Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20891
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    41   5e-04
AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...    29   1.8  
Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    28   5.4  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +1

Query: 256 VAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYY 435
           V K+SP+I+ DS         E++L +ELSY   LG+  + I +    S   A IL+ + 
Sbjct: 124 VGKISPWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIELTRISSPRTAAILKKWI 183

Query: 436 ETSHHPSLIWACVP 477
            T +    +W  +P
Sbjct: 184 WTRNSRFTVWVQLP 197


>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 283 VDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETS--HHPS 456
           VD+    V+ + ++  + E ++C  L + A ++ I+GR S     IL+ Y   +  +HP+
Sbjct: 318 VDTTEEYVQYQQKEEYDLEAAFCDLLNLSARLLVINGRISFWYPVILENYCAENLPNHPA 377

Query: 457 --LIWACVPMLCSRTYRECMKMMKKR 528
             LI  C   L  +T R  +   K R
Sbjct: 378 MDLISNCEQPLTRKTSRRLLSYRKIR 403


>Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.3 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 38  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 211
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 38  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 211
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 38  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 211
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
            protein C32E8.11 protein.
          Length = 1927

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 439  TSHHPSLIWACVPMLCSRTYRECMKMMKKRKLG 537
            TS+ P+L   C  +LCS+ Y  C K++ K+  G
Sbjct: 1798 TSNVPTLCLVCGTILCSQAYC-CQKIINKQSYG 1829


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 394 RESNNLARILQTYYETSHHPSLI 462
           R +NNL +  Q ++++ HHPSLI
Sbjct: 844 RPNNNLNQQQQHHHQSHHHPSLI 866


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 394 RESNNLARILQTYYETSHHPSLI 462
           R +NNL +  Q ++++ HHPSLI
Sbjct: 910 RPNNNLNQQQQHHHQSHHHPSLI 932


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,940,949
Number of Sequences: 27780
Number of extensions: 298109
Number of successful extensions: 616
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)