Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20885
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 83 2e-16
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 83 2e-16
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 75 5e-14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 64 7e-11
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 64 7e-11
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 64 7e-11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 64 7e-11
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 64 7e-11
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 44 8e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 44 8e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 44 8e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 44 8e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 44 8e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 44 8e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 44 8e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 1e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 39 0.003
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.003
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.004
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.004
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 36 0.029
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.029
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.038
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.038
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 36 0.038
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 34 0.12
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 34 0.12
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.15
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 33 0.27
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.27
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.27
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.27
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.27
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 33 0.27
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.27
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.36
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 32 0.47
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.47
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.47
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 32 0.47
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 31 0.62
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.62
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.9
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.9
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 2.5
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.5
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 2.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 3.3
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 3.3
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 4.4
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 29 4.4
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 29 4.4
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 4.4
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 4.4
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 4.4
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 4.4
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 7.7
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 28 7.7
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 28 7.7
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 7.7
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
Query: 433 GK-IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K +FVGGL S+ S+ ++R+ F +FG P KQ TK R
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 516 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQ 188
Query: 433 GKIFVG 450
GK F G
Sbjct: 189 GKRFPG 194
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 104 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDH 253
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L H
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSH 48
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 659
+ + ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 55 VAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGG+S E++++++ + F+++G
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYG 53
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 188 DDRKLFVGGLSWETTDKELRDHLE 259
+++K+FVGGL + ++++LR H E
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFE 131
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
Query: 433 GK-IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K +FVGGL S+ S+ ++R+ F +FG P KQ TK R
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 516 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQ 188
Query: 433 GKIFVG 450
GK F G
Sbjct: 189 GKRFPG 194
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 104 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDH 253
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L H
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSH 48
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 659
+ + ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 55 VAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGG+S E++++++ + F+++G
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYG 53
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 188 DDRKLFVGGLSWETTDKELRDHLE 259
+++K+FVGGL + ++++LR H E
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFE 131
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 74.9 bits (176), Expect = 5e-14
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------ 414
FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR 124
Query: 415 ---KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
K + K+F+GGLS+ + ++++ +F +G
Sbjct: 125 TQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 531 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 179 GRDDDRKLFVGGLSWETTDKELRDH 253
G D K+F+GGLSW+TT + LRD+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDY 64
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 534 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 379 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
E +N D GK+F+GGLS + + + +R++F FG
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFG 69
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 74.9 bits (176), Expect = 5e-14
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------ 414
FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR 124
Query: 415 ---KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
K + K+F+GGLS+ + ++++ +F +G
Sbjct: 125 TQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 531 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 179 GRDDDRKLFVGGLSWETTDKELRDH 253
G D K+F+GGLSW+TT + LRD+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDY 64
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 534 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 379 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
E +N D GK+F+GGLS + + + +R++F FG
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFG 69
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
+ +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 433 GK-----------IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K ++V G+ + ++D + +F+++G K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+ D
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD 103
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 140 VTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 128 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRD 250
AENG GD+ S E ++ RK+FVGGL+ TTD +R+
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMRE 41
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
+ +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 64
Query: 433 GK-----------IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K ++V G+ + ++D + +F+++G K L K K R
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+ D
Sbjct: 11 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD 65
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 102 VTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
+ +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 64
Query: 433 GK-----------IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K ++V G+ + ++D + +F+++G K L K K R
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+ D
Sbjct: 11 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD 65
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 102 VTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
