Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20898
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 36 0.034
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.034
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 33 0.24
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 33 0.24
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical pr... 32 0.42
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.74
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 31 0.74
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.74
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.98
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.98
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 0.98
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.98
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.7
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.7
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC006649-3|AAF39863.2| 260|Caenorhabditis elegans Hypothetical ... 30 1.7
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 2.3
U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect... 29 2.3
U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect... 29 2.3
U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein. 29 2.3
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.0
L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical pr... 29 3.9
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical ... 29 3.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 5.2
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 28 6.9
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 28 6.9
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 6.9
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 28 6.9
Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical p... 27 9.1
Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical pr... 27 9.1
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 27 9.1
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 27 9.1
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 9.1
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 9.1
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -2
Query: 287 TFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAP 108
T S TL T P + L SP S VGT+P+ P A+L TAP+ T P + +
Sbjct: 615 TTSPTLAPTSPTK--LPTSPPSTVGTSPTAP-ANLTTPTTAPVNPTSSTTAPTAPVNPTS 671
Query: 107 P 105
P
Sbjct: 672 P 672
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 221 AVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPV 102
+ GTT P G T + K T+P ST Q APPV
Sbjct: 518 STGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPV 557
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 248 PWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLP----DSTIQHAPPVGP 96
P LAP+ + + P+ PP+ +G PTAP T P ST PV P
Sbjct: 618 PTLAPTSPTKL---PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNP 669
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -2
Query: 287 TFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAP 108
T S TL T P + L SP S VGT+P+ P A+L TAP+ T P + +
Sbjct: 671 TTSPTLAPTSPTK--LPTSPPSTVGTSPTAP-ANLTTPTTAPVNPTSSTTAPTAPVNPTS 727
Query: 107 P 105
P
Sbjct: 728 P 728
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -2
Query: 263 TKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPV 102
TKPV + +P++ GTT P G T + K T+P ST Q APPV
Sbjct: 562 TKPVVTTNSVTPST--GTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPV 613
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 248 PWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLP----DSTIQHAPPVGP 96
P LAP+ + + P+ PP+ +G PTAP T P ST PV P
Sbjct: 674 PTLAPTSPTKL---PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNP 725
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = +1
Query: 31 PMRNKSTRNA----PAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGG 198
PM ST A P GG + T G GA + G G M A+G GP GG
Sbjct: 220 PMGGSSTMTAVGGAPIGGSSTMTAVGGAPRGASTMTAVGGAPGGASTMTAMGGGPSAFGG 279
Query: 199 REGVVPTALAGLGASHGLT 255
+ G G G T
Sbjct: 280 APPPPSGSAMGGGGGGGAT 298
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAGLG 237
AP GG + T G GA + G G M AVG P G V A +G
Sbjct: 126 APVGGSSTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGGGSTMTAVGGAPSGAS 185
Query: 238 ASHGLTG 258
+ G
Sbjct: 186 TMTAVGG 192
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAG 231
AP GG + T G GA + G G M A+G PR A V + G
Sbjct: 166 APMGGGSTMTAVGGAPSGASTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGG 223
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAG 231
AP G P GG+ + G G M A+G PR A V + G
Sbjct: 113 APRGASTMTAVGGAPVGGSSTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGG 170
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +1
Query: 85 TPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAGLGAS 243
TP P GG+ + G G M AVG P GG + A GAS
Sbjct: 95 TPPAAPAGGSSTMTAVGGAPRGASTMTAVGGAP--VGGSSTMTAVGGAPSGAS 145
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = -1
Query: 267 SDQTGKTVARSKSSQRCRDNSLSSTGTPWTTSNGPHNMNSKTDFA*FNDTARSSCRTSFR 88
S +G TV+ + + S+T P TTS+GP ++ +T + S T+
Sbjct: 476 STSSGSTVSTTSGQSTSSGTTKSTTSGP-TTSSGPSTVSERTLSTTSGPSTTSGPSTTSG 534
Query: 87 SGLSFSPGRSVSS 49
S +S +PG S +S
Sbjct: 535 STVSTTPGASTTS 547
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 314 RNIRCSCSKTFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTL 135
RN+ CS K + ++PW S+V T P P +L P P P +P L+
Sbjct: 81 RNLSCSKPKITPVWKAPSAFLKPWSPRKRFSSVETNPGTPRIYLPPPPRPPP--VPPLSP 138
Query: 134 PD-STIQHA 111
P+ I HA
Sbjct: 139 PERPDIPHA 147
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -2
Query: 266 LTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPVGPLLG 87
L + + P +P ++ TT + P + +P+T P +TLP ++ A P GP+L
Sbjct: 2166 LEQGIGPVGTSAPVASTSTTNTPSPTN-----QSPVTQAPPVTLPPPSVATAGPTGPILT 2220
Query: 86 VG*AS--PPAGA 57
V S P +GA
Sbjct: 2221 VVPVSSAPTSGA 2232
>Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical
protein ZC455.1 protein.
