Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20890
(816 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.84
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 25 1.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 4.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.5
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.0 bits (52), Expect = 0.84
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 118 GWLVELLEKKDGNIAAVLDLLTPVNPKI 201
G L+ DG ++++D+ TPVN K+
Sbjct: 915 GELLSSCVSNDGGCSSLVDVSTPVNKKV 942
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 566 KLVHLDKSAKCRINFNYTNKKTFTQKK 646
K +L SA N NY N K FTQ K
Sbjct: 258 KTQNLYYSAMSSHNLNYVNTKQFTQGK 284
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +3
Query: 378 LLFNNNYYCFFINSRDVINIHIV 446
L+ NY C + ++DV+ H++
Sbjct: 374 LIHAGNYTCHAVRNQDVVQTHVL 396
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 605 NFNYTNKKTFTQKKSANSTLKLEFRVLLFE 694
N+NY+N + + N+ KL + + E
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,868
Number of Sequences: 438
Number of extensions: 3772
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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