+ +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 433 GK-----------IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K ++V G+ + ++D + +F+++G K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+ D
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD 103
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 140 VTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 128 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRD 250
AENG GD+ S E ++ RK+FVGGL+ TTD +R+
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMRE 41
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
+ +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 433 GK-----------IFVGGLSSEISDDEIRNFFSEFGIS*KWRCPLTKQRTKER 558
K ++V G+ + ++D + +F+++G K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+ D
Sbjct: 49 ITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD 103
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 510 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 674
+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 140 VTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 128 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRD 250
AENG GD+ S E ++ RK+FVGGL+ TTD +R+
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMRE 41
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 408
F YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 45 FKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 507 NILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 665
+I V M +D +GF ITF+S+ N ++ I G VDV+ P
Sbjct: 50 SIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 405
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
D + R K+F+G LS + +++ +R F++FG
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 69 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 34.3 bits (75), Expect = 0.088
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K+F+GGLS + +D+++ N+FS++G
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWG 73
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 540 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 86 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 194 RKLFVGGLSWETTDKELRDH 253
RKLF+GGLS +TTD++L ++
Sbjct: 49 RKLFIGGLSHDTTDEQLGNY 68
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 89 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 34.3 bits (75), Expect = 0.088
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K+F+GGLS + +D+++ N+FS++G
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWG 93
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 540 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 106 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 194 RKLFVGGLSWETTDKELRDH 253
RKLF+GGLS +TTD++L ++
Sbjct: 69 RKLFIGGLSHDTTDEQLGNY 88
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 90 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 34.3 bits (75), Expect = 0.088
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K+F+GGLS + +D+++ N+FS++G
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWG 94
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 540 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 668
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 107 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 194 RKLFVGGLSWETTDKELRDH 253
RKLF+GGLS +TTD++L ++
Sbjct: 70 RKLFIGGLSHDTTDEQLGNY 89
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDH 113
Query: 433 GKIFVGGLSSEISDDEIRNFFSE 501
+ + E +DDE + + E
Sbjct: 114 VEEYKVPKYKEDADDETKRLWEE 136
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +1
Query: 265 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 432
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 433 ---GKIFVGGLSSEISDDEIRNFFSEFGI 510
IFVG L E+ + + + FS FG+
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGV 125
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 250 SFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
+F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 119 TFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +1
Query: 265 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 432
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 433 ---GKIFVGGLSSEISDDEIRNFFSEFGI 510
IFVG L E+ + + + FS FG+
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGV 135
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 250 SFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
+F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 129 TFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 408
F A G + SI V D T S G+A++ F+ P ++ M ++ K + D
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
P ++ G IF+ L I + I + FS FG
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 277 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 274 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 408
F A G + SI V D T S G+A++ F+ P ++ M ++ K + D
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
P ++ G IF+ L I + I + FS FG
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 375
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +1
Query: 307 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSE 465
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 466 ISDDEIRNFFSE 501
+ + ++R F +
Sbjct: 270 VDEHQLRKVFGD 281
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 316 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 429
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 483 QKLLQ*IWNILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 653
QK + I ++ E+ K+ KGF F+ S N +L P+ I G+ DVK
Sbjct: 190 QKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVK 245
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 433 GK------IFVGGLSSEISDDEIRNFFSEFG 507
GK +FVGGL S + ++ F EFG
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 433 GK------IFVGGLSSEISDDEIRNFFSEFG 507
GK +FVGGL S + ++ F EFG
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 221
Query: 433 GK------IFVGGLSSEISDDEIRNFFSEFG 507
GK +FVGGL S + ++ F EFG
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 252
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 354
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 354
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 354
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 265 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 423
G +E++ + D +TG+ +GFAF+ FK S+ +A TI +K D + K
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITK 321
Score = 34.7 bits (76), Expect = 0.067
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 328 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 489
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 490 FFS 498
FFS
Sbjct: 265 FFS 267
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKVD-----PK 414
F + GEIES + D TG+S G+ F+ + + +++ V + + NK + P
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 415 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
+ + ++V G+ ++ E+ + F FG
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFG 152
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 35.1 bits (77), Expect = 0.051
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 408
F G + SI V D + S G+A++ F+ P ++ + I+ + + D
Sbjct: 77 FSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRD 136
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
P +A +G IF+ L I + + + FS FG
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
F ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 35.1 bits (77), Expect = 0.051
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 408
F G + SI V D + S G+A++ F+ P ++ + I+ + + D
Sbjct: 77 FSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRD 136
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
P +A +G IF+ L I + + + FS FG
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKAR 429
F G+I + + DP +G SRG+AF+ + E + H I+ K
Sbjct: 220 FEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIA 279
Query: 430 HGKIFVGGLSSEISDDEI 483
+ ++F+G + S DEI
Sbjct: 280 NTRLFIGNIPKTKSKDEI 297
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.038
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 384
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 385 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
+++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.038
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 384
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 385 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
+++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 408
F +G+IE V TD NT +SRG+ F+ K S ++ I+ +K +
Sbjct: 55 FEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 149 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHLE 259
+Q N+ G D K+FVGGL + T+DK L ++ E
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFE 56
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGGL SD + +F +FG
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFG 59