Length = 681
Score = 31.9 bits (69), Expect = 0.42
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Frame = +2
Query: 11 EPLNSLCRCAIRALETLLPGE---KLSPL-LKE-----------VLQEERAVSLNQAKSV 145
+ L LCR A+RAL TLL + K P+ L+ +LQE+++ SL +AK+V
Sbjct: 545 DELVGLCRYALRALCTLLHHKMDGKAPPIQLRSRFSRALSACAVLLQEDKSNSLTKAKNV 604
Query: 146 LEFMLWGPLDVVQGVPVDERELSLQRWLDLERA 244
+E LW G + E ++ W+D RA
Sbjct: 605 MELALW------SGGEHFKNEQDVKIWIDTARA 631
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -1
Query: 270 RSDQTGKTVARSKSSQRCRDNSLSSTGTPWTTSNGPHNMNSKTDFA*FNDTARSSCRTSF 91
+ G TVA S +S + SSTGT +TS+G + S + +A S ++
Sbjct: 1494 QGSSAGSTVASSTASPAASSTAPSSTGTMSSTSSG--TVGSTISESSTTASASSQTGSTV 1551
Query: 90 RSGLSFSPGRSVSSA 46
G S + G S SSA
Sbjct: 1552 TMGSSSTSGVSTSSA 1566
Score = 27.5 bits (58), Expect = 9.1
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = -1
Query: 267 SDQTGKTVARSKSSQRCRDNSLSSTGTP-WTTSNGP---HNMNSKTDFA*FNDTARSSCR 100
S QTG TV SS S +S+G P +TS G + S T + TA SS
Sbjct: 1710 SSQTGSTVTMGSSSTSGVSTSSASSGQPQMSTSQGSSAGSTVVSSTASPAASSTAPSSTG 1769
Query: 99 TSFRSGLSFSPGRSVSSALIAHRQREFRGSSV 4
T S S + G ++S + A GS+V
Sbjct: 1770 T-MSSTSSGTVGSTMSQSSTAASTTSHTGSTV 1800
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Frame = +1
Query: 31 PMRNKSTRNA----PAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGG 198
PM ST A P GG + T G G + G G M A+G GP GG
Sbjct: 114 PMGGSSTMTAVGGAPIGGSSTMTAVGGAPRGVSTMTAVGGAPGGASTMTAMGGGPSAFGG 173
Query: 199 REGVVPTALAGLGASHGLT 255
+ G G G T
Sbjct: 174 APPPPSGSAMGGGGGGGAT 192
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAGLG 237
AP GG + T G GA + G G M AVG P G V A +G
Sbjct: 20 APVGGSSTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGGGSTMTAVGGAPSGAS 79
Query: 238 ASHGLTG 258
+ G
Sbjct: 80 TMTAVGG 86
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAG 231
AP GG + T G GA + G G M A+G PR A V + G
Sbjct: 60 APMGGGSTMTAVGGAPSGASTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGG 117
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTALAG 231
AP G P GG+ + G G M A+G PR A V + G
Sbjct: 7 APRGASTMTAVGGAPVGGSSTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGG 64
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = -2
Query: 263 TKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDS-----TIQHAPPVG 99
++P +P + PS S PS P + P P+ P + P T P S I PP G
Sbjct: 563 SEPAKPSM-PSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPNAIPEGPPPG 621
Query: 98 PLLGVG*ASPP 66
P + V A PP
Sbjct: 622 PDVPVMIALPP 632
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 251 RPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPV 102
RP P P P +P P+P P P LTLP Q+ PP+
Sbjct: 2028 RPQFRPQPQPRPQPQP-QPQPQPQPQPQQPYIQRPALTLPFQQPQYPPPI 2076
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 25 PLPMRNKSTRNAPAGGEAQPTPKRGPTGGACCI 123
P+P RN++TR A G E P P G CC+
Sbjct: 73 PVPPRNRTTRQAYGGPEVNPAPNLQCEG--CCL 103
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 25 PLPMRNKSTRNAPAGGEAQPTPKRGPTGGACCI 123
P+P RN++TR A G E P P G CC+
Sbjct: 68 PVPPRNRTTRQAYGGPEVNPAPNLQCEG--CCL 98
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 275 TLVLTKPVRPWLA-PSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPP 105
T T P P A P+ +GT+P+ P A+L TAP+ T P + + P
Sbjct: 495 TTTNTPPANPTTATPTTVGTIGTSPTAP-ANLTTPTTAPVNPTSSTTAPTAPVNPTSP 551
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 25 PLPMRNKSTRNAPAGGEAQPTPKRGPTGGACCI 123
P+P RN++TR A G E P P G CC+
Sbjct: 68 PVPPRNRTTRQAYGGPEVNPAPNLQCEG--CCL 98
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 1975 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 2011
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 1997 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 2033
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 818 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 854
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 796 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 832
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 1975 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 2011
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 275 TLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAP 162
TLV P ++AP PAS++ PSRP ++ R AP
Sbjct: 1997 TLVRVAPAENFVAPVPASSI-AAPSRPNQNVLDRVIAP 2033
>AC006649-3|AAF39863.2| 260|Caenorhabditis elegans Hypothetical
protein H01M10.2 protein.
