Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20886
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021964-1|AAX94785.1|  387|Drosophila melanogaster GH04763p pro...   119   2e-27
AE013599-3717|AAF47089.1|  372|Drosophila melanogaster CG11183-P...   119   2e-27
AE014134-2923|AAN11001.1|  232|Drosophila melanogaster CG31787-P...    29   2.4  
BT011389-1|AAR96181.1|  232|Drosophila melanogaster AT29354p pro...    28   5.6  
AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p pro...    28   5.6  
AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil ...    28   5.6  
AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB...    28   5.6  
AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA...    28   5.6  
AY061188-1|AAL28736.1|  321|Drosophila melanogaster LD15209p pro...    28   7.4  
AE014298-898|AAF46166.1|  321|Drosophila melanogaster CG3918-PA ...    28   7.4  

>BT021964-1|AAX94785.1|  387|Drosophila melanogaster GH04763p
           protein.
          Length = 387

 Score =  119 bits (287), Expect = 2e-27
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   YAREIVDSATHVALYTFE--ENEWEKTNIEGALFVYSRNGEPYHSLVIMNRLNTNNLIEP 176
           YA+EIVDS++HVA YTF   +NEWEKT++EGA F+Y RN EP+HS+ I NRLNT + +EP
Sbjct: 35  YAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFVEP 94

Query: 177 VSKGIELQLKEPFLLYRNAKCRIYGIGF 260
           ++  +ELQ + PFLLYRN + RI G  F
Sbjct: 95  ITGSLELQSQPPFLLYRNERSRIRGFWF 122



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 257 FYDKDECVRVATKLNTLVKESIKQSQGETMPQNSV-YNSSTTSTQSIDIFSMLSKAQDDF 433
           FY+ +EC R++  +N L+K   + + G+     S        S+Q   IF+ML+KAQ D+
Sbjct: 122 FYNSEECDRISGLVNGLLKSKDQGTNGQAQRHVSAPQQPKQDSSQPASIFNMLTKAQKDY 181

Query: 434 NSNKGVAGTKSES 472
           N+       K+ S
Sbjct: 182 NAQVSGGQPKTPS 194


>AE013599-3717|AAF47089.1|  372|Drosophila melanogaster CG11183-PA
           protein.
          Length = 372

 Score =  119 bits (287), Expect = 2e-27
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   YAREIVDSATHVALYTFE--ENEWEKTNIEGALFVYSRNGEPYHSLVIMNRLNTNNLIEP 176
           YA+EIVDS++HVA YTF   +NEWEKT++EGA F+Y RN EP+HS+ I NRLNT + +EP
Sbjct: 20  YAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFVEP 79

Query: 177 VSKGIELQLKEPFLLYRNAKCRIYGIGF 260
           ++  +ELQ + PFLLYRN + RI G  F
Sbjct: 80  ITGSLELQSQPPFLLYRNERSRIRGFWF 107



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 257 FYDKDECVRVATKLNTLVKESIKQSQGETMPQNSV-YNSSTTSTQSIDIFSMLSKAQDDF 433
           FY+ +EC R++  +N L+K   + + G+     S        S+Q   IF+ML+KAQ D+
Sbjct: 107 FYNSEECDRISGLVNGLLKSKDQGTNGQAQRHVSAPQQPKQDSSQPASIFNMLTKAQKDY 166

Query: 434 NSNKGVAGTKSES 472
           N+       K+ S
Sbjct: 167 NAQVSGGQPKTPS 179


>AE014134-2923|AAN11001.1|  232|Drosophila melanogaster CG31787-PA
           protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 341 FRLATVLWTLSLMCSTSWPLARTRPYHKTYTVNAALG 231
           FR+A V+W L L+       +   P++K  TV A  G
Sbjct: 2   FRIARVIWLLQLLLLLDLKFSNAEPHNKQLTVFAEAG 38


>BT011389-1|AAR96181.1|  232|Drosophila melanogaster AT29354p
           protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 341 FRLATVLWTLSLMCSTSWPLARTRPYHKTYTVNAALG 231
           FR+A V+W L L+           P++K  TV A  G
Sbjct: 2   FRIARVIWLLQLLLLLDLKFFNAEPHNKQLTVFAEAG 38


>AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p
           protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  ALFVYSRNGEPYHSLVIMNRLNT-NNLIEPVSKGIELQLKEPFLLYRNA 233
           ALF  ++ G  YH+ +  N LN   NL   ++K  + +L+E   LYR A
Sbjct: 576 ALFPQAKPGVSYHARIAPNHLNVFINLANLIAKN-QTRLEEADHLYRQA 623


>AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil Y
           protein protein.
          Length = 939

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +2

Query: 218 TIS*RQVPHLRYRFYDKDECVRVATKLNTLVKESIKQSQGETMPQNSVYNSSTTSTQSI 394
           T+  R++ ++  R Y   E +      N +VKE  + S   T   N  Y S+T +TQS+
Sbjct: 821 TLDFRELTYMHKRIYAAAENILPGCLFNMIVKEMTRFSC--TSTDNRQYASNTLNTQSL 877


>AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB,
           isoform B protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  ALFVYSRNGEPYHSLVIMNRLNT-NNLIEPVSKGIELQLKEPFLLYRNA 233
           ALF  ++ G  YH+ +  N LN   NL   ++K  + +L+E   LYR A
Sbjct: 576 ALFPQAKPGVSYHARIAPNHLNVFINLANLIAKN-QTRLEEADHLYRQA 623


>AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA,
           isoform A protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  ALFVYSRNGEPYHSLVIMNRLNT-NNLIEPVSKGIELQLKEPFLLYRNA 233
           ALF  ++ G  YH+ +  N LN   NL   ++K  + +L+E   LYR A
Sbjct: 576 ALFPQAKPGVSYHARIAPNHLNVFINLANLIAKN-QTRLEEADHLYRQA 623


>AY061188-1|AAL28736.1|  321|Drosophila melanogaster LD15209p
           protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 311 KESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNKGVAGTKSES 472
           K+S ++    T   +S  +SS++S+ S    S  S + DD + +   +   SES
Sbjct: 196 KKSKRRRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSES 249


>AE014298-898|AAF46166.1|  321|Drosophila melanogaster CG3918-PA
           protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 311 KESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNKGVAGTKSES 472
           K+S ++    T   +S  +SS++S+ S    S  S + DD + +   +   SES
Sbjct: 196 KKSKRRRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSES 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,866,226
Number of Sequences: 53049
Number of extensions: 396330
Number of successful extensions: 994
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)