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 369
F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 354
F YGE+ + V D TG +GFA + F PE+
Sbjct: 299 FKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 402
F YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 23 FEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF 339
F A G + ++ + D TGR RGFAF+ F
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 357
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 45 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 357
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 190 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K+FVGGL S + + +I NFFS +G
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYG 112
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 351
FG +GEI ++ D +G SRGF FI F E
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI------- 390
+F +GE+ V D T +S+G+ F+ F ++ + +A G+ +
Sbjct: 154 TFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAAR 213
Query: 391 -NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
N+++ K KA + ++VG +S + +D ++R+ FS +G
Sbjct: 214 KNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYG 261
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +1
Query: 382 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFG 159
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 429
F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 430 HGKI 441
K+
Sbjct: 129 RRKL 132
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIRNFFSEFG 507
RH +FVG LSSE+ + ++R F FG
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFG 46
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIRNFFSEFG 507
RH +FVG LSSE+ + ++R F FG
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFG 56
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIRNFFSEFG 507
RH +FVG LSSE+ + ++R F FG
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFG 159
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIRNFFSEFG 507
RH +FVG LSSE+ + ++R F FG
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFG 127
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 405
F G++ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 66 FAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 164 SAEAPGRDDDRKLFVGGLSWETTDKELRDH 253
+AE + D R ++VG + W++T E+ +H
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEH 65
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 429
F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 430 HGKI 441
K+
Sbjct: 129 RRKL 132
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 173 APGRDDDRKLFVGGLSWETTDKELRDHLE 259
APG +D R +FV L + TT+ E+R +E
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQAIE 614
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Frame = +1
Query: 316 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 459
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 460 SEISDDEIRNFFSEFG 507
+ +DDE++ FS+FG
Sbjct: 692 FQATDDELKALFSKFG 707
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVF 339
F G + ++ + D TGR RGFAF+ F
Sbjct: 24 FSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
FG++ + + N + R K+ + + A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 433 GKIFVGGLSSEISDDEIRNFFSEFG 507
K+FVGG+S ++ I FF +FG
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFG 229
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 HGKIFVGGLSSEISDDEIRNFFSEFGI 510
H +F+GGL ++ +EI FSEFG+
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGV 344
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
FG++ + + N + R K+ + + A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 433 GKIFVGGLSSEISDDEIRNFFSEFG 507
K+FVGG+S ++ I FF +FG
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFG 229
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 HGKIFVGGLSSEISDDEIRNFFSEFGI 510
H +F+GGL ++ +EI FSEFG+
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGV 344
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
FG++ + + N + R K+ + + A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 433 GKIFVGGLSSEISDDEIRNFFSEFG 507
K+FVGG+S ++ I FF +FG
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFG 229
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 HGKIFVGGLSSEISDDEIRNFFSEFGI 510
H +F+GGL ++ +EI FSEFG+
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGV 344
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 412 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
K +RH +FVG L SEI ++R F +FG
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFG 156
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 430 HGKIFVGGLSSEISDDEIRNFFSEFGI 510
H +F+GGL ++ +EI FSEFG+
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGV 130
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 372
FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 196 FGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIRNFFSEFG 507
+FVG +S ++S+D IR+ FS+ G
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAG 42
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 516 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 659
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 253 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVD 408
F YG+I++I++ D TG +G+A + ++ + ++ + T N KVD
Sbjct: 75 FSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 507
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 161 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHLE 259
N AE P +D R LFVG +++ET++ +LR E
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFE 125
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 622 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 509
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 197 KLFVGGLSWETTDKELRDHLE 259
++FVGG TT+ ELR+H E
Sbjct: 67 RIFVGGFPTSTTETELREHFE 87
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 549 QRKGFCFITFESEQVVNDLLK-TPKR 623
Q KG+ FITFE+E ++ K TPK+
Sbjct: 104 QSKGYGFITFETEDQAEEIRKLTPKQ 129
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 194 RKLFVGGLSWETTDKELRD 250
RK+FVGG+ W+ T+ L+D
Sbjct: 295 RKIFVGGVPWDITEAALKD 313
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIFVGG+ +I++ +++ F EFG
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 197 KLFVGGLSWETTDKELRDHLE 259
++FVGG TT+ ELR+H E
Sbjct: 68 RIFVGGFPTSTTETELREHFE 88
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 549 QRKGFCFITFESEQVVNDLLK-TPKR 623
Q KG+ FITFE+E ++ K TPK+
Sbjct: 105 QSKGYGFITFETEDQAEEIRKLTPKQ 130
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 74 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 199
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 74 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 199
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 364 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFG-IS*KWRCPLT 537
+M + + K P A+ + K+F+GGL ++S++++ F FG + W P
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDW--PRR 278
Query: 538 KQRTKERA 561
+ ERA
Sbjct: 279 PEHNAERA 286
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 256 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVDPK 414
G YG++ + + DP +G A + F ++ + ++ H NNK+V+ K
Sbjct: 387 GHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIK 443
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIF+GGL + +++D+++ FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIF+GGL + +++D+++ FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIF+GGL + +++D+++ FG
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFG 290
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIRNFFSEFG 507
KIF+GGL + +++D+++ FG
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFG 293
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 376 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGIS*KWR 525
G+HT + + K +FVG +S + SD+ IR +E G W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 376 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGIS*KWR 525
G+HT + + K +FVG +S + SD+ IR +E G W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 95 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 193
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 95 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 193
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVF 339
+F YG+I +++ D + +S+GF F+ F
Sbjct: 38 TFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 250 SFGAYGEIESINVKTDPNTGRSRGFAFIVF 339
+F YG+I +++ D + +S+GF F+ F
Sbjct: 38 TFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 313 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 432
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,226,194
Number of Sequences: 27780
Number of extensions: 342539
Number of successful extensions: 1330
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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