Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20898
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    27   0.40 
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    25   1.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.7  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 23/80 (28%), Positives = 34/80 (42%)
 Frame = -2

Query: 305 RCSCSKTFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDS 126
           +C   +   CT +L    R  +  SPAS  G +PS P  H  P P   +  +    +   
Sbjct: 405 QCPIHRIQHCTCMLQNNARESI--SPASGTGMSPSYP--HSEPSPDYAM--LIGSRVIQR 458

Query: 125 TIQHAPPVGPLLGVG*ASPP 66
           T   +PP+ P    G  +PP
Sbjct: 459 TPSSSPPLTPNTICGLIAPP 478


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 201 SSTGTPWTTSNGPHNMNSKTDFA*FNDTARSSCRTSFRSGL 79
           +STGTP  TSNG + +++K   +      +S C T  R G+
Sbjct: 224 TSTGTPKCTSNGLYCVHNKDCCS--GACYKSVCSTEIRVGV 262


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -2

Query: 197 PPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPVGPLLGVG*ASPP 66
           PP  +GP P +P+   P L  P  +    PP+  LLG G A+PP
Sbjct: 587 PPPPMGP-PPSPLAGGP-LGGPAGS---RPPLPNLLGFGGAAPP 625


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 408  PGLTSGVRNVMFDC 449
            PG+  GV +VMF+C
Sbjct: 960  PGVVEGVEHVMFEC 973


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 236 PSPASAVGTTPSRPPAHLGPRPTAPIT 156
           P+P    G    RPP ++GP  T   T
Sbjct: 181 PNPGMPPGPQMMRPPGNVGPPRTGTPT 207


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -2

Query: 230 PASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDS-TIQHAPPVGPLLGVG*ASPPAGAF 54
           PAS + T+    PA + P P API    + + P + T++ + P+ P  G+     P+ A 
Sbjct: 43  PASKMPTSYPSLPAPIVPSPGAPI----QQSRPQAVTVRSSAPMLPKGGLPPKGVPSSAS 98

Query: 53  RVLL 42
            V +
Sbjct: 99  PVYM 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,927
Number of Sequences: 2352
Number of extensions: 15212
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)