Length = 260
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 281 SCTLVLTKPVRPWLAPSPASAVGTTPSRPP 192
SCT + P+ P +AP P + + +P PP
Sbjct: 15 SCTPSFSAPLTPAVAPQPINIISNSPPLPP 44
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 269 VLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLP 132
VL KP P P S GT ++ PA+ PRP P P + P
Sbjct: 342 VLAKPT-PMQTPMTPSFRGTNAAQSPANAPPRPPPPRPAAPSVESP 386
>U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect
sterile protein3, isoform b protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 174 SNGPHNMNSKTDFA*FNDTARSSCRTSFRSGLSFSPGRS 58
S+ HN + D + F+ S RT+ +SG+S PG S
Sbjct: 358 SSNTHNYFDRPDISKFSPWQPRSRRTTLKSGISVEPGTS 396
>U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect
sterile protein3, isoform a protein.
Length = 754
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 174 SNGPHNMNSKTDFA*FNDTARSSCRTSFRSGLSFSPGRS 58
S+ HN + D + F+ S RT+ +SG+S PG S
Sbjct: 358 SSNTHNYFDRPDISKFSPWQPRSRRTTLKSGISVEPGTS 396
>U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein.
Length = 754
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 174 SNGPHNMNSKTDFA*FNDTARSSCRTSFRSGLSFSPGRS 58
S+ HN + D + F+ S RT+ +SG+S PG S
Sbjct: 358 SSNTHNYFDRPDISKFSPWQPRSRRTTLKSGISVEPGTS 396
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = +1
Query: 58 APAGGEAQPTPKRGPT---GGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGV--VPTA 222
AP GG P P GGA + G G M AVG PR A V PT
Sbjct: 73 APVGGAPAAVPMGAPPPAGGGASTMTALGGAPSGASTMTAVGGAPRGASTMTAVGGAPTG 132
Query: 223 LAGLGASHG 249
+ + A G
Sbjct: 133 ASTMTAVGG 141
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -2
Query: 257 PVRPWLAPSPASAVGTTPSRPPAHLGPRPTA--PIT*IPKLTLPDSTIQHAPPVGPLLGV 84
P P P P G P PP+ GP P P + P PP P G
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 83 G*ASPP 66
G PP
Sbjct: 361 GMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -2
Query: 257 PVRPWLAPSPASAVGTTPSRPPAHLGPRPTA--PIT*IPKLTLPDSTIQHAPPVGPLLGV 84
P P P P G P PP+ GP P P + P PP P G
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 83 G*ASPP 66
G PP
Sbjct: 371 GMYPPP 376
>L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical
protein C30A5.10b protein.
