Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20899
(437 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 132 7e-31
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 132 7e-31
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 132 7e-31
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 132 7e-31
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 130 3e-30
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 33 0.57
BC107477-1|AAI07478.1| 249|Homo sapiens BEAN protein protein. 29 7.0
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 29 9.3
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 29 9.3
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 9.3
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 9.3
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 29 9.3
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 134
Query: 435 R 437
R
Sbjct: 135 R 135
Score = 81.0 bits (191), Expect = 2e-15
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +1
Query: 70 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 249
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 250 GHK 258
GH+
Sbjct: 73 GHQ 75
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 132 bits (318), Expect = 7e-31
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 80.6 bits (190), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 130 bits (313), Expect = 3e-30
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 434
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Q+
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 R 437
R
Sbjct: 121 R 121
Score = 82.6 bits (195), Expect = 5e-16
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 32.7 bits (71), Expect = 0.57
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 407
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>BC107477-1|AAI07478.1| 249|Homo sapiens BEAN protein protein.
Length = 249
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 351 RRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVT 250
+RH R + +HHH H R+H +Y +H +V+
Sbjct: 58 QRHRHRHHRHHHHHHHHRRRRHREY---EHGYVS 88
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 395
E GG ++ E W G + P ++ G ++G G C AP++P
Sbjct: 5 EDGGTTE-ELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 395
E GG ++ E W G + P ++ G ++G G C AP++P
Sbjct: 5 EDGGTTE-ELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 395
E GG ++ E W G + P ++ G ++G G C AP++P
Sbjct: 5 EDGGTTE-ELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 395
E GG ++ E W G + P ++ G ++G G C AP++P
Sbjct: 5 EDGGTTE-ELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 237 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 395
E GG ++ E W G + P ++ G ++G G C AP++P
Sbjct: 5 EDGGTTE-ELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,262,997
Number of Sequences: 237096
Number of extensions: 1389843
Number of successful extensions: 4065
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3945
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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