +3
Query: 171 PSGPGQ*CSRFYVQELEAALLREQGGWSQT----SAESWGTGRAVARIP----RVRGGGT 326
P P + +R V+ A + R G + A SW GR R P R RGG
Sbjct: 66 PGQPEEMSTRRKVRPARATVFRRCSGEEEVIPGMRAASWSRGRWWRRRPALRGRGRGGRR 125
Query: 327 HRSGQGAFGNMCRGGRMFAPTKPWRRWHR 413
RSG A G R GR+ RR R
Sbjct: 126 RRSGGDATGR--RRGRVSGAFPAKRRADR 152
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 203
ASL N I +PT +G L + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 203
ASL+ N ++ +PT V L ++ G S V + GAH G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 219 EAALLREQGG-WSQTSAE-SWGTGRAVARIPRVRGGGTHRSG 338
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>10_05_0107 -
9223680-9223980,9224340-9224715,9225722-9225817,
9225870-9225930
Length = 277
Score = 27.9 bits (59), Expect = 3.8
Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARI-PRVRGGGTH-RSGQGAF----GNMCRGGRMFAPTKPW 398
E G W S S TGR AR P + GGG H R GQ G+ PW
Sbjct: 84 ELGRWCTASVSS-STGRGGARRGPALEGGGGHQRQGQQVLVSGKGSFPWASASSPARSPW 142
Query: 399 RRWHRRVNLRQRR 437
R + R RR
Sbjct: 143 WRRQQSSPARSRR 155
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 390 SWGRTYVHHDTCYRRHPDRTYEYHH 316
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>05_04_0292 + 19893895-19894983
Length = 362
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 181 GPDGWAP*TRTGGAWLHPAPSHSSLSTPTLK 89
G D WAP GG LHP H++ S L+
Sbjct: 211 GADSWAPLRVAGGIPLHPGFVHATRSKSELE 241
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 333 TYEYHH-HGHAEFGRQHVQYPMIQH 262
T+++HH HGH FGR H +P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHH 166
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 276 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 437
G G A + RV GGG+ G+GA + G + W R +RR
Sbjct: 84 GAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGGFGRRR 137
>05_05_0142 - 22673607-22674134
Length = 175
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 249 WSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 416
W TS SW G A AR+ + GG R +G RG + + RRW R
Sbjct: 68 WIPTS--SWEVGDA-ARMTALMVGGAGRRREGRGRGRWRGRAAYTRGRRGRRWRGR 120
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +3
Query: 222 AALLREQGGWSQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTK 392
+ +L W ++S+ W G R+ + GGG R G P
Sbjct: 214 SGVLPSSSEW-RSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGLGWASSWFGRPNL 272
Query: 393 PWRRW 407
PWRRW
Sbjct: 273 PWRRW 277
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 342 PDRTYEYHHHGHAEFGRQHVQYPMIQH 262
P + +HHHGH G H Q QH
Sbjct: 33 PQEHHHHHHHGH--HGHHHEQQQQQQH 57
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGT--HRSGQGAF 350
R + GW A+ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 134 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 12
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>09_03_0100 + 12363061-12363333
Length = 90
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 330 YEYHHHGHAEFGRQHVQYPMIQHWFVTSLLAHAVGLPRVLGHRNVNIIDQVRTDGRLEHE 151
YE+ HH H G + P + V + L AV + V R ++R GR
Sbjct: 6 YEHWHHHHQSVGVDEEEAPPVHLLAVDAFLEEAVPVDMVAAARREEEA-RLRRGGRPRSR 64
Query: 150 REGL 139
+G+
Sbjct: 65 EDGM 68
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 384 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVTS 247
GR VHH ++ + T++ H G+ F + + + H F T+
Sbjct: 213 GRVGVHHIDDSQQSKNFTFKCHREGNDIFSVNSLNFHPVHHTFATA 258
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 315 GGGTHRSGQGAFGNMCRGGRMFAPTKP 395
GGG +G GA RGG AP +P
Sbjct: 49 GGGGGGAGAGAARRRARGGARAAPARP 75
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 375 YVHHDTCYRRHPDR 334
Y+ HDT YR HP R
Sbjct: 94 YIFHDTAYRYHPRR 107
>09_04_0541 + 18437075-18440062
Length = 995
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 151 TGGAWLHPAPSHSS-LSTPTLKVGLPIDSFRYFSEAI 44
T G+WL PAP S+ L+T K+ +S + + E++
Sbjct: 714 TAGSWLAPAPMSSTLLATMASKLPTKANSIQLWGESL 750
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 356
GG+ +G GR RGGG R G+G G+
Sbjct: 169 GGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGS 206
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGH 307
HH + HP ++HHH H
Sbjct: 62 HHHHHHHHHPPPRVQHHHHHH 82
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -3
Query: 384 GRTYVHHDTCYRRHPDRTYEYHHH---GHAEFGRQH 286
GR + HH RH ++HHH GH + R H
Sbjct: 533 GRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHH 568
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 GIASLK*R-NESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 203
G ASL+ ++I +PTF++ L + G +Q V + GAH G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,652,966
Number of Sequences: 37544
Number of extensions: 288224
Number of successful extensions: 1163
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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