Length = 438
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 258 TGKTVARSKSSQRCRDNSLSSTGTPWTTSNGPHNMNSKTDFA*FNDTARSSCRTSFRSG- 82
T T + Q + +T T WTTS P ++ + N + S TSF S
Sbjct: 98 TTSTTTMPPTYQTTTKSVKKNTETLWTTSKSPMKLSKNPKPSKLNQKSSKSSATSFDSAQ 157
Query: 81 LSFSPGRSVSSALIAHRQR 25
LS R ++ LI R
Sbjct: 158 LSVLSHRLLNDVLIIPSSR 176
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 258 TGKTVARSKSSQRCRDNSLSSTGTPWTTSNGPHNMNSKTDFA*FNDTARSSCRTSFRSG- 82
T T + Q + +T T WTTS P ++ + N + S TSF S
Sbjct: 98 TTSTTTMPPTYQTTTKSVKKNTETLWTTSKSPMKLSKNPKPSKLNQKSSKSSATSFDSAQ 157
Query: 81 LSFSPGRSVSSALIAHRQR 25
LS R ++ LI R
Sbjct: 158 LSVLSHRLLNDVLIIPSSR 176
>AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical
protein W09G10.6 protein.
Length = 621
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 294 LEDVQLYPRSDQTGKTVARSKSSQRCRDNSLSSTGTPWTTSNGPHNMNSK 145
LED +L + +TG A+S SS +D S SST S N N K
Sbjct: 380 LEDQKLSSKDLKTGVAGAQSSSSSDRKDQSSSSTDLNTDASQLELNQNQK 429
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 257 PVRPWLAPSPASAVGTTPSRPPAHLGPRPT 168
P P AP PA A G PPA+ P P+
Sbjct: 35 PPPPACAPPPAPACGGGAPPPPAYAAPAPS 64
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = -2
Query: 257 PVRPWLAPSPASAVGTTPSRPPAHLG----PRPT--APIT*IPKLTLPDSTIQHAPP 105
P+RP + P+P + T P+ PP+ L PRPT APIT ++ + ++T Q PP
Sbjct: 80 PIRPVVNPAPP--LPTLPTPPPSTLPPITYPRPTVGAPIT-TQQVLITETTTQ--PP 131
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 239 APSPASAVGTTPSRPPAHLG 180
+P PA A+G P PPA+ G
Sbjct: 440 SPGPAHAIGRVPMTPPANAG 459
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 329 AVDRTRNIRCSCSK-TFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT* 153
A +R RN + S T S T + PW A +V T SRP + + P P T
Sbjct: 404 AWNRLRNSSAAPSLLTTSVTADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTV 463
Query: 152 IP--KLTLPDSTIQ 117
P K LP +++
Sbjct: 464 SPASKPPLPPQSVE 477
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 329 AVDRTRNIRCSCSK-TFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHLGPRPTAPIT* 153
A +R RN + S T S T + PW A +V T SRP + + P P T
Sbjct: 404 AWNRLRNSSAAPSLLTTSVTADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTV 463
Query: 152 IP--KLTLPDSTIQ 117
P K LP +++
Sbjct: 464 SPASKPPLPPQSVE 477
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 254 VRPWLAPSPASAVGTTPSRPPAHL-GPRPTAPIT*IPKLTL 135
+ PW +PA +PS P AHL +P +PI + TL
Sbjct: 280 ILPWRPRTPAGHRDRSPSSPMAHLDNIQPPSPIQVVSNPTL 320
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 197 PPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPV-GPLLGVG*ASPPAG 60
PP+H P P P+ K +L D T + + PV G + G P G
Sbjct: 449 PPSHPPPAPLKPLNNNTKTSLNDRTSKISMPVAGSFIHTGHGDPLGG 495
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 267 SDQTGKTVARSKSSQRCRDNSLSSTGTPWTTS 172
S T T + S++CR SLSS+ TP TT+
Sbjct: 143 SSATPSTSSPVDESRQCRKRSLSSSTTPSTTA 174
>Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical
protein Y57G11C.38 protein.
Length = 317
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/88 (29%), Positives = 33/88 (37%)
Frame = -2
Query: 362 SRSTEASHIALAVDRTRNIRCSCSKTFSCTLVLTKPVRPWLAPSPASAVGTTPSRPPAHL 183
S S S A + + CSC+ F +L +K A +VGT R
Sbjct: 64 SSSANISCSAASTSSSIKSTCSCNSDFCNSLAKSKS---------ALSVGT---RGNGWW 111
Query: 182 GPRPTAPIT*IPKLTLPDSTIQHAPPVG 99
GPRP LTLPD + H G
Sbjct: 112 GPRPNTQQNITVNLTLPDRNLVHCEECG 139
>Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical
protein M01E5.3c protein.
Length = 560
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 70 GEAQPTPKR-GPTGGACCIVESGKVSFGIHV 159
G AQP P + GP G I+ G+V G HV
Sbjct: 243 GGAQPAPVQDGPVRGPPGIINQGRVVVGAHV 273
>Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical
protein M01E5.3b protein.
Length = 556
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 70 GEAQPTPKR-GPTGGACCIVESGKVSFGIHV 159
G AQP P + GP G I+ G+V G HV
Sbjct: 243 GGAQPAPVQDGPVRGPPGIINQGRVVVGAHV 273
>Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical
protein M01E5.3a protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 70 GEAQPTPKR-GPTGGACCIVESGKVSFGIHV 159
G AQP P + GP G I+ G+V G HV
Sbjct: 243 GGAQPAPVQDGPVRGPPGIINQGRVVVGAHV 273
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = +1
Query: 46 STRNAPAGGEAQPTPKR-GPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTA 222
STR +P+ A PTP R G + G SG A G +
Sbjct: 321 STRKSPSRKSASPTPSRKGSSAGGAA---SGTTGASASATSATSGGSASSDASRDKYTRP 377
Query: 223 LAGLGASHGLTGLVRTRVQLNVFEQLH 303
L AS TG + V L V Q H
Sbjct: 378 PIVLEASRSQTGRIGGSVVLEVQWQCH 404
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = +1
Query: 46 STRNAPAGGEAQPTPKR-GPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTA 222
STR +P+ A PTP R G + G SG A G +
Sbjct: 321 STRKSPSRKSASPTPSRKGSSAGGAA---SGTTGASASATSATSGGSASSDASRDKYTRP 377
Query: 223 LAGLGASHGLTGLVRTRVQLNVFEQLH 303
L AS TG + V L V Q H
Sbjct: 378 PIVLEASRSQTGRIGGSVVLEVQWQCH 404
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = +1
Query: 46 STRNAPAGGEAQPTPKR-GPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTA 222
STR +P+ A PTP R G + G SG A G +
Sbjct: 321 STRKSPSRKSASPTPSRKGSSAGGAA---SGTTGASASATSATSGGSASSDASRDKYTRP 377
Query: 223 LAGLGASHGLTGLVRTRVQLNVFEQLH 303
L AS TG + V L V Q H
Sbjct: 378 PIVLEASRSQTGRIGGSVVLEVQWQCH 404
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = +1
Query: 46 STRNAPAGGEAQPTPKR-GPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPTA 222
STR +P+ A PTP R G + G SG A G +
Sbjct: 321 STRKSPSRKSASPTPSRKGSSAGGAA---SGTTGASASATSATSGGSASSDASRDKYTRP 377
Query: 223 LAGLGASHGLTGLVRTRVQLNVFEQLH 303
L AS TG + V L V Q H
Sbjct: 378 PIVLEASRSQTGRIGGSVVLEVQWQCH 404
>Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical
protein M195.3 protein.
Length = 687
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = -3
Query: 424 PEVNPGGATNINVTIN---KR*PSLGVRRR----RTSPSPWTERGTSGAVARRRSAVPS 269
PE PG +TN NV+I ++ PS RR R+SPS T S A R + S
Sbjct: 593 PEERPGPSTNSNVSIEASVEKSPSSSTSRRSISIRSSPSIHTVSAISTAAPDSRPSTAS 651
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 97 GPTGGACCIVESGKVSFGIHVMGAVGRGPRCAGGRE 204
GP G C IV + G + GA G GGRE
Sbjct: 464 GPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 499
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 329 AVDRTRNIRCSCSKTFSCTLVLTKPVRPWLAPSPASAVGTTPS-RPPAHLGPRPTAPI 159
A+++ +N + S+T L P+ + P P V +PS PP L P P A +
Sbjct: 1131 AIEQIKNGVKTMSQTLDIKLPSADPLPNLVKPPPVQVVAPSPSVIPPPILPPPPPAGV 1188
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 329 AVDRTRNIRCSCSKTFSCTLVLTKPVRPWLAPSPASAVGTTPS-RPPAHLGPRPTAPI 159
A+++ +N + S+T L P+ + P P V +PS PP L P P A +
Sbjct: 1131 AIEQIKNGVKTMSQTLDIKLPSADPLPNLVKPPPVQVVAPSPSVIPPPILPPPPPAGV 1188
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 245 WLAPSPASAVGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPPV---GPLL 90
WL +P+SA PS P P PT + P +T P APPV GPL+
Sbjct: 743 WLT-TPSSAPSIVPSTPTISPAPLPTTGSSGGPDVTTP------APPVMVTGPLI 790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,354
Number of Sequences: 27780
Number of extensions: 352155
Number of successful extensions: 1